RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 MAPK1IP1LQ8NDC0 245 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 OR4K15Q8NH41 348 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 GRPEL2Q8TAA5 225 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 SIGMAR1Q99720 223 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 RTL8AQ9BWD3 113 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 OR2J1Q9GZK6 312 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 IFI27L2Q9H2X8 130 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 SS18L2Q9UHA2 77 aa1.72□□□□□ -2.13
MCF2-204ENST00000414978 A0A0B4J2C4 111 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 F5H5P2 479 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 OR7C1O76099 320 aaPredicted RBP1.71□□□□□ -2.14
MCF2-204ENST00000414978 IGKV3-15P01624 115 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 PMP2P02689 132 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 IL5P05113 134 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 CECR9P0C854 216 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 CRISP2P16562 243 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 RBM11P57052 281 aaKnown RBP1.71□□□□□ -2.14
MCF2-204ENST00000414978 LINC00313P59037 77 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 TMEM267Q0VDI3 215 aaPredicted RBP1.71□□□□□ -2.14
MCF2-204ENST00000414978 FCN2Q15485 313 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 OR8G1Q15617 311 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 NDUFA5Q16718 116 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 PIGYQ3MUY2 71 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 AVPI1Q5T686 147 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 HAGHLQ6PII5 290 aaPredicted RBP1.71□□□□□ -2.14
MCF2-204ENST00000414978 C6orf201Q7Z4U5 140 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 PCP2Q8IVA1 136 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 C1orf174Q8IYL3 243 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 TCTE3Q8IZS6 198 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 SLC35G3Q8N808 338 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 OR1L8Q8NGR8 309 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 OR13D1Q8NGV5 346 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 SLC25A40Q8TBP6 338 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 OR5P3Q8WZ94 311 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 ADAT1Q9BUB4 502 aaKnown RBP1.71□□□□□ -2.14
MCF2-204ENST00000414978 ZNF430Q9H8G1 570 aaPredicted RBP1.71□□□□□ -2.14
MCF2-204ENST00000414978 UFC1Q9Y3C8 167 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 IGKV1-12A0A0C4DH73 117 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 SNRPGP15A8MWD9 76 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 IQCF6A8MYZ5 107 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 GEMIN2O14893 280 aaKnown RBP1.71□□□□□ -2.14
MCF2-204ENST00000414978 IGKV1D-12P01611 117 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 TRGV3P03979 118 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 FGF12P61328 243 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 BAP18Q8IXM2 172 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 KLF14Q8TD94 323 aaPredicted RBP1.71□□□□□ -2.14
MCF2-204ENST00000414978 PHYHIPLQ96FC7 376 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 KRTAP4-7Q9BYR0 210 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 COA4Q9NYJ1 87 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 AK3Q9UIJ7 227 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 ARFGEF3Q5TH69 2177 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 IGHV1-18A0A0C4DH31 117 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 IGHV3-66A0A0C4DH42 116 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 FAM236DA0A1B0GTK5 79 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 MCRIP1C9JLW8 97 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 MSMBP08118 114 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 SULT1A3P0DMM9 295 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 SULT1A4P0DMN0 295 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 FAM236CP0DP71 79 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 ERP29P30040 261 aaKnown RBP1.71□□□□□ -2.14
MCF2-204ENST00000414978 SRIP30626 198 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 MPV17P39210 176 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 PSMB3P49720 205 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 KCNJ8Q15842 424 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 MPV17LQ2QL34 196 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 SLC16A13Q7RTY0 426 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 Q8IYB0 196 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 TERB2Q8NHR7 220 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 ZNF431Q8TF32 576 aaPredicted RBP1.71□□□□□ -2.14
MCF2-204ENST00000414978 MAFIPQ8WZ33 124 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 HYLS1Q96M11 299 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 CHST6Q9GZX3 395 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 ZNF286AQ9HBT8 521 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 ANAPC10Q9UM13 185 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 PXMP4Q9Y6I8 212 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 U3KQK5 164 aa1.71□□□□□ -2.14
MCF2-204ENST00000414978 PLECQ15149 4684 aaKnown RBP1.7□□□□□ -2.14
MCF2-204ENST00000414978 MEIKINA0A087WXM9 373 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 A0A1B0GV90 55 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 A0A1W2PRE2 83 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 DPRXA6NFQ7 191 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 OR4C46A6NHA9 309 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 E7EQL1 145 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 SDCBPO00560 298 aaPredicted RBP1.7□□□□□ -2.14
MCF2-204ENST00000414978 DEGS1O15121 323 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 NPY1RP25929 384 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 CD34P28906 385 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 GRK1Q15835 563 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 SMIM20Q8N5G0 67 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 OR13C8Q8NGS7 320 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 MUC7Q8TAX7 377 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 Q8WTZ3 238 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 OR51I2Q9H344 312 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 PAIP2BQ9ULR5 123 aaKnown RBP1.7□□□□□ -2.14
MCF2-204ENST00000414978 HEATR1Q9H583 2144 aaKnown RBP1.7□□□□□ -2.14
MCF2-204ENST00000414978 IGHV3-64DA0A0J9YX35 117 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 YIF1AO95070 293 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 FGF6P10767 208 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 SCGB1A1P11684 91 aa1.7□□□□□ -2.14
MCF2-204ENST00000414978 OMGP23515 440 aa1.7□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms