RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 GNPNAT1Q96EK6 184 aaPredicted RBP12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 ZNF503Q96F45 646 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 FAM167A-AS1Q96KT0 104 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 FAM19A4Q96LR4 140 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 WDR61Q9GZS3 305 aaKnown RBP12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 AGPAT4-IT1Q9H0P7 198 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 OR51M1Q9H341 326 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 LINC00588Q9Y4M8 146 aa12.28□□□□□ -0.44
PDLIM2-208ENST00000416159 NBDYA0A0U1RRE5 68 aa12.27□□□□□ -0.45
PDLIM2-208ENST00000416159 A6NHS1 94 aa12.27□□□□□ -0.45
PDLIM2-208ENST00000416159 C17orf112F2Z3M2 114 aa12.27□□□□□ -0.45
PDLIM2-208ENST00000416159 MED14OSP0DP75 135 aa12.27□□□□□ -0.45
PDLIM2-208ENST00000416159 M6PRP20645 277 aa12.27□□□□□ -0.45
PDLIM2-208ENST00000416159 ICAM4Q14773 271 aa12.27□□□□□ -0.45
PDLIM2-208ENST00000416159 C9orf47Q6ZRZ4 202 aa12.27□□□□□ -0.45
PDLIM2-208ENST00000416159 RXFP4Q8TDU9 374 aa12.27□□□□□ -0.45
PDLIM2-208ENST00000416159 LINC00467Q9BRT7 94 aa12.27□□□□□ -0.45
PDLIM2-208ENST00000416159 MRPL32Q9BYC8 188 aaKnown RBP12.27□□□□□ -0.45
PDLIM2-208ENST00000416159 DNAH2Q9P225 4427 aa12.27□□□□□ -0.45
PDLIM2-208ENST00000416159 TRAV26-1A0A087WT03 109 aa12.26□□□□□ -0.45
PDLIM2-208ENST00000416159 ZNF324O75467 553 aaPredicted RBP12.26□□□□□ -0.45
PDLIM2-208ENST00000416159 NMBP08949 121 aa12.26□□□□□ -0.45
PDLIM2-208ENST00000416159 CRISP2P16562 243 aa12.26□□□□□ -0.45
PDLIM2-208ENST00000416159 ZNF680Q8NEM1 530 aa12.26□□□□□ -0.45
PDLIM2-208ENST00000416159 MARVELD1Q9BSK0 173 aa12.26□□□□□ -0.45
PDLIM2-208ENST00000416159 PTTG2Q9NZH5 202 aa12.26□□□□□ -0.45
PDLIM2-208ENST00000416159 H3BNG1 76 aa12.25□□□□□ -0.45
PDLIM2-208ENST00000416159 GPX1P07203 203 aa12.25□□□□□ -0.45
PDLIM2-208ENST00000416159 RNASE4P34096 147 aaKnown RBP12.25□□□□□ -0.45
PDLIM2-208ENST00000416159 CD300CQ08708 224 aa12.25□□□□□ -0.45
PDLIM2-208ENST00000416159 ANXA2RQ3ZCQ2 193 aa12.25□□□□□ -0.45
PDLIM2-208ENST00000416159 TMEM78Q5T7P6 136 aa12.25□□□□□ -0.45
PDLIM2-208ENST00000416159 SSX7Q7RTT5 188 aa12.25□□□□□ -0.45
PDLIM2-208ENST00000416159 EIF4E3Q8N5X7 224 aaKnown RBP12.25□□□□□ -0.45
PDLIM2-208ENST00000416159 PPP1R1CQ8WVI7 109 aa12.25□□□□□ -0.45
PDLIM2-208ENST00000416159 PAXXQ9BUH6 204 aa12.25□□□□□ -0.45
PDLIM2-208ENST00000416159 KRTAP17-1Q9BYP8 105 aa12.25□□□□□ -0.45
PDLIM2-208ENST00000416159 FUT9Q9Y231 359 aa12.25□□□□□ -0.45
PDLIM2-208ENST00000416159 KIAA1109Q2LD37 5005 aa12.24□□□□□ -0.45
PDLIM2-208ENST00000416159 A0A0J9YY99 117 aa12.24□□□□□ -0.45
PDLIM2-208ENST00000416159 HOXA5P20719 270 aa12.24□□□□□ -0.45
PDLIM2-208ENST00000416159 BTN1A1Q13410 526 aa12.24□□□□□ -0.45
PDLIM2-208ENST00000416159 FAM122CQ6P4D5 195 aa12.24□□□□□ -0.45
PDLIM2-208ENST00000416159 Q6ZTI0 123 aa12.24□□□□□ -0.45
PDLIM2-208ENST00000416159 C6orf223Q8N319 242 aa12.24□□□□□ -0.45
PDLIM2-208ENST00000416159 GSN-AS1Q9NRJ2 163 aa12.24□□□□□ -0.45
PDLIM2-208ENST00000416159 ZNF492Q9P255 531 aa12.24□□□□□ -0.45
PDLIM2-208ENST00000416159 OR10J4P0C629 311 aa12.23□□□□□ -0.45
PDLIM2-208ENST00000416159 H2BFSP57053 126 aa12.23□□□□□ -0.45
PDLIM2-208ENST00000416159 DEFA1P59665 94 aa12.23□□□□□ -0.45
PDLIM2-208ENST00000416159 DEFA3P59666 94 aa12.23□□□□□ -0.45
PDLIM2-208ENST00000416159 C11orf72Q8NBR9 251 aa12.23□□□□□ -0.45
PDLIM2-208ENST00000416159 FXYD5Q96DB9 178 aa12.23□□□□□ -0.45
PDLIM2-208ENST00000416159 C18orf15Q96N68 181 aa12.23□□□□□ -0.45
PDLIM2-208ENST00000416159 ATP5SQ99766 215 aa12.23□□□□□ -0.45
PDLIM2-208ENST00000416159 VGLL1Q99990 258 aa12.23□□□□□ -0.45
PDLIM2-208ENST00000416159 Q9H8V8 135 aa12.23□□□□□ -0.45
PDLIM2-208ENST00000416159 TRGV2A0A075B6R0 118 aa12.22□□□□□ -0.45
PDLIM2-208ENST00000416159 IGKV2-40A0A087WW87 121 aaPredicted RBP12.22□□□□□ -0.45
PDLIM2-208ENST00000416159 SSNA1O43805 119 aa12.22□□□□□ -0.45
PDLIM2-208ENST00000416159 OR7C2O60412 319 aa12.22□□□□□ -0.45
PDLIM2-208ENST00000416159 MPC2O95563 127 aa12.22□□□□□ -0.45
PDLIM2-208ENST00000416159 IGKV2D-40P01614 121 aaPredicted RBP12.22□□□□□ -0.45
PDLIM2-208ENST00000416159 PET100P0DJ07 73 aa12.22□□□□□ -0.45
PDLIM2-208ENST00000416159 ZFAND2AQ8N6M9 145 aa12.22□□□□□ -0.45
PDLIM2-208ENST00000416159 TMPRSS5Q9H3S3 457 aa12.22□□□□□ -0.45
PDLIM2-208ENST00000416159 HSPB11Q9Y547 144 aa12.22□□□□□ -0.45
PDLIM2-208ENST00000416159 TRGV1A0A0A0MS02 117 aa12.21□□□□□ -0.45
PDLIM2-208ENST00000416159 TRBV7-9A0A0J9YWB2 115 aa12.21□□□□□ -0.45
PDLIM2-208ENST00000416159 RGS13O14921 159 aa12.21□□□□□ -0.45
PDLIM2-208ENST00000416159 IFNA5P01569 189 aa12.21□□□□□ -0.45
PDLIM2-208ENST00000416159 CSN1S1P47710 185 aa12.21□□□□□ -0.45
PDLIM2-208ENST00000416159 ZNF138P52744 262 aa12.21□□□□□ -0.45
PDLIM2-208ENST00000416159 TCL1AP56279 114 aa12.21□□□□□ -0.45
PDLIM2-208ENST00000416159 IBA57Q5T440 356 aaKnown RBP12.21□□□□□ -0.45
PDLIM2-208ENST00000416159 LYPD1Q8N2G4 141 aa12.21□□□□□ -0.45
PDLIM2-208ENST00000416159 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.45
PDLIM2-208ENST00000416159 MUC4Q99102 2169 aa12.2□□□□□ -0.46
PDLIM2-208ENST00000416159 SPINK4O60575 86 aa12.2□□□□□ -0.46
PDLIM2-208ENST00000416159 RPL12P30050 165 aaKnown RBP12.2□□□□□ -0.46
PDLIM2-208ENST00000416159 TNP2Q05952 138 aa12.2□□□□□ -0.46
PDLIM2-208ENST00000416159 ESRGQ1W209 222 aa12.2□□□□□ -0.46
PDLIM2-208ENST00000416159 FFAR4Q5NUL3 377 aa12.2□□□□□ -0.46
PDLIM2-208ENST00000416159 PHYHIPLQ96FC7 376 aa12.2□□□□□ -0.46
PDLIM2-208ENST00000416159 UPK3BQ9BT76 320 aa12.2□□□□□ -0.46
PDLIM2-208ENST00000416159 KLF12Q9Y4X4 402 aa12.2□□□□□ -0.46
PDLIM2-208ENST00000416159 PKHD1P08F94 4074 aa12.19□□□□□ -0.46
PDLIM2-208ENST00000416159 IGHV1OR15-1A0A075B7D0 117 aa12.19□□□□□ -0.46
PDLIM2-208ENST00000416159 RBAKDNA6NC62 111 aa12.19□□□□□ -0.46
PDLIM2-208ENST00000416159 TAS2R45P59539 299 aa12.19□□□□□ -0.46
PDLIM2-208ENST00000416159 RANP62826 216 aaKnown RBP12.19□□□□□ -0.46
PDLIM2-208ENST00000416159 TTC32Q5I0X7 151 aa12.19□□□□□ -0.46
PDLIM2-208ENST00000416159 DNAH11Q96DT5 4516 aa12.19□□□□□ -0.46
PDLIM2-208ENST00000416159 DYNC1H1Q14204 4646 aaKnown RBP12.18□□□□□ -0.46
PDLIM2-208ENST00000416159 UBE2L3P68036 154 aaKnown RBP12.18□□□□□ -0.46
PDLIM2-208ENST00000416159 KHDC3LQ587J8 217 aa12.18□□□□□ -0.46
PDLIM2-208ENST00000416159 PRR9Q5T870 116 aa12.18□□□□□ -0.46
PDLIM2-208ENST00000416159 ZNF575Q86XF7 245 aa12.18□□□□□ -0.46
PDLIM2-208ENST00000416159 VSIG2Q96IQ7 327 aa12.18□□□□□ -0.46
PDLIM2-208ENST00000416159 ARPC5LQ9BPX5 153 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms