RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 C10orf55Q5SWW7 151 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 TMEM136Q6ZRR5 245 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 LINC00311Q8N616 119 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 TCTEX1D1Q8N7M0 179 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 INO80EQ8NBZ0 244 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 ZNF436-AS1Q8NC38 126 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 CLDND2Q8NHS1 167 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 GALMQ96C23 342 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 MUCL1Q96DR8 90 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 TVP23CQ96ET8 276 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 FAM19A4Q96LR4 140 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 GPR82Q96P67 336 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 MGST2Q99735 147 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 NABP2Q9BQ15 211 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 PSMG3Q9BT73 122 aaPredicted RBP1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 MRPL20Q9BYC9 149 aaKnown RBP1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 WDR61Q9GZS3 305 aaKnown RBP1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 RPRMQ9NS64 109 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 TMEM14BQ9NUH8 114 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 MRPL36Q9P0J6 103 aaKnown RBP1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 DCHS2Q6V1P9 2916 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 USP24Q9UPU5 2620 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 SPTBN2O15020 2390 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 KALRNO60229 2985 aa1.77□□□□□ -2.13
HMGB1P11-201ENST00000413899 IGKV1D-37A0A075B6S9 117 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 IGHV2-26A0A0B4J1V2 119 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 IGHV1-69-2A0A0G2JMI3 117 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 SERTM2A0A1B0GWG4 89 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 ODF3BA8MYP8 253 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 SEC14L6B5MCN3 397 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 RNASEK-C17orf49H0YIS7 233 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 UPK2O00526 184 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 PSPHP1O15172 72 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 KRASP01116 189 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 SFTA3P0C7M3 94 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 M6PRP20645 277 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 NPPCP23582 126 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 NFYBP25208 207 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 PAX6P26367 422 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 CNTFRP26992 372 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 GALR1P47211 349 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 UBE2KP61086 200 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 RAB14P61106 215 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 MEF2BQ02080 365 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 PRB3Q04118 309 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 WT1-ASQ06250 92 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 CATR1Q13166 79 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 BTN1A1Q13410 526 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 GUK1Q16774 197 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 LRRC75BQ2VPJ9 315 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 HEPN1Q6WQI6 88 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 SSX8Q7RTT4 187 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 KRTAP13-1Q8IUC0 172 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 DYNAPQ8N1N2 210 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 RPP25LQ8N5L8 163 aaKnown RBP1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 COMMD1Q8N668 190 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 SLC25A29Q8N8R3 303 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 LY6G5BQ8NDX9 201 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 DEFB108BQ8NET1 73 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 OR4P4Q8NGL7 312 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 FAM213BQ8TBF2 198 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 SUN5Q8TC36 379 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 DTD1Q8TEA8 209 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 CA5BP1Q8WTZ4 195 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 MBD3L1Q8WWY6 194 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 TNFRSF14Q92956 283 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 TMEM147Q9BVK8 224 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 SEC11CQ9BY50 192 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 NPCDR1Q9BY65 106 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 NKX6-2Q9C056 277 aaPredicted RBP1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 UQCC1Q9NVA1 299 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 BET1LQ9NYM9 111 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 PSENENQ9NZ42 101 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 TIMM9Q9Y5J7 89 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 CEP295Q9C0D2 2601 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 ANKHD1Q8IWZ3 2542 aaKnown RBP1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 MAP1BP46821 2468 aaKnown RBP1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 PKD1L2Q7Z442 2459 aa1.76□□□□□ -2.13
HMGB1P11-201ENST00000413899 COL6A6A6NMZ7 2263 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 SPTBN4Q9H254 2564 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 TRBV20OR9-2A0A075B6H5 130 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 A0A096LNT2 108 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 TRGV10A0A0A0MS01 117 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 BORCS7-ASMTA0A0B4J1R7 106 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 TRAV38-1A0A0B4J264 116 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 A0A1B0GV50 99 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 hADV38S2A0JD32 116 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 IGLC7A0M8Q6 106 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 MAP1LC3B2A6NCE7 125 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 A8MWL6 223 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 UMAD1C9J7I0 102 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 APOC3P02656 99 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 RBP4P02753 201 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 CRYGCP07315 174 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 FBP1P09467 338 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 OR13C7P0DN81 318 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 BCL2P10415 239 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 NQO2P16083 231 aa1.75□□□□□ -2.13
HMGB1P11-201ENST00000413899 PVALBP20472 110 aaPredicted RBP1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 181.6 ms