RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 USF3Q68DE3 2245 aa-1.42□□□□□ -2.64
RNU2-55P-201ENST00000411146 J3QRK9 145 aa-1.42□□□□□ -2.64
RNU2-55P-201ENST00000411146 DCTN3O75935 186 aa-1.42□□□□□ -2.64
RNU2-55P-201ENST00000411146 CALB1P05937 261 aa-1.42□□□□□ -2.64
RNU2-55P-201ENST00000411146 OCM2P0CE71 109 aa-1.42□□□□□ -2.64
RNU2-55P-201ENST00000411146 ATP5G3P48201 142 aa-1.42□□□□□ -2.64
RNU2-55P-201ENST00000411146 WFDC2Q14508 124 aa-1.42□□□□□ -2.64
RNU2-55P-201ENST00000411146 VMA21Q3ZAQ7 101 aa-1.42□□□□□ -2.64
RNU2-55P-201ENST00000411146 ZNF714Q96N38 554 aa-1.42□□□□□ -2.64
RNU2-55P-201ENST00000411146 FMN1Q68DA7 1419 aa-1.42□□□□□ -2.64
RNU2-55P-201ENST00000411146 CDK12Q9NYV4 1490 aaPredicted RBP-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 A0A087WUJ7 227 aa-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 HSBP1L1C9JCN9 74 aa-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 DEXIO95424 95 aa-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 GYPBP06028 91 aa-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 ARPP19P56211 112 aa-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 SNCBQ16143 134 aa-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 IAH1Q2TAA2 248 aaPredicted RBP-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 HACD4Q5VWC8 232 aa-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 ISOC1Q96CN7 298 aa-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 BIN3Q9NQY0 253 aa-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 ADGRL3Q9HAR2 1447 aa-1.43□□□□□ -2.64
RNU2-55P-201ENST00000411146 CDK13Q14004 1512 aaKnown RBP-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 DNAH6Q9C0G6 4158 aa-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 GVQW2A0A096LPI5 108 aaPredicted RBP-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 FAM159BA6NKW6 160 aa-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 CLDN24A6NM45 220 aa-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 CNPY4Q8N129 248 aa-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 CLDN22Q8N7P3 220 aa-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 DSCR8Q96T75 97 aa-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 CMSS1Q9BQ75 279 aaKnown RBP-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 CHMP4BQ9H444 224 aaKnown RBP-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 CACYBPQ9HB71 228 aaKnown RBP-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 COMMD3Q9UBI1 195 aa-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 ZCCHC6Q5VYS8 1495 aaKnown RBP-1.44□□□□□ -2.64
RNU2-55P-201ENST00000411146 USP9YO00507 2555 aaPredicted RBP-1.45□□□□□ -2.64
RNU2-55P-201ENST00000411146 NEBP20929 6669 aa-1.45□□□□□ -2.64
RNU2-55P-201ENST00000411146 F2Z2F3 143 aa-1.45□□□□□ -2.64
RNU2-55P-201ENST00000411146 RER1O15258 196 aa-1.45□□□□□ -2.64
RNU2-55P-201ENST00000411146 INSL3P51460 131 aa-1.45□□□□□ -2.64
RNU2-55P-201ENST00000411146 FAM151BQ6UXP7 276 aa-1.45□□□□□ -2.64
RNU2-55P-201ENST00000411146 CYP4F30PQ9H0H9 118 aa-1.45□□□□□ -2.64
RNU2-55P-201ENST00000411146 MRPL36Q9P0J6 103 aaKnown RBP-1.45□□□□□ -2.64
RNU2-55P-201ENST00000411146 GUCA1BQ9UMX6 200 aa-1.45□□□□□ -2.64
RNU2-55P-201ENST00000411146 BLMP54132 1417 aaPredicted RBP-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 M0R3E3 92 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 GGCTO75223 188 aaKnown RBP-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 IGF2P01344 180 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 IGKCP01834 107 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 TMBIM6P55061 237 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 POU6F1Q14863 301 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 MSMO1Q15800 293 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 Q5XG85 94 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 GOLT1AQ6ZVE7 132 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 FAM9CQ8IZT9 166 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 TEX37Q96LM6 180 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 VPS29Q9UBQ0 182 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 PIK3C2AO00443 1686 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 DOPEY1Q5JWR5 2465 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 AKAP11Q9UKA4 1901 aa-1.46□□□□□ -2.64
RNU2-55P-201ENST00000411146 CCDC144AA2RUR9 1427 aa-1.47□□□□□ -2.64
RNU2-55P-201ENST00000411146 TRBV19A0A075B6N1 114 aa-1.47□□□□□ -2.64
RNU2-55P-201ENST00000411146 A0A087WTM6 91 aa-1.47□□□□□ -2.64
RNU2-55P-201ENST00000411146 HIGD1CA8MV81 97 aa-1.47□□□□□ -2.64
RNU2-55P-201ENST00000411146 PDE6DO43924 150 aa-1.47□□□□□ -2.64
RNU2-55P-201ENST00000411146 SERPINA6P08185 405 aa-1.47□□□□□ -2.64
RNU2-55P-201ENST00000411146 RBM3P98179 157 aaKnown RBP-1.47□□□□□ -2.64
RNU2-55P-201ENST00000411146 BORCS7Q96B45 105 aa-1.47□□□□□ -2.64
RNU2-55P-201ENST00000411146 AP1S3Q96PC3 154 aa-1.47□□□□□ -2.64
RNU2-55P-201ENST00000411146 BPESC1Q9GZL8 116 aa-1.47□□□□□ -2.64
RNU2-55P-201ENST00000411146 PRELID3BQ9Y3B1 194 aa-1.47□□□□□ -2.64
RNU2-55P-201ENST00000411146 ANKRD31Q8N7Z5 1873 aa-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 A0A0A6YYH2 397 aa-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 C3orf85A0A1B0GTC6 90 aa-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 A6NJ64 397 aa-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 IFNA16P05015 189 aa-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 NFYBP25208 207 aa-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 ERP29P30040 261 aaKnown RBP-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 SPRR1AP35321 89 aa-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 Q5VSD8 79 aa-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 GRPEL2Q8TAA5 225 aa-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 TAF9BQ9HBM6 251 aa-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 ENY2Q9NPA8 101 aa-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 PRO0255Q9UI72 69 aa-1.48□□□□□ -2.65
RNU2-55P-201ENST00000411146 URB1O60287 2271 aaKnown RBP-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 HECTD1Q9ULT8 2610 aa-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 C9JAW5 83 aa-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 LYRM1O43325 122 aa-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 IFNA5P01569 189 aa-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 TCRBP04435 133 aa-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 IQCJQ1A5X6 159 aa-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 KRTAP6-2Q3LI66 62 aa-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 FAM216BQ8N7L0 139 aa-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 CNFNQ9BYD5 112 aa-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 MRPS26Q9BYN8 205 aaKnown RBP-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 USE1Q9NZ43 259 aa-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 FGD6Q6ZV73 1430 aa-1.49□□□□□ -2.65
RNU2-55P-201ENST00000411146 MYH1P12882 1939 aa-1.5□□□□□ -2.65
RNU2-55P-201ENST00000411146 LYPLA2O95372 231 aa-1.5□□□□□ -2.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms