RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 FER1L6-AS1Q8NA97 138 aa10.03□□□□□ -0.8
LRRTM1-205ENST00000417012 VPS13CQ709C8 3753 aa10.02□□□□□ -0.8
LRRTM1-205ENST00000417012 NPYP01303 97 aa10.02□□□□□ -0.8
LRRTM1-205ENST00000417012 ADORA2A-AS1P86434 159 aa10.02□□□□□ -0.8
LRRTM1-205ENST00000417012 ZNF672Q499Z4 452 aaPredicted RBP10.02□□□□□ -0.8
LRRTM1-205ENST00000417012 KLF17Q5JT82 389 aaPredicted RBP10.02□□□□□ -0.8
LRRTM1-205ENST00000417012 JMJD8Q96S16 334 aa10.02□□□□□ -0.8
LRRTM1-205ENST00000417012 ONECUT1Q9UBC0 465 aa10.02□□□□□ -0.8
LRRTM1-205ENST00000417012 AKAP6Q13023 2319 aa10.02□□□□□ -0.81
LRRTM1-205ENST00000417012 A0A0G2JLM5 398 aa10.02□□□□□ -0.81
LRRTM1-205ENST00000417012 SMKR1H3BMG3 65 aa10.02□□□□□ -0.81
LRRTM1-205ENST00000417012 LY6LH3BQJ8 138 aa10.02□□□□□ -0.81
LRRTM1-205ENST00000417012 K7EP34 96 aa10.02□□□□□ -0.81
LRRTM1-205ENST00000417012 MFAP4P55083 255 aa10.02□□□□□ -0.81
LRRTM1-205ENST00000417012 WNK2Q9Y3S1 2297 aa10.02□□□□□ -0.81
LRRTM1-205ENST00000417012 BCL6BQ8N143 479 aaPredicted RBP10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 PRR25Q96S07 402 aa10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 A0A1W2PRD5 423 aa10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 A0A1W2PRF3 423 aa10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 A0A1W2PRM7 423 aa10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 RPL7P18124 248 aaKnown RBP10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 PAX8Q06710 450 aa10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 ADAMTSL5Q6ZMM2 481 aa10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 HIVEP3Q5T1R4 2406 aa10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 FBLL1A6NHQ2 334 aaKnown RBP10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 NDUFS7O75251 213 aa10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 SAP30O75446 220 aa10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 EGR2P11161 476 aaPredicted RBP10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 SCGB2A2Q13296 93 aa10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 OR2K2Q8NGT1 345 aa10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 NAA38Q9BRA0 125 aaKnown RBP10.01□□□□□ -0.81
LRRTM1-205ENST00000417012 COX8CQ7Z4L0 72 aa10□□□□□ -0.81
LRRTM1-205ENST00000417012 PCP2Q8IVA1 136 aa10□□□□□ -0.81
LRRTM1-205ENST00000417012 RAB37Q96AX2 223 aa10□□□□□ -0.81
LRRTM1-205ENST00000417012 MAP1LC3AQ9H492 121 aa10□□□□□ -0.81
LRRTM1-205ENST00000417012 ITPR1Q14643 2758 aa10□□□□□ -0.81
LRRTM1-205ENST00000417012 KLRB1Q12918 225 aa10□□□□□ -0.81
LRRTM1-205ENST00000417012 WFDC3Q8IUB2 231 aa10□□□□□ -0.81
LRRTM1-205ENST00000417012 Q8TAT8 98 aa10□□□□□ -0.81
LRRTM1-205ENST00000417012 SAMD13Q5VXD3 122 aa9.99□□□□□ -0.81
LRRTM1-205ENST00000417012 NPIPB5A8MRT5 1133 aa9.99□□□□□ -0.81
LRRTM1-205ENST00000417012 HES1Q14469 280 aa9.99□□□□□ -0.81
LRRTM1-205ENST00000417012 ZNF48Q96MX3 618 aaPredicted RBP9.99□□□□□ -0.81
LRRTM1-205ENST00000417012 C18orf15Q96N68 181 aa9.99□□□□□ -0.81
LRRTM1-205ENST00000417012 C21orf62Q9NYP8 219 aa9.99□□□□□ -0.81
LRRTM1-205ENST00000417012 DPM3Q9P2X0 92 aa9.99□□□□□ -0.81
LRRTM1-205ENST00000417012 DKK2Q9UBU2 259 aa9.99□□□□□ -0.81
LRRTM1-205ENST00000417012 IGLV11-55A0A075B6I3 123 aa9.99□□□□□ -0.81
LRRTM1-205ENST00000417012 IGLC6P0CF74 106 aa9.99□□□□□ -0.81
LRRTM1-205ENST00000417012 FBXL19-AS1Q494R0 122 aa9.99□□□□□ -0.81
LRRTM1-205ENST00000417012 SCGB2A1O75556 95 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 NDUFA3O95167 84 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 CEACAM3P40198 252 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 PRSS57Q6UWY2 283 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 OR5A1Q8NGJ0 315 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 FANCD2OSQ96PS1 177 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 NPFFR1Q9GZQ6 430 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 A0A1W2PPM0 123 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 A6NJY4 79 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 ORM1P02763 201 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 ZNF80P51504 273 aaPredicted RBP9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 PSMG4Q5JS54 123 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 NPBQ8NG41 125 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 SPCS1Q9Y6A9 102 aa9.98□□□□□ -0.81
LRRTM1-205ENST00000417012 C5orf64Q2M2E5 130 aa9.97□□□□□ -0.81
LRRTM1-205ENST00000417012 CFHR4Q92496 578 aa9.97□□□□□ -0.81
LRRTM1-205ENST00000417012 VGLL1Q99990 258 aa9.97□□□□□ -0.81
LRRTM1-205ENST00000417012 LY6DQ14210 128 aa9.97□□□□□ -0.81
LRRTM1-205ENST00000417012 ARPC1AQ92747 370 aa9.97□□□□□ -0.81
LRRTM1-205ENST00000417012 F8W735 103 aaPredicted RBP9.96□□□□□ -0.81
LRRTM1-205ENST00000417012 FABP2P12104 132 aa9.96□□□□□ -0.81
LRRTM1-205ENST00000417012 LEPP41159 167 aa9.96□□□□□ -0.81
LRRTM1-205ENST00000417012 UCNP55089 124 aa9.96□□□□□ -0.81
LRRTM1-205ENST00000417012 KLRD1Q13241 179 aa9.96□□□□□ -0.81
LRRTM1-205ENST00000417012 TM4SF20Q53R12 229 aa9.96□□□□□ -0.81
LRRTM1-205ENST00000417012 NXT2Q9NPJ8 142 aaKnown RBP9.96□□□□□ -0.81
LRRTM1-205ENST00000417012 CELSR1Q9NYQ6 3014 aa9.96□□□□□ -0.81
LRRTM1-205ENST00000417012 IGHV3-23P01764 117 aa9.96□□□□□ -0.82
LRRTM1-205ENST00000417012 PIFOQ8TCI5 191 aa9.96□□□□□ -0.82
LRRTM1-205ENST00000417012 GCSHP23434 173 aa9.96□□□□□ -0.82
LRRTM1-205ENST00000417012 SRSF2Q01130 221 aaKnown RBP9.96□□□□□ -0.82
LRRTM1-205ENST00000417012 RNF185Q96GF1 192 aa9.96□□□□□ -0.82
LRRTM1-205ENST00000417012 MSRB1Q9NZV6 116 aa9.96□□□□□ -0.82
LRRTM1-205ENST00000417012 G3V4G9 280 aa9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 PRSS1P07477 247 aa9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 SMIM13P0DJ93 91 aa9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 FCER1GP30273 86 aa9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 TMEM95Q3KNT9 176 aa9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 IGFL4Q6B9Z1 124 aa9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 OR11H6Q8NGC7 330 aa9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 FABP5P3A8MUU1 101 aa9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 HLA-DMBP28068 263 aa9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 ODF1Q14990 250 aa9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 ZNF562Q6V9R5 426 aa9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 CNFNQ9BYD5 112 aa9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 SPTAN1Q13813 2472 aaKnown RBP9.95□□□□□ -0.82
LRRTM1-205ENST00000417012 A0A1B0GV72 72 aa9.94□□□□□ -0.82
LRRTM1-205ENST00000417012 TNFRSF6BO95407 300 aa9.94□□□□□ -0.82
LRRTM1-205ENST00000417012 SMAGPQ0VAQ4 97 aa9.94□□□□□ -0.82
LRRTM1-205ENST00000417012 NEGR1Q7Z3B1 354 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms