RNA–Protein interactions for RNA: ENST00000416123.6

COL12A1-203, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 8,964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-203ENST00000416123 WNK1Q9H4A3 2382 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 Q86TA4 180 aa8.5□□□□□ -1.05
COL12A1-203ENST00000416123 RSPO3Q9BXY4 272 aaPredicted RBP8.5□□□□□ -1.05
COL12A1-203ENST00000416123 INS-IGF2F8WCM5 200 aa8.49□□□□□ -1.05
COL12A1-203ENST00000416123 CYYR1Q96J86 154 aa8.49□□□□□ -1.05
COL12A1-203ENST00000416123 IGHV4-59P01825 116 aa8.49□□□□□ -1.05
COL12A1-203ENST00000416123 PAX9P55771 341 aa8.49□□□□□ -1.05
COL12A1-203ENST00000416123 SS18Q15532 418 aa8.49□□□□□ -1.05
COL12A1-203ENST00000416123 CLPSL2Q6UWE3 100 aa8.49□□□□□ -1.05
COL12A1-203ENST00000416123 LYPD1Q8N2G4 141 aa8.49□□□□□ -1.05
COL12A1-203ENST00000416123 LIME1Q9H400 295 aa8.49□□□□□ -1.05
COL12A1-203ENST00000416123 RSPO1Q2MKA7 263 aaPredicted RBP8.49□□□□□ -1.05
COL12A1-203ENST00000416123 A0A087X0K7 114 aa8.49□□□□□ -1.05
COL12A1-203ENST00000416123 TRAV1-1A0A0B4J248 108 aa8.48□□□□□ -1.05
COL12A1-203ENST00000416123 ZNF625Q96I27 306 aaPredicted RBP8.48□□□□□ -1.05
COL12A1-203ENST00000416123 GGTLC3B5MD39 225 aa8.48□□□□□ -1.05
COL12A1-203ENST00000416123 DEFB112Q30KQ8 113 aa8.48□□□□□ -1.05
COL12A1-203ENST00000416123 ZFHX2Q9C0A1 2572 aaPredicted RBP8.48□□□□□ -1.05
COL12A1-203ENST00000416123 C5orf30Q96GV9 206 aa8.48□□□□□ -1.05
COL12A1-203ENST00000416123 GUSBP1Q15486 140 aa8.48□□□□□ -1.05
COL12A1-203ENST00000416123 MEGF9Q9H1U4 602 aa8.48□□□□□ -1.05
COL12A1-203ENST00000416123 ERG28Q9UKR5 140 aa8.48□□□□□ -1.05
COL12A1-203ENST00000416123 AMBPP02760 352 aa8.48□□□□□ -1.05
COL12A1-203ENST00000416123 TMEM75Q8N9X5 138 aa8.48□□□□□ -1.05
COL12A1-203ENST00000416123 C15orf65H3BRN8 121 aa8.48□□□□□ -1.05
COL12A1-203ENST00000416123 IGHV2-5P01817 119 aa8.47□□□□□ -1.05
COL12A1-203ENST00000416123 VWC2LB2RUY7 222 aa8.47□□□□□ -1.05
COL12A1-203ENST00000416123 MST1LQ2TV78 715 aa8.47□□□□□ -1.05
COL12A1-203ENST00000416123 FAM90A2PQ658T7 463 aa8.47□□□□□ -1.05
COL12A1-203ENST00000416123 HIST3H2BBQ8N257 126 aa8.47□□□□□ -1.05
COL12A1-203ENST00000416123 ORAOV1Q8WV07 137 aa8.47□□□□□ -1.05
COL12A1-203ENST00000416123 TMEM242Q9NWH2 141 aa8.47□□□□□ -1.05
COL12A1-203ENST00000416123 SAMD5Q5TGI4 173 aa8.47□□□□□ -1.05
COL12A1-203ENST00000416123 LAMTOR3Q9UHA4 124 aa8.47□□□□□ -1.05
COL12A1-203ENST00000416123 PRR14LQ5THK1 2151 aa8.47□□□□□ -1.05
COL12A1-203ENST00000416123 UBE2CO00762 179 aa8.46□□□□□ -1.05
COL12A1-203ENST00000416123 COLCA2A8K830 154 aa8.46□□□□□ -1.05
COL12A1-203ENST00000416123 RASL10AQ92737 203 aa8.46□□□□□ -1.05
COL12A1-203ENST00000416123 TMEM238C9JI98 176 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 J3QLI3 93 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 HAPLN4Q86UW8 402 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 IGHV4-30-2A0A087WSY4 118 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 C22orf46C9J442 243 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 FNDC10F2Z333 226 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 CGB3P0DN86 165 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 APOC4P55056 127 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 WT1-ASQ06250 92 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 NEGR1Q7Z3B1 354 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 IGF2BP2-AS1Q96M15 143 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 TNFRSF6BO95407 300 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 IGHV4-38-2P0DP08 117 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 GAGE6Q13070 117 aa8.46□□□□□ -1.06
COL12A1-203ENST00000416123 PLXNB1O43157 2135 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 LYL1P12980 280 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 RASL11AQ6T310 242 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 LINC00587B1AMM8 73 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 PDE6HQ13956 83 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 A0A1B0GUS0 222 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 DEFB113Q30KQ7 82 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 TRPT1Q86TN4 253 aaKnown RBP8.45□□□□□ -1.06
COL12A1-203ENST00000416123 TIMM21Q9BVV7 248 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 A0A1B0GW64 132 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 ITGB1BP1O14713 200 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 TRAV8-4A0A0B4J246 113 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 ANXA2RQ3ZCQ2 193 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 PRIMA1Q86XR5 153 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 LURAP1LQ8IV03 231 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 IGKV1-39P01597 117 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 IGKV1D-39P04432 117 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 HLA-DMBP28068 263 aa8.45□□□□□ -1.06
COL12A1-203ENST00000416123 CCL24O00175 119 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 BCL6BQ8N143 479 aaPredicted RBP8.44□□□□□ -1.06
COL12A1-203ENST00000416123 EDA2RQ9HAV5 297 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 TP53TG1Q9Y2A0 90 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 ETV2O00321 342 aaPredicted RBP8.44□□□□□ -1.06
COL12A1-203ENST00000416123 RNASE13Q5GAN3 156 aaKnown RBP8.44□□□□□ -1.06
COL12A1-203ENST00000416123 TRBV24-1A0A075B6N3 115 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 LEPROTO15243 131 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 C17orf77Q96MU5 243 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 CTSZQ9UBR2 303 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 NDUFA4O00483 81 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 ZNRF2Q8NHG8 242 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 RITA1Q96K30 269 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 CDKN1BP46527 198 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 ZNF561-AS1K7EIQ3 104 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 PFN1P07737 140 aaKnown RBP8.44□□□□□ -1.06
COL12A1-203ENST00000416123 YPEL3P61236 119 aaPredicted RBP8.44□□□□□ -1.06
COL12A1-203ENST00000416123 PLEKHB2Q96CS7 222 aa8.44□□□□□ -1.06
COL12A1-203ENST00000416123 TRBV19A0A075B6N1 114 aa8.43□□□□□ -1.06
COL12A1-203ENST00000416123 TRBV25-1A0A075B6N4 114 aa8.43□□□□□ -1.06
COL12A1-203ENST00000416123 IGLV2-23P01705 113 aa8.43□□□□□ -1.06
COL12A1-203ENST00000416123 STPG4Q8N801 248 aa8.43□□□□□ -1.06
COL12A1-203ENST00000416123 ZNF479Q96JC4 524 aa8.43□□□□□ -1.06
COL12A1-203ENST00000416123 DSCAML1Q8TD84 2053 aa8.43□□□□□ -1.06
COL12A1-203ENST00000416123 ESDP10768 282 aa8.43□□□□□ -1.06
COL12A1-203ENST00000416123 PFN2P35080 140 aa8.43□□□□□ -1.06
COL12A1-203ENST00000416123 SYS1-DBNDD2H3BUS1 97 aa8.43□□□□□ -1.06
COL12A1-203ENST00000416123 SLURP1P55000 103 aa8.43□□□□□ -1.06
COL12A1-203ENST00000416123 SLX1AQ9BQ83 275 aa8.43□□□□□ -1.06
COL12A1-203ENST00000416123 ZMAT4Q9H898 229 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms