RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 PAX8Q06710 450 aa11.37□□□□□ -0.59
SEMA3F-202ENST00000413852 PIP4P1Q86T03 277 aa11.37□□□□□ -0.59
SEMA3F-202ENST00000413852 AAMDCQ9H7C9 122 aa11.37□□□□□ -0.59
SEMA3F-202ENST00000413852 ANKHD1Q8IWZ3 2542 aaKnown RBP11.37□□□□□ -0.59
SEMA3F-202ENST00000413852 NCBP2LA6PVI3 153 aaKnown RBP11.37□□□□□ -0.59
SEMA3F-202ENST00000413852 F8W735 103 aaPredicted RBP11.37□□□□□ -0.59
SEMA3F-202ENST00000413852 PRSS1P07477 247 aa11.37□□□□□ -0.59
SEMA3F-202ENST00000413852 C3orf36Q3SXR2 165 aa11.37□□□□□ -0.59
SEMA3F-202ENST00000413852 SMAD5-AS1Q9Y6J3 95 aa11.37□□□□□ -0.59
SEMA3F-202ENST00000413852 LGALS9BQ3B8N2 356 aa11.36□□□□□ -0.59
SEMA3F-202ENST00000413852 LGALS9CQ6DKI2 356 aa11.36□□□□□ -0.59
SEMA3F-202ENST00000413852 PRR25Q96S07 402 aa11.36□□□□□ -0.59
SEMA3F-202ENST00000413852 A6NDN8 102 aa11.36□□□□□ -0.59
SEMA3F-202ENST00000413852 IGHG4P01861 327 aa11.36□□□□□ -0.59
SEMA3F-202ENST00000413852 ZNF493Q6ZR52 646 aa11.36□□□□□ -0.59
SEMA3F-202ENST00000413852 FANCD2OSQ96PS1 177 aa11.36□□□□□ -0.59
SEMA3F-202ENST00000413852 J3KRW8 73 aa11.35□□□□□ -0.59
SEMA3F-202ENST00000413852 A0A1W2PPM0 123 aa11.35□□□□□ -0.59
SEMA3F-202ENST00000413852 TRGV3P03979 118 aa11.35□□□□□ -0.59
SEMA3F-202ENST00000413852 DYNAPQ8N1N2 210 aa11.35□□□□□ -0.59
SEMA3F-202ENST00000413852 RNF185Q96GF1 192 aa11.35□□□□□ -0.59
SEMA3F-202ENST00000413852 FOXC2Q99958 501 aa11.35□□□□□ -0.59
SEMA3F-202ENST00000413852 HSD52Q0P140 79 aa11.35□□□□□ -0.59
SEMA3F-202ENST00000413852 GTF2H5Q6ZYL4 71 aa11.35□□□□□ -0.59
SEMA3F-202ENST00000413852 C8orf31Q8N9H6 132 aa11.35□□□□□ -0.59
SEMA3F-202ENST00000413852 U3KQK5 164 aa11.35□□□□□ -0.59
SEMA3F-202ENST00000413852 TMEM238C9JI98 176 aa11.34□□□□□ -0.59
SEMA3F-202ENST00000413852 PRRG2O14669 202 aa11.34□□□□□ -0.59
SEMA3F-202ENST00000413852 TMEM160Q9NX00 188 aa11.34□□□□□ -0.59
SEMA3F-202ENST00000413852 G3V4G9 280 aa11.34□□□□□ -0.59
SEMA3F-202ENST00000413852 NHP2Q9NX24 153 aaKnown RBP11.34□□□□□ -0.59
SEMA3F-202ENST00000413852 PAX2Q02962 417 aa11.33□□□□□ -0.59
SEMA3F-202ENST00000413852 ASCL5Q7RTU5 278 aa11.33□□□□□ -0.59
SEMA3F-202ENST00000413852 MAPKAPK5-AS1Q8N8E1 139 aa11.33□□□□□ -0.59
SEMA3F-202ENST00000413852 KAAG1Q9UBP8 84 aa11.33□□□□□ -0.59
SEMA3F-202ENST00000413852 AGRNO00468 2067 aa11.33□□□□□ -0.6
SEMA3F-202ENST00000413852 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.33□□□□□ -0.6
SEMA3F-202ENST00000413852 SAMD5Q5TGI4 173 aa11.33□□□□□ -0.6
SEMA3F-202ENST00000413852 TMEM158Q8WZ71 300 aa11.33□□□□□ -0.6
SEMA3F-202ENST00000413852 JKAMPQ9P055 326 aa11.33□□□□□ -0.6
SEMA3F-202ENST00000413852 TEX48A0A1B0GUV7 120 aa11.33□□□□□ -0.6
SEMA3F-202ENST00000413852 IL17RELQ6ZVW7 336 aa11.33□□□□□ -0.6
SEMA3F-202ENST00000413852 GATD1Q8NB37 220 aa11.33□□□□□ -0.6
SEMA3F-202ENST00000413852 NPFFR1Q9GZQ6 430 aa11.33□□□□□ -0.6
SEMA3F-202ENST00000413852 NBR2O15453 112 aa11.32□□□□□ -0.6
SEMA3F-202ENST00000413852 RPS20P60866 119 aaKnown RBP11.32□□□□□ -0.6
SEMA3F-202ENST00000413852 AMTNQ6UX39 209 aa11.32□□□□□ -0.6
SEMA3F-202ENST00000413852 ZNF562Q6V9R5 426 aa11.32□□□□□ -0.6
SEMA3F-202ENST00000413852 KLK15Q9H2R5 256 aa11.32□□□□□ -0.6
SEMA3F-202ENST00000413852 HHLA3Q9XRX5 114 aa11.32□□□□□ -0.6
SEMA3F-202ENST00000413852 CUBNO60494 3623 aa11.32□□□□□ -0.6
SEMA3F-202ENST00000413852 TRAV40A0A0B4J280 105 aa11.32□□□□□ -0.6
SEMA3F-202ENST00000413852 C11orf21Q9P2W6 132 aa11.32□□□□□ -0.6
SEMA3F-202ENST00000413852 LY6LH3BQJ8 138 aa11.31□□□□□ -0.6
SEMA3F-202ENST00000413852 TNFRSF6BO95407 300 aa11.31□□□□□ -0.6
SEMA3F-202ENST00000413852 EFNA4P52798 201 aa11.31□□□□□ -0.6
SEMA3F-202ENST00000413852 ODF1Q14990 250 aa11.31□□□□□ -0.6
SEMA3F-202ENST00000413852 CFHR4Q92496 578 aa11.31□□□□□ -0.6
SEMA3F-202ENST00000413852 FCER1GP30273 86 aa11.31□□□□□ -0.6
SEMA3F-202ENST00000413852 ZC2HC1BQ5TFG8 222 aa11.31□□□□□ -0.6
SEMA3F-202ENST00000413852 IGFL3Q6UXB1 125 aa11.31□□□□□ -0.6
SEMA3F-202ENST00000413852 TMEM8BA6NDV4 472 aa11.31□□□□□ -0.6
SEMA3F-202ENST00000413852 CHAC1Q9BUX1 264 aa11.31□□□□□ -0.6
SEMA3F-202ENST00000413852 GTSF1LQ9H1H1 148 aa11.31□□□□□ -0.6
SEMA3F-202ENST00000413852 COL6A6A6NMZ7 2263 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 TRBV6-1A0A0K0K1D8 114 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 DEFB1P60022 68 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 SFTA2Q6UW10 78 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 C21orf62Q9NYP8 219 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 UFC1Q9Y3C8 167 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 FAM90A27PA6NNH2 459 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 NDUFA3O95167 84 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 MFAP4P55083 255 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 WFDC2Q14508 124 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 Q6AWC8 147 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 NEGR1Q7Z3B1 354 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 SH2D6Q7Z4S9 175 aa11.3□□□□□ -0.6
SEMA3F-202ENST00000413852 TRBV25-1A0A075B6N4 114 aa11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 A0A1B0GW15 77 aa11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 IGLC6P0CF74 106 aa11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 SMIM13P0DJ93 91 aa11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 FABP2P12104 132 aa11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 DTX2Q86UW9 622 aa11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 Q8NA96 180 aa11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 OR9G4Q8NGQ1 327 aa11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 MAP1LC3AQ9H492 121 aa11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 MRPL35Q9NZE8 188 aaKnown RBP11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 IGLV11-55A0A075B6I3 123 aa11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 CTSGP08311 255 aa11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 LYPD1Q8N2G4 141 aa11.29□□□□□ -0.6
SEMA3F-202ENST00000413852 ZNF672Q499Z4 452 aaPredicted RBP11.28□□□□□ -0.6
SEMA3F-202ENST00000413852 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.28□□□□□ -0.6
SEMA3F-202ENST00000413852 IGF1P05019 195 aa11.28□□□□□ -0.6
SEMA3F-202ENST00000413852 OR4X2Q8NGF9 303 aa11.28□□□□□ -0.6
SEMA3F-202ENST00000413852 SPTAN1Q13813 2472 aaKnown RBP11.28□□□□□ -0.6
SEMA3F-202ENST00000413852 C5orf64Q2M2E5 130 aa11.28□□□□□ -0.6
SEMA3F-202ENST00000413852 DPM3Q9P2X0 92 aa11.28□□□□□ -0.6
SEMA3F-202ENST00000413852 IGKV3D-20A0A0C4DH25 116 aa11.27□□□□□ -0.61
SEMA3F-202ENST00000413852 LINC01548A6NM66 108 aa11.27□□□□□ -0.61
SEMA3F-202ENST00000413852 CDSNQ15517 529 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms