RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
SHANK2-204ENST00000409530 LINC01551Q86U37 167 aa11.73□□□□□ -0.53
SHANK2-204ENST00000409530 FMC1Q96HJ9 113 aa11.73□□□□□ -0.53
SHANK2-204ENST00000409530 TCEAL7Q9BRU2 100 aa11.73□□□□□ -0.53
SHANK2-204ENST00000409530 SMCO4Q9NRQ5 59 aa11.73□□□□□ -0.53
SHANK2-204ENST00000409530 COLCA2A8K830 154 aa11.72□□□□□ -0.53
SHANK2-204ENST00000409530 IGLV2-11P01706 119 aa11.72□□□□□ -0.53
SHANK2-204ENST00000409530 C8orf49Q96NF6 230 aa11.72□□□□□ -0.53
SHANK2-204ENST00000409530 ZNF747Q9BV97 191 aa11.72□□□□□ -0.53
SHANK2-204ENST00000409530 GPR61Q9BZJ8 451 aa11.72□□□□□ -0.53
SHANK2-204ENST00000409530 PSG8Q9UQ74 426 aa11.72□□□□□ -0.53
SHANK2-204ENST00000409530 TMEM75Q8N9X5 138 aa11.72□□□□□ -0.53
SHANK2-204ENST00000409530 NOTCH3Q9UM47 2321 aa11.72□□□□□ -0.53
SHANK2-204ENST00000409530 DEFB131AP59861 70 aa11.71□□□□□ -0.53
SHANK2-204ENST00000409530 C12orf57Q99622 126 aa11.71□□□□□ -0.53
SHANK2-204ENST00000409530 AGRNO00468 2067 aa11.71□□□□□ -0.54
SHANK2-204ENST00000409530 APRG1Q8IVJ8 170 aa11.71□□□□□ -0.54
SHANK2-204ENST00000409530 C15orf54Q8N8G6 183 aa11.71□□□□□ -0.54
SHANK2-204ENST00000409530 C7orf77A4D0Y5 90 aa11.7□□□□□ -0.54
SHANK2-204ENST00000409530 C9JCJ5 164 aa11.7□□□□□ -0.54
SHANK2-204ENST00000409530 TMEM78Q5T7P6 136 aa11.7□□□□□ -0.54
SHANK2-204ENST00000409530 OR10J6PQ8NGY7 276 aa11.7□□□□□ -0.54
SHANK2-204ENST00000409530 RNASE7Q9H1E1 156 aaKnown RBP11.7□□□□□ -0.54
SHANK2-204ENST00000409530 KNCNA6PVL3 124 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 LTAP01374 205 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 IGLV2-8P01709 118 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 TAS2R60P59551 318 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 OR4B1Q8NGF8 309 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 AGPAT4-IT1Q9H0P7 198 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 OR4C46A6NHA9 309 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 IGLV1-51P01701 117 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 IGLL1P15814 213 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 RNF212Q495C1 297 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 SHISA2Q6UWI4 295 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 SPAG8Q99932 426 aaPredicted RBP11.69□□□□□ -0.54
SHANK2-204ENST00000409530 WFDC10AQ9H1F0 79 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 KLF12Q9Y4X4 402 aa11.69□□□□□ -0.54
SHANK2-204ENST00000409530 PNRC1Q12796 327 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-204ENST00000409530 ACTL10Q5JWF8 245 aa11.68□□□□□ -0.54
SHANK2-204ENST00000409530 OR8A1Q8NGG7 326 aa11.68□□□□□ -0.54
SHANK2-204ENST00000409530 ISOC2Q96AB3 205 aa11.68□□□□□ -0.54
SHANK2-204ENST00000409530 MRPL53Q96EL3 112 aaKnown RBP11.68□□□□□ -0.54
SHANK2-204ENST00000409530 ZC2HC1AQ96GY0 325 aa11.68□□□□□ -0.54
SHANK2-204ENST00000409530 MDFIQ99750 246 aa11.68□□□□□ -0.54
SHANK2-204ENST00000409530 TUBA4BQ9H853 241 aa11.68□□□□□ -0.54
SHANK2-204ENST00000409530 MAP6D1Q9H9H5 199 aa11.68□□□□□ -0.54
SHANK2-204ENST00000409530 NDUFS6O75380 124 aaKnown RBP11.68□□□□□ -0.54
SHANK2-204ENST00000409530 ERVFC1-1P60608 527 aa11.68□□□□□ -0.54
SHANK2-204ENST00000409530 RAB5BP61020 215 aa11.68□□□□□ -0.54
SHANK2-204ENST00000409530 S100A12P80511 92 aa11.68□□□□□ -0.54
SHANK2-204ENST00000409530 SIGLEC8Q9NYZ4 499 aa11.68□□□□□ -0.54
SHANK2-204ENST00000409530 ZFP82Q8N141 532 aa11.67□□□□□ -0.54
SHANK2-204ENST00000409530 ZNF256Q9Y2P7 627 aaPredicted RBP11.67□□□□□ -0.54
SHANK2-204ENST00000409530 SERTM2A0A1B0GWG4 89 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 MT-ND4LP03901 98 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 CD7P09564 240 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 SAMD13Q5VXD3 122 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 SFRP2Q96HF1 295 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 NDFIP1Q9BT67 221 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 CLEC5AQ9NY25 188 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 URGCP-MRPS24S4R325 110 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 PKD1L1Q8TDX9 2849 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 CA1P00915 261 aaPredicted RBP11.66□□□□□ -0.54
SHANK2-204ENST00000409530 ZNF138P52744 262 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 FXYD7P58549 80 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 RHEBQ15382 184 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 ODF3L2Q3SX64 289 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 EBLN2Q6P2I7 272 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 LINC00322Q6ZN03 302 aaPredicted RBP11.66□□□□□ -0.54
SHANK2-204ENST00000409530 PRR25Q96S07 402 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 PPP1R14DQ9NXH3 145 aa11.66□□□□□ -0.54
SHANK2-204ENST00000409530 C1orf196B1AJZ1 125 aa11.65□□□□□ -0.54
SHANK2-204ENST00000409530 S100A9P06702 114 aaKnown RBP11.65□□□□□ -0.54
SHANK2-204ENST00000409530 KIR3DS1Q14943 382 aa11.65□□□□□ -0.54
SHANK2-204ENST00000409530 IBA57Q5T440 356 aaKnown RBP11.65□□□□□ -0.54
SHANK2-204ENST00000409530 C9orf66Q5T8R8 295 aa11.65□□□□□ -0.54
SHANK2-204ENST00000409530 TMEM183AQ8IXX5 376 aa11.65□□□□□ -0.54
SHANK2-204ENST00000409530 GCGP01275 180 aa11.65□□□□□ -0.55
SHANK2-204ENST00000409530 CT45A10P0DMU9 189 aa11.65□□□□□ -0.55
SHANK2-204ENST00000409530 TRAV25A0A0B4J276 109 aa11.64□□□□□ -0.55
SHANK2-204ENST00000409530 RBAKDNA6NC62 111 aa11.64□□□□□ -0.55
SHANK2-204ENST00000409530 C5orf52A6NGY3 159 aa11.64□□□□□ -0.55
SHANK2-204ENST00000409530 SNRPEP62304 92 aaKnown RBP11.64□□□□□ -0.55
SHANK2-204ENST00000409530 PRR9Q5T870 116 aa11.64□□□□□ -0.55
SHANK2-204ENST00000409530 Q6ZQT7 251 aa11.64□□□□□ -0.55
SHANK2-204ENST00000409530 C9orf47Q6ZRZ4 202 aa11.64□□□□□ -0.55
SHANK2-204ENST00000409530 ZNF492Q9P255 531 aa11.64□□□□□ -0.55
SHANK2-204ENST00000409530 TMSB15BA0A087X1C1 80 aa11.63□□□□□ -0.55
SHANK2-204ENST00000409530 A0A0J9YX75 114 aa11.63□□□□□ -0.55
SHANK2-204ENST00000409530 OR11H12B2RN74 326 aa11.63□□□□□ -0.55
SHANK2-204ENST00000409530 NPIPB6E9PJ23 425 aa11.63□□□□□ -0.55
SHANK2-204ENST00000409530 H7BYZ3 331 aa11.63□□□□□ -0.55
SHANK2-204ENST00000409530 M0R2Z0 102 aa11.63□□□□□ -0.55
SHANK2-204ENST00000409530 ZNF80P51504 273 aaPredicted RBP11.63□□□□□ -0.55
SHANK2-204ENST00000409530 RPL19P84098 196 aaKnown RBP11.63□□□□□ -0.55
SHANK2-204ENST00000409530 MLST8Q9BVC4 326 aa11.63□□□□□ -0.55
SHANK2-204ENST00000409530 ZFP30Q9Y2G7 519 aa11.63□□□□□ -0.55
SHANK2-204ENST00000409530 ANK2Q01484 3957 aa11.63□□□□□ -0.55
SHANK2-204ENST00000409530 TRAV12-2A0A075B6T6 113 aa11.63□□□□□ -0.55
SHANK2-204ENST00000409530 ZNF705GA8MUZ8 300 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms