RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 S100A10P60903 97 aa12.07□□□□□ -0.48
MSH6-203ENST00000420813 PDE6HQ13956 83 aa12.07□□□□□ -0.48
MSH6-203ENST00000420813 ATP6V1FQ16864 119 aa12.07□□□□□ -0.48
MSH6-203ENST00000420813 PRELID1Q9Y255 219 aa12.07□□□□□ -0.48
MSH6-203ENST00000420813 HIST1H1EP10412 219 aaKnown RBP12.06□□□□□ -0.48
MSH6-203ENST00000420813 HOXA5P20719 270 aa12.06□□□□□ -0.48
MSH6-203ENST00000420813 RAB32Q13637 225 aa12.06□□□□□ -0.48
MSH6-203ENST00000420813 TTC32Q5I0X7 151 aa12.06□□□□□ -0.48
MSH6-203ENST00000420813 AKAP14Q86UN6 197 aa12.06□□□□□ -0.48
MSH6-203ENST00000420813 UPK3BQ9BT76 320 aa12.06□□□□□ -0.48
MSH6-203ENST00000420813 Q9H8V8 135 aa12.06□□□□□ -0.48
MSH6-203ENST00000420813 C7orf71A4D174 169 aa12.05□□□□□ -0.48
MSH6-203ENST00000420813 C16orf90A8MZG2 172 aa12.05□□□□□ -0.48
MSH6-203ENST00000420813 M0R3E3 92 aa12.05□□□□□ -0.48
MSH6-203ENST00000420813 FGF7P21781 194 aa12.05□□□□□ -0.48
MSH6-203ENST00000420813 ZNF680Q8NEM1 530 aa12.05□□□□□ -0.48
MSH6-203ENST00000420813 C18orf15Q96N68 181 aa12.05□□□□□ -0.48
MSH6-203ENST00000420813 LINC00467Q9BRT7 94 aa12.05□□□□□ -0.48
MSH6-203ENST00000420813 A0A0J9YY99 117 aa12.04□□□□□ -0.48
MSH6-203ENST00000420813 KLLNB2CW77 178 aa12.04□□□□□ -0.48
MSH6-203ENST00000420813 NDUFB4O95168 129 aa12.04□□□□□ -0.48
MSH6-203ENST00000420813 FAM19A4Q96LR4 140 aa12.04□□□□□ -0.48
MSH6-203ENST00000420813 LINC00477Q96M19 166 aa12.04□□□□□ -0.48
MSH6-203ENST00000420813 Q9H3A6 140 aa12.04□□□□□ -0.48
MSH6-203ENST00000420813 TIMM9Q9Y5J7 89 aa12.04□□□□□ -0.48
MSH6-203ENST00000420813 A0A1W2PPQ1 181 aa12.03□□□□□ -0.48
MSH6-203ENST00000420813 CDK2AP2O75956 126 aa12.03□□□□□ -0.48
MSH6-203ENST00000420813 Q6ZTI0 123 aa12.03□□□□□ -0.48
MSH6-203ENST00000420813 C11orf72Q8NBR9 251 aa12.03□□□□□ -0.48
MSH6-203ENST00000420813 NPCDR1Q9BY65 106 aa12.03□□□□□ -0.48
MSH6-203ENST00000420813 TMPRSS5Q9H3S3 457 aa12.03□□□□□ -0.48
MSH6-203ENST00000420813 GPN1Q9HCN4 374 aaPredicted RBP12.03□□□□□ -0.48
MSH6-203ENST00000420813 MRPS16Q9Y3D3 137 aaKnown RBP12.03□□□□□ -0.48
MSH6-203ENST00000420813 ABCA13Q86UQ4 5058 aa12.02□□□□□ -0.48
MSH6-203ENST00000420813 HSPG2P98160 4391 aa12.02□□□□□ -0.49
MSH6-203ENST00000420813 ZNF324O75467 553 aaPredicted RBP12.02□□□□□ -0.49
MSH6-203ENST00000420813 NMBP08949 121 aa12.02□□□□□ -0.49
MSH6-203ENST00000420813 PYYP10082 97 aa12.02□□□□□ -0.49
MSH6-203ENST00000420813 CRISP2P16562 243 aa12.02□□□□□ -0.49
MSH6-203ENST00000420813 BTF3P20290 206 aaKnown RBP12.02□□□□□ -0.49
MSH6-203ENST00000420813 ERCC8Q13216 396 aa12.02□□□□□ -0.49
MSH6-203ENST00000420813 ESRGQ1W209 222 aa12.02□□□□□ -0.49
MSH6-203ENST00000420813 ANXA2RQ3ZCQ2 193 aa12.02□□□□□ -0.49
MSH6-203ENST00000420813 C9orf47Q6ZRZ4 202 aa12.02□□□□□ -0.49
MSH6-203ENST00000420813 EIF4E3Q8N5X7 224 aaKnown RBP12.02□□□□□ -0.49
MSH6-203ENST00000420813 AGPAT4-IT1Q9H0P7 198 aa12.02□□□□□ -0.49
MSH6-203ENST00000420813 AAMDCQ9H7C9 122 aa12.02□□□□□ -0.49
MSH6-203ENST00000420813 LRP1BQ9NZR2 4599 aa12.01□□□□□ -0.49
MSH6-203ENST00000420813 KRTAP1-5Q9BYS1 174 aa12.01□□□□□ -0.49
MSH6-203ENST00000420813 GSN-AS1Q9NRJ2 163 aa12.01□□□□□ -0.49
MSH6-203ENST00000420813 TRGV2A0A075B6R0 118 aa12□□□□□ -0.49
MSH6-203ENST00000420813 CD300CQ08708 224 aa12□□□□□ -0.49
MSH6-203ENST00000420813 BTN1A1Q13410 526 aa12□□□□□ -0.49
MSH6-203ENST00000420813 GCSAMLQ5JQS6 135 aa12□□□□□ -0.49
MSH6-203ENST00000420813 EXOC3-AS1Q8N2X6 119 aa12□□□□□ -0.49
MSH6-203ENST00000420813 BLNKQ8WV28 456 aa12□□□□□ -0.49
MSH6-203ENST00000420813 SLC25A2Q9BXI2 301 aa12□□□□□ -0.49
MSH6-203ENST00000420813 MED28Q9H204 178 aa12□□□□□ -0.49
MSH6-203ENST00000420813 GPX1P07203 203 aa11.99□□□□□ -0.49
MSH6-203ENST00000420813 TCL1AP56279 114 aa11.99□□□□□ -0.49
MSH6-203ENST00000420813 ICAM4Q14773 271 aa11.99□□□□□ -0.49
MSH6-203ENST00000420813 IBA57Q5T440 356 aaKnown RBP11.99□□□□□ -0.49
MSH6-203ENST00000420813 TMEM78Q5T7P6 136 aa11.99□□□□□ -0.49
MSH6-203ENST00000420813 OR5C1Q8NGR4 320 aa11.99□□□□□ -0.49
MSH6-203ENST00000420813 VSIG2Q96IQ7 327 aa11.99□□□□□ -0.49
MSH6-203ENST00000420813 FAM167A-AS1Q96KT0 104 aa11.99□□□□□ -0.49
MSH6-203ENST00000420813 SLC25A31Q9H0C2 315 aa11.99□□□□□ -0.49
MSH6-203ENST00000420813 KCNIP2Q9NS61 270 aa11.99□□□□□ -0.49
MSH6-203ENST00000420813 FUT9Q9Y231 359 aa11.99□□□□□ -0.49
MSH6-203ENST00000420813 A0A096LPF7 62 aa11.98□□□□□ -0.49
MSH6-203ENST00000420813 TRGV1A0A0A0MS02 117 aa11.98□□□□□ -0.49
MSH6-203ENST00000420813 E5RGE8 158 aa11.98□□□□□ -0.49
MSH6-203ENST00000420813 SSNA1O43805 119 aa11.98□□□□□ -0.49
MSH6-203ENST00000420813 SPINK4O60575 86 aa11.98□□□□□ -0.49
MSH6-203ENST00000420813 RNASE4P34096 147 aaKnown RBP11.98□□□□□ -0.49
MSH6-203ENST00000420813 NHLH2Q02577 135 aa11.98□□□□□ -0.49
MSH6-203ENST00000420813 ZFAND2AQ8N6M9 145 aa11.98□□□□□ -0.49
MSH6-203ENST00000420813 THAP6Q8TBB0 222 aa11.98□□□□□ -0.49
MSH6-203ENST00000420813 KRTAP4-5Q9BYR2 181 aa11.98□□□□□ -0.49
MSH6-203ENST00000420813 TRBV7-9A0A0J9YWB2 115 aa11.97□□□□□ -0.49
MSH6-203ENST00000420813 NBEAP1P0C6P0 100 aa11.97□□□□□ -0.49
MSH6-203ENST00000420813 MIR17HGQ75NE6 70 aa11.97□□□□□ -0.49
MSH6-203ENST00000420813 MRPL32Q9BYC8 188 aaKnown RBP11.97□□□□□ -0.49
MSH6-203ENST00000420813 NMES1Q9C002 83 aa11.97□□□□□ -0.49
MSH6-203ENST00000420813 OR51M1Q9H341 326 aa11.97□□□□□ -0.49
MSH6-203ENST00000420813 ZNF492Q9P255 531 aa11.97□□□□□ -0.49
MSH6-203ENST00000420813 IGKV2-40A0A087WW87 121 aaPredicted RBP11.96□□□□□ -0.49
MSH6-203ENST00000420813 RGS13O14921 159 aa11.96□□□□□ -0.49
MSH6-203ENST00000420813 IGKV2D-40P01614 121 aaPredicted RBP11.96□□□□□ -0.49
MSH6-203ENST00000420813 FAM122CQ6P4D5 195 aa11.96□□□□□ -0.49
MSH6-203ENST00000420813 SPATA12Q7Z6I5 190 aa11.96□□□□□ -0.49
MSH6-203ENST00000420813 ST6GAL2Q96JF0 529 aa11.96□□□□□ -0.49
MSH6-203ENST00000420813 VGLL1Q99990 258 aa11.96□□□□□ -0.49
MSH6-203ENST00000420813 KLF12Q9Y4X4 402 aa11.96□□□□□ -0.49
MSH6-203ENST00000420813 IGHV1OR15-1A0A075B7D0 117 aa11.95□□□□□ -0.5
MSH6-203ENST00000420813 PRR9Q5T870 116 aa11.95□□□□□ -0.5
MSH6-203ENST00000420813 TCTE3Q8IZS6 198 aa11.95□□□□□ -0.5
MSH6-203ENST00000420813 FXYD5Q96DB9 178 aa11.95□□□□□ -0.5
MSH6-203ENST00000420813 PAXXQ9BUH6 204 aa11.95□□□□□ -0.5
MSH6-203ENST00000420813 WDR61Q9GZS3 305 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms