RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 GLMPQ8WWB7 406 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 DAZ1Q9NQZ3 744 aaKnown RBP6.78□□□□□ -1.32
HPS4-204ENST00000422379 TRAV9-1A0A075B6T8 112 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 IGHV7-4-1A0A0J9YVY3 117 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 C2orf70A6NJV1 201 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 LGALS9O00182 355 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 CHEK1O14757 476 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 NDUFA11Q86Y39 141 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 OR8I2Q8N0Y5 310 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 CMTM2Q8TAZ6 248 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 FMC1Q96HJ9 113 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 GPR82Q96P67 336 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 METTL26Q96S19 204 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 MLST8Q9BVC4 326 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 SMPXQ9UHP9 88 aa6.78□□□□□ -1.32
HPS4-204ENST00000422379 TRAV8-1A0A0A6YYK1 113 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 IFITM10A6NMD0 228 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 K7EMT4 169 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 CA1P00915 261 aaPredicted RBP6.77□□□□□ -1.33
HPS4-204ENST00000422379 LTAP01374 205 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 S100A2P29034 98 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 FAM106AQ4KMX7 169 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 GFI1BQ5VTD9 330 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 IGFL4Q6B9Z1 124 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 PRR27Q6MZM9 219 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 C16orf54Q6UWD8 224 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 GOLT1AQ6ZVE7 132 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 FAM231DQ6ZW35 169 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 DPF1Q92782 380 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 SMIM12Q96EX1 92 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 RHPN1-AS1Q9BWJ2 59 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 NBEAL1Q6ZS30 2694 aa6.77□□□□□ -1.33
HPS4-204ENST00000422379 ZNF705GA8MUZ8 300 aaPredicted RBP6.76□□□□□ -1.33
HPS4-204ENST00000422379 IGLV2-11P01706 119 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 CSN3P07498 182 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 RPL7P18124 248 aaKnown RBP6.76□□□□□ -1.33
HPS4-204ENST00000422379 TCL1AP56279 114 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 PDE6HQ13956 83 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 Q86TA4 180 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 LYPD1Q8N2G4 141 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 NUDT10Q8NFP7 164 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 OR9G4Q8NGQ1 327 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 NUDT11Q96G61 164 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 TRAPPC1Q9Y5R8 145 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 SMIM27A0A1W2PRY6 76 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 M0R3E3 92 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 FRMD6-AS1P0C7T7 363 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 CBLN1P23435 193 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 HLA-DMBP28068 263 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 LINC00322Q6ZN03 302 aaPredicted RBP6.76□□□□□ -1.33
HPS4-204ENST00000422379 HIST3H2BBQ8N257 126 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 UFC1Q9Y3C8 167 aa6.76□□□□□ -1.33
HPS4-204ENST00000422379 DNAH3Q8TD57 4116 aa6.75□□□□□ -1.33
HPS4-204ENST00000422379 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
HPS4-204ENST00000422379 GATCO43716 136 aaKnown RBP6.75□□□□□ -1.33
HPS4-204ENST00000422379 PDZD11Q5EBL8 140 aa6.75□□□□□ -1.33
HPS4-204ENST00000422379 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.75□□□□□ -1.33
HPS4-204ENST00000422379 LINC00528Q8N1L1 170 aa6.75□□□□□ -1.33
HPS4-204ENST00000422379 LINC00482Q8N8I6 264 aa6.75□□□□□ -1.33
HPS4-204ENST00000422379 TMEM158Q8WZ71 300 aa6.75□□□□□ -1.33
HPS4-204ENST00000422379 MDFIQ99750 246 aa6.75□□□□□ -1.33
HPS4-204ENST00000422379 GSN-AS1Q9NRJ2 163 aa6.75□□□□□ -1.33
HPS4-204ENST00000422379 IGKV3-7A0A075B6H7 116 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 TRBV6-1A0A0K0K1D8 114 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 C19orf71A6NCJ1 209 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 SPINK4O60575 86 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 C1orf194Q5T5A4 169 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 PRNTQ86SH4 94 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 TMEM183AQ8IXX5 376 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 TMEM75Q8N9X5 138 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 GRAMD2BQ96HH9 432 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 GPR61Q9BZJ8 451 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 AAMDCQ9H7C9 122 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 NOTCH1P46531 2555 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 XKRY2A2RUG3 117 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 IZUMO1RA6ND01 250 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 DIRC3C9JPN6 131 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 SOCS3O14543 225 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 PSG9Q00887 426 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 COA6Q5JTJ3 125 aaKnown RBP6.74□□□□□ -1.33
HPS4-204ENST00000422379 ZNF747Q9BV97 191 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 ZNF492Q9P255 531 aa6.74□□□□□ -1.33
HPS4-204ENST00000422379 A0A087X0K7 114 aa6.73□□□□□ -1.33
HPS4-204ENST00000422379 SNURFLB1AK76 121 aa6.73□□□□□ -1.33
HPS4-204ENST00000422379 K7EQM0 130 aa6.73□□□□□ -1.33
HPS4-204ENST00000422379 OVOL1O14753 267 aa6.73□□□□□ -1.33
HPS4-204ENST00000422379 DEFB1P60022 68 aa6.73□□□□□ -1.33
HPS4-204ENST00000422379 PSG3Q16557 428 aa6.73□□□□□ -1.33
HPS4-204ENST00000422379 MRPL54Q6P161 138 aaKnown RBP6.73□□□□□ -1.33
HPS4-204ENST00000422379 TCF24Q7RTU0 167 aa6.73□□□□□ -1.33
HPS4-204ENST00000422379 GBGT1Q8N5D6 347 aa6.73□□□□□ -1.33
HPS4-204ENST00000422379 RNF182Q8N6D2 247 aa6.73□□□□□ -1.33
HPS4-204ENST00000422379 C20orf173Q96LM9 149 aa6.73□□□□□ -1.33
HPS4-204ENST00000422379 ASCL2Q99929 193 aa6.73□□□□□ -1.33
HPS4-204ENST00000422379 MRPL18Q9H0U6 180 aaKnown RBP6.73□□□□□ -1.33
HPS4-204ENST00000422379 RPP21Q9H633 154 aaKnown RBP6.73□□□□□ -1.33
HPS4-204ENST00000422379 PSG8Q9UQ74 426 aa6.73□□□□□ -1.33
HPS4-204ENST00000422379 A0A1W2PS18 150 aa6.72□□□□□ -1.33
HPS4-204ENST00000422379 ZNF785A8K8V0 405 aa6.72□□□□□ -1.33
HPS4-204ENST00000422379 ZNF253O75346 499 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms