RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 C11orf94C9JXX5 98 aa14.32□□□□□ -0.12
RPUSD3-202ENST00000418713 K7EQM0 130 aa14.32□□□□□ -0.12
RPUSD3-202ENST00000418713 HMGB3O15347 200 aaKnown RBP14.32□□□□□ -0.12
RPUSD3-202ENST00000418713 RBMY1A1P0DJD3 496 aaKnown RBP14.32□□□□□ -0.12
RPUSD3-202ENST00000418713 RBMY1CP0DJD4 496 aa14.32□□□□□ -0.12
RPUSD3-202ENST00000418713 CT45A10P0DMU9 189 aa14.32□□□□□ -0.12
RPUSD3-202ENST00000418713 TAS2R60P59551 318 aa14.32□□□□□ -0.12
RPUSD3-202ENST00000418713 RBMY1FQ15415 496 aaKnown RBP14.32□□□□□ -0.12
RPUSD3-202ENST00000418713 BAP18Q8IXM2 172 aa14.32□□□□□ -0.12
RPUSD3-202ENST00000418713 SUN5Q8TC36 379 aa14.32□□□□□ -0.12
RPUSD3-202ENST00000418713 NIPSNAP3BQ9BS92 247 aa14.32□□□□□ -0.12
RPUSD3-202ENST00000418713 AGPAT4-IT1Q9H0P7 198 aa14.32□□□□□ -0.12
RPUSD3-202ENST00000418713 DIRC3C9JPN6 131 aa14.31□□□□□ -0.12
RPUSD3-202ENST00000418713 DEFB4AO15263 64 aa14.31□□□□□ -0.12
RPUSD3-202ENST00000418713 SPART-AS1P0CW21 52 aa14.31□□□□□ -0.12
RPUSD3-202ENST00000418713 DPPA3Q6W0C5 159 aa14.31□□□□□ -0.12
RPUSD3-202ENST00000418713 CCDC28AQ8IWP9 274 aa14.31□□□□□ -0.12
RPUSD3-202ENST00000418713 TMED6Q8WW62 240 aa14.31□□□□□ -0.12
RPUSD3-202ENST00000418713 hCG_2014768A0A024R1R8 64 aa14.3□□□□□ -0.12
RPUSD3-202ENST00000418713 GPX1P07203 203 aa14.3□□□□□ -0.12
RPUSD3-202ENST00000418713 ZNF138P52744 262 aa14.3□□□□□ -0.12
RPUSD3-202ENST00000418713 ZNF493Q6ZR52 646 aa14.3□□□□□ -0.12
RPUSD3-202ENST00000418713 IQCF2Q8IXL9 164 aa14.3□□□□□ -0.12
RPUSD3-202ENST00000418713 ZNF492Q9P255 531 aa14.3□□□□□ -0.12
RPUSD3-202ENST00000418713 LENEPQ9Y5L5 61 aa14.3□□□□□ -0.12
RPUSD3-202ENST00000418713 LOC102723971A0A1B0GUV8 181 aa14.29□□□□□ -0.12
RPUSD3-202ENST00000418713 A0A1W2PRE2 83 aa14.29□□□□□ -0.12
RPUSD3-202ENST00000418713 CRISP2P16562 243 aa14.29□□□□□ -0.12
RPUSD3-202ENST00000418713 ERCC8Q13216 396 aa14.29□□□□□ -0.12
RPUSD3-202ENST00000418713 FBLL1A6NHQ2 334 aaKnown RBP14.28□□□□□ -0.12
RPUSD3-202ENST00000418713 PMS2P11Q13670 270 aa14.28□□□□□ -0.12
RPUSD3-202ENST00000418713 LGALSLQ3ZCW2 172 aaPredicted RBP14.28□□□□□ -0.12
RPUSD3-202ENST00000418713 CEMP1Q6PRD7 247 aaPredicted RBP14.28□□□□□ -0.12
RPUSD3-202ENST00000418713 C5orf17Q8NAS9 161 aa14.28□□□□□ -0.12
RPUSD3-202ENST00000418713 C16orf74Q96GX8 76 aa14.28□□□□□ -0.12
RPUSD3-202ENST00000418713 PYGO2Q9BRQ0 406 aa14.28□□□□□ -0.12
RPUSD3-202ENST00000418713 IGKV2-40A0A087WW87 121 aaPredicted RBP14.27□□□□□ -0.13
RPUSD3-202ENST00000418713 C7orf71A4D174 169 aa14.27□□□□□ -0.13
RPUSD3-202ENST00000418713 EIF3GO75821 320 aaKnown RBP eCLIP14.27□□□□□ -0.13
RPUSD3-202ENST00000418713 IGKV2D-40P01614 121 aaPredicted RBP14.27□□□□□ -0.13
RPUSD3-202ENST00000418713 RAB5CP51148 216 aa14.27□□□□□ -0.13
RPUSD3-202ENST00000418713 EMP1P54849 157 aa14.27□□□□□ -0.13
RPUSD3-202ENST00000418713 NANOS2P60321 138 aaKnown RBP14.27□□□□□ -0.13
RPUSD3-202ENST00000418713 GFI1BQ5VTD9 330 aa14.27□□□□□ -0.13
RPUSD3-202ENST00000418713 PHLDA1Q8WV24 401 aaPredicted RBP14.27□□□□□ -0.13
RPUSD3-202ENST00000418713 FAM19A4Q96LR4 140 aa14.27□□□□□ -0.13
RPUSD3-202ENST00000418713 VGLL1Q99990 258 aa14.27□□□□□ -0.13
RPUSD3-202ENST00000418713 MAP1LC3B2A6NCE7 125 aa14.26□□□□□ -0.13
RPUSD3-202ENST00000418713 KLLNB2CW77 178 aa14.26□□□□□ -0.13
RPUSD3-202ENST00000418713 PRB4P10163 310 aaPredicted RBP14.26□□□□□ -0.13
RPUSD3-202ENST00000418713 SUMO1P63165 101 aaKnown RBP14.26□□□□□ -0.13
RPUSD3-202ENST00000418713 SLC51BQ86UW2 128 aa14.26□□□□□ -0.13
RPUSD3-202ENST00000418713 MAP1LC3BQ9GZQ8 125 aa14.26□□□□□ -0.13
RPUSD3-202ENST00000418713 TRAV12-3A0A0B4J271 114 aa14.25□□□□□ -0.13
RPUSD3-202ENST00000418713 ZNF705GA8MUZ8 300 aaPredicted RBP14.25□□□□□ -0.13
RPUSD3-202ENST00000418713 TEX46H3BTG2 121 aa14.25□□□□□ -0.13
RPUSD3-202ENST00000418713 J3KRW8 73 aa14.25□□□□□ -0.13
RPUSD3-202ENST00000418713 HTN1P15515 57 aa14.25□□□□□ -0.13
RPUSD3-202ENST00000418713 TCTAP57738 103 aa14.25□□□□□ -0.13
RPUSD3-202ENST00000418713 ZFP69Q49AA0 526 aa14.25□□□□□ -0.13
RPUSD3-202ENST00000418713 NDFIP1Q9BT67 221 aa14.25□□□□□ -0.13
RPUSD3-202ENST00000418713 RPH3ALQ9UNE2 315 aa14.25□□□□□ -0.13
RPUSD3-202ENST00000418713 TRAV10A0A0B4J240 114 aa14.24□□□□□ -0.13
RPUSD3-202ENST00000418713 LYRM9A8MSI8 78 aa14.24□□□□□ -0.13
RPUSD3-202ENST00000418713 RNASE4P34096 147 aaKnown RBP14.24□□□□□ -0.13
RPUSD3-202ENST00000418713 PPT1P50897 306 aa14.24□□□□□ -0.13
RPUSD3-202ENST00000418713 ZNF726P1Q15940 193 aa14.24□□□□□ -0.13
RPUSD3-202ENST00000418713 TMEM263Q8WUH6 116 aaKnown RBP14.24□□□□□ -0.13
RPUSD3-202ENST00000418713 DKK2Q9UBU2 259 aa14.24□□□□□ -0.13
RPUSD3-202ENST00000418713 YTHDF2Q9Y5A9 579 aaKnown RBP14.24□□□□□ -0.13
RPUSD3-202ENST00000418713 F6UZH7 168 aa14.23□□□□□ -0.13
RPUSD3-202ENST00000418713 GOLT1AQ6ZVE7 132 aa14.23□□□□□ -0.13
RPUSD3-202ENST00000418713 FAM213BQ8TBF2 198 aa14.23□□□□□ -0.13
RPUSD3-202ENST00000418713 C2CD4CQ8TF44 421 aa14.23□□□□□ -0.13
RPUSD3-202ENST00000418713 SFT2D1Q8WV19 159 aa14.23□□□□□ -0.13
RPUSD3-202ENST00000418713 MBD3L1Q8WWY6 194 aa14.23□□□□□ -0.13
RPUSD3-202ENST00000418713 LINC00467Q9BRT7 94 aa14.23□□□□□ -0.13
RPUSD3-202ENST00000418713 TCEAL7Q9BRU2 100 aa14.23□□□□□ -0.13
RPUSD3-202ENST00000418713 EPDR1Q9UM22 224 aa14.23□□□□□ -0.13
RPUSD3-202ENST00000418713 ARL2-SNX15V9GYD0 113 aa14.23□□□□□ -0.13
RPUSD3-202ENST00000418713 IFNA7P01567 189 aa14.22□□□□□ -0.13
RPUSD3-202ENST00000418713 TCRAP04437 139 aa14.22□□□□□ -0.13
RPUSD3-202ENST00000418713 H2AFB1P0C5Y9 115 aa14.22□□□□□ -0.13
RPUSD3-202ENST00000418713 FAM222AQ5U5X8 452 aa14.22□□□□□ -0.13
RPUSD3-202ENST00000418713 SSX7Q7RTT5 188 aa14.22□□□□□ -0.13
RPUSD3-202ENST00000418713 ZNF680Q8NEM1 530 aa14.22□□□□□ -0.13
RPUSD3-202ENST00000418713 HIST1H2BAQ96A08 127 aa14.22□□□□□ -0.13
RPUSD3-202ENST00000418713 TIMM8BQ9Y5J9 83 aaPredicted RBP14.22□□□□□ -0.13
RPUSD3-202ENST00000418713 DNAH7Q8WXX0 4024 aa14.21□□□□□ -0.13
RPUSD3-202ENST00000418713 SNURFLB1AK76 121 aa14.21□□□□□ -0.13
RPUSD3-202ENST00000418713 FHITP49789 147 aa14.21□□□□□ -0.13
RPUSD3-202ENST00000418713 FGF8P55075 233 aaPredicted RBP14.21□□□□□ -0.13
RPUSD3-202ENST00000418713 CYB561D1Q8N8Q1 229 aa14.21□□□□□ -0.13
RPUSD3-202ENST00000418713 ATG101Q9BSB4 218 aa14.21□□□□□ -0.13
RPUSD3-202ENST00000418713 RGS13O14921 159 aa14.2□□□□□ -0.14
RPUSD3-202ENST00000418713 ZNF324O75467 553 aaPredicted RBP14.2□□□□□ -0.14
RPUSD3-202ENST00000418713 DAD1P61803 113 aa14.2□□□□□ -0.14
RPUSD3-202ENST00000418713 KIR3DS1Q14943 382 aa14.2□□□□□ -0.14
RPUSD3-202ENST00000418713 C12orf74Q32Q52 190 aa14.2□□□□□ -0.14
RPUSD3-202ENST00000418713 SAPCD1Q5SSQ6 148 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms