RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 AMN1Q8IY45 258 aa10.58□□□□□ -0.72
BDNF-208ENST00000418212 C14orf178Q8N769 122 aaPredicted RBP10.58□□□□□ -0.72
BDNF-208ENST00000418212 LINC01356Q8N9X3 169 aa10.58□□□□□ -0.72
BDNF-208ENST00000418212 TRBV7-1A0A0A6YYK4 115 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 ZNF114Q8NC26 417 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 IFI27L1Q96BM0 104 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 SHANK2-AS3Q9BTD1 123 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 GTSF1LQ9H1H1 148 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 ST20Q9HBF5 79 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 LTBP2Q14767 1821 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 SH2D1AO60880 128 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 COX6CP09669 75 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 SLC25A16P16260 332 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 CKS1BP61024 79 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 COA6Q5JTJ3 125 aaKnown RBP10.57□□□□□ -0.72
BDNF-208ENST00000418212 MTURNQ8N3F0 131 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 TTC9CQ8N5M4 171 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 ZNF48Q96MX3 618 aaPredicted RBP10.57□□□□□ -0.72
BDNF-208ENST00000418212 CHD9Q3L8U1 2897 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 IGHV2-70DA0A0C4DH43 119 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 TOMM40O96008 361 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 C9orf139Q6ZV77 190 aa10.57□□□□□ -0.72
BDNF-208ENST00000418212 PEF1Q9UBV8 284 aaKnown RBP10.57□□□□□ -0.72
BDNF-208ENST00000418212 PSG3Q16557 428 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 NRGNQ92686 78 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 OBSL1O75147 1896 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 IGHV3-53P01767 116 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 ARMS2P0C7Q2 107 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 CIRBPQ14011 172 aaKnown RBP10.56□□□□□ -0.72
BDNF-208ENST00000418212 MPV17L2Q567V2 206 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 IL17RELQ6ZVW7 336 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 Q96MF0 132 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 PPBPP02775 128 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 OR13C6PQ8NH95 151 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 VCX2Q9H322 139 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 F2Z2F3 143 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 CR1LQ2VPA4 569 aa10.56□□□□□ -0.72
BDNF-208ENST00000418212 IGHV3-64A0A075B6Q5 118 aa10.55□□□□□ -0.72
BDNF-208ENST00000418212 C3orf79P0CE67 100 aa10.55□□□□□ -0.72
BDNF-208ENST00000418212 RPL35AP18077 110 aaKnown RBP10.55□□□□□ -0.72
BDNF-208ENST00000418212 YPEL4Q96NS1 127 aa10.55□□□□□ -0.72
BDNF-208ENST00000418212 NXT2Q9NPJ8 142 aaKnown RBP10.55□□□□□ -0.72
BDNF-208ENST00000418212 LSM4Q9Y4Z0 139 aaKnown RBP10.55□□□□□ -0.72
BDNF-208ENST00000418212 TMEM8BA6NDV4 472 aa10.55□□□□□ -0.72
BDNF-208ENST00000418212 IGLC2P0DOY2 106 aa10.55□□□□□ -0.72
BDNF-208ENST00000418212 IGLC3P0DOY3 106 aa10.55□□□□□ -0.72
BDNF-208ENST00000418212 DAZ1Q9NQZ3 744 aaKnown RBP10.55□□□□□ -0.72
BDNF-208ENST00000418212 KAAG1Q9UBP8 84 aa10.55□□□□□ -0.72
BDNF-208ENST00000418212 TRGV4A0A0C4DH28 118 aa10.55□□□□□ -0.72
BDNF-208ENST00000418212 GAGE12BA1L429 117 aa10.55□□□□□ -0.72
BDNF-208ENST00000418212 DEFB131AP59861 70 aa10.55□□□□□ -0.72
BDNF-208ENST00000418212 USMG5Q96IX5 58 aa10.55□□□□□ -0.72
BDNF-208ENST00000418212 NAA38Q9BRA0 125 aaKnown RBP10.55□□□□□ -0.72
BDNF-208ENST00000418212 RBX1P62877 108 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 PET117Q6UWS5 81 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 LINC00311Q8N616 119 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 SIGMAR1Q99720 223 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 CSTL1Q9H114 145 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 FNDC10F2Z333 226 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 CD300EQ496F6 205 aaPredicted RBP10.54□□□□□ -0.72
BDNF-208ENST00000418212 Q86TA4 180 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 CYSLTR1Q9Y271 337 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 TRAV9-2A0A087WT02 112 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 A0A087WWL8 130 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 SSBP2P81877 361 aaPredicted RBP10.54□□□□□ -0.72
BDNF-208ENST00000418212 SRSF1Q07955 248 aaKnown RBP eCLIP10.54□□□□□ -0.72
BDNF-208ENST00000418212 ZNF876PQ49A33 203 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 FAM120AOSQ5T036 256 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 TEX43Q6ZNM6 134 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 ATP5L2Q7Z4Y8 100 aa10.54□□□□□ -0.72
BDNF-208ENST00000418212 IGLC1P0CG04 106 aa10.53□□□□□ -0.72
BDNF-208ENST00000418212 IFI27P40305 119 aaPredicted RBP10.53□□□□□ -0.72
BDNF-208ENST00000418212 TMEM213A2RRL7 107 aa10.53□□□□□ -0.72
BDNF-208ENST00000418212 KNCNA6PVL3 124 aa10.53□□□□□ -0.72
BDNF-208ENST00000418212 TYMSP04818 313 aa10.53□□□□□ -0.72
BDNF-208ENST00000418212 SLAQ13239 276 aa10.53□□□□□ -0.72
BDNF-208ENST00000418212 TMEM101Q96IK0 257 aa10.52□□□□□ -0.72
BDNF-208ENST00000418212 MRPL16Q9NX20 251 aaKnown RBP10.52□□□□□ -0.73
BDNF-208ENST00000418212 TRGV1A0A0A0MS02 117 aa10.52□□□□□ -0.73
BDNF-208ENST00000418212 FAM110DQ8TAY7 271 aaPredicted RBP10.52□□□□□ -0.73
BDNF-208ENST00000418212 NHP2Q9NX24 153 aaKnown RBP10.52□□□□□ -0.73
BDNF-208ENST00000418212 IGHV4-61A0A0C4DH41 118 aa10.52□□□□□ -0.73
BDNF-208ENST00000418212 LHBP01229 141 aa10.52□□□□□ -0.73
BDNF-208ENST00000418212 SPINK13Q1W4C9 94 aa10.52□□□□□ -0.73
BDNF-208ENST00000418212 LYPD1Q8N2G4 141 aa10.52□□□□□ -0.73
BDNF-208ENST00000418212 TRBV19A0A075B6N1 114 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 C22orf34Q6ZV56 151 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 C17orf77Q96MU5 243 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 hDV102S1A0JD36 115 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 H3BUT2 72 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 Q8NA96 180 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 DPH3Q96FX2 82 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 C8orf49Q96NF6 230 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 RCHY1Q96PM5 261 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 YPEL3P61236 119 aaPredicted RBP10.51□□□□□ -0.73
BDNF-208ENST00000418212 LINC00477Q96M19 166 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 CHCHD5Q9BSY4 110 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 LY96Q9Y6Y9 160 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 VPS13AQ96RL7 3174 aa10.51□□□□□ -0.73
BDNF-208ENST00000418212 IGLC7A0M8Q6 106 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms