RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 Q6ZSA8 131 aa11.12□□□□□ -0.63
CHMP3-203ENST00000409225 ZNF546Q86UE3 836 aa11.12□□□□□ -0.63
CHMP3-203ENST00000409225 MGAT4CQ9UBM8 478 aa11.12□□□□□ -0.63
CHMP3-203ENST00000409225 SSSCA1O60232 199 aa11.11□□□□□ -0.63
CHMP3-203ENST00000409225 METTL15P1P0C7V9 234 aa11.11□□□□□ -0.63
CHMP3-203ENST00000409225 C10orf113Q5VZT2 155 aa11.11□□□□□ -0.63
CHMP3-203ENST00000409225 TMEM37Q8WXS4 190 aa11.11□□□□□ -0.63
CHMP3-203ENST00000409225 ARPC5LQ9BPX5 153 aa11.11□□□□□ -0.63
CHMP3-203ENST00000409225 PKHD1L1Q86WI1 4243 aa11.11□□□□□ -0.63
CHMP3-203ENST00000409225 TRAV5A0A0B4J249 113 aa11.1□□□□□ -0.63
CHMP3-203ENST00000409225 M0R3E3 92 aa11.1□□□□□ -0.63
CHMP3-203ENST00000409225 AGPAT2O15120 278 aa11.1□□□□□ -0.63
CHMP3-203ENST00000409225 SFT2D2O95562 160 aa11.1□□□□□ -0.63
CHMP3-203ENST00000409225 GPX1P07203 203 aa11.1□□□□□ -0.63
CHMP3-203ENST00000409225 ID3Q02535 119 aa11.1□□□□□ -0.63
CHMP3-203ENST00000409225 PPP1R1AQ13522 171 aa11.1□□□□□ -0.63
CHMP3-203ENST00000409225 Q6ZQT7 251 aa11.1□□□□□ -0.63
CHMP3-203ENST00000409225 ZNF479Q96JC4 524 aa11.1□□□□□ -0.63
CHMP3-203ENST00000409225 FAM19A4Q96LR4 140 aa11.1□□□□□ -0.63
CHMP3-203ENST00000409225 TXNDC17Q9BRA2 123 aa11.1□□□□□ -0.63
CHMP3-203ENST00000409225 IGHV1OR15-1A0A075B7D0 117 aa11.09□□□□□ -0.63
CHMP3-203ENST00000409225 IGHV3-38A0A0C4DH36 116 aa11.09□□□□□ -0.63
CHMP3-203ENST00000409225 FNDC10F2Z333 226 aa11.09□□□□□ -0.63
CHMP3-203ENST00000409225 ORM1P02763 201 aa11.09□□□□□ -0.63
CHMP3-203ENST00000409225 GUK1Q16774 197 aa11.09□□□□□ -0.63
CHMP3-203ENST00000409225 C4orf46Q504U0 113 aa11.09□□□□□ -0.63
CHMP3-203ENST00000409225 PRR9Q5T870 116 aa11.09□□□□□ -0.63
CHMP3-203ENST00000409225 OR10P1Q8NGE3 313 aa11.09□□□□□ -0.63
CHMP3-203ENST00000409225 LINC00477Q96M19 166 aa11.09□□□□□ -0.63
CHMP3-203ENST00000409225 AGPAT4-IT1Q9H0P7 198 aa11.09□□□□□ -0.63
CHMP3-203ENST00000409225 IBA57-AS1B1ANH7 110 aa11.08□□□□□ -0.64
CHMP3-203ENST00000409225 TMEM14EPQ6UXP3 125 aa11.08□□□□□ -0.64
CHMP3-203ENST00000409225 MRPL53Q96EL3 112 aaKnown RBP11.08□□□□□ -0.64
CHMP3-203ENST00000409225 SMIM8Q96KF7 97 aa11.08□□□□□ -0.64
CHMP3-203ENST00000409225 RABL2AQ9UBK7 228 aaPredicted RBP11.08□□□□□ -0.64
CHMP3-203ENST00000409225 LOC100131303A0A0U1RQF7 123 aa11.07□□□□□ -0.64
CHMP3-203ENST00000409225 KRTAP10-4P60372 401 aaPredicted RBP11.07□□□□□ -0.64
CHMP3-203ENST00000409225 WFDC2Q14508 124 aa11.07□□□□□ -0.64
CHMP3-203ENST00000409225 LINC01556Q5JQF7 62 aa11.07□□□□□ -0.64
CHMP3-203ENST00000409225 SCXQ7RTU7 201 aa11.07□□□□□ -0.64
CHMP3-203ENST00000409225 IQCF2Q8IXL9 164 aa11.07□□□□□ -0.64
CHMP3-203ENST00000409225 RAB2BQ8WUD1 216 aa11.07□□□□□ -0.64
CHMP3-203ENST00000409225 BLNKQ8WV28 456 aa11.07□□□□□ -0.64
CHMP3-203ENST00000409225 MGST2Q99735 147 aa11.07□□□□□ -0.64
CHMP3-203ENST00000409225 RSL24D1Q9UHA3 163 aaKnown RBP11.07□□□□□ -0.64
CHMP3-203ENST00000409225 C9JCJ5 164 aa11.06□□□□□ -0.64
CHMP3-203ENST00000409225 CRISP2P16562 243 aa11.06□□□□□ -0.64
CHMP3-203ENST00000409225 FAUP35544 74 aaKnown RBP11.06□□□□□ -0.64
CHMP3-203ENST00000409225 ZFAND2AQ8N6M9 145 aa11.06□□□□□ -0.64
CHMP3-203ENST00000409225 OR10G4Q8NGN3 311 aa11.06□□□□□ -0.64
CHMP3-203ENST00000409225 DNAJC4Q9NNZ3 241 aa11.06□□□□□ -0.64
CHMP3-203ENST00000409225 IGKV2-40A0A087WW87 121 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-203ENST00000409225 ZNF253O75346 499 aa11.05□□□□□ -0.64
CHMP3-203ENST00000409225 IGKV2D-40P01614 121 aaPredicted RBP11.05□□□□□ -0.64
CHMP3-203ENST00000409225 PPT1P50897 306 aa11.05□□□□□ -0.64
CHMP3-203ENST00000409225 ARL16Q0P5N6 197 aa11.05□□□□□ -0.64
CHMP3-203ENST00000409225 NHLRC2Q8NBF2 726 aa11.05□□□□□ -0.64
CHMP3-203ENST00000409225 MCFD2Q8NI22 146 aa11.05□□□□□ -0.64
CHMP3-203ENST00000409225 SLC25A31Q9H0C2 315 aa11.05□□□□□ -0.64
CHMP3-203ENST00000409225 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.04□□□□□ -0.64
CHMP3-203ENST00000409225 TRBV19A0A075B6N1 114 aa11.04□□□□□ -0.64
CHMP3-203ENST00000409225 LECT2O14960 151 aa11.04□□□□□ -0.64
CHMP3-203ENST00000409225 SCGB1D2O95969 90 aa11.04□□□□□ -0.64
CHMP3-203ENST00000409225 IGHV3-30P01768 117 aa11.04□□□□□ -0.64
CHMP3-203ENST00000409225 IGHV3-33P01772 117 aa11.04□□□□□ -0.64
CHMP3-203ENST00000409225 IGHV3-30-3P0DP02 117 aa11.04□□□□□ -0.64
CHMP3-203ENST00000409225 IGHV3-30-5P0DP03 117 aa11.04□□□□□ -0.64
CHMP3-203ENST00000409225 SPCS2Q15005 226 aa11.04□□□□□ -0.64
CHMP3-203ENST00000409225 LINC01620Q4KN68 170 aa11.04□□□□□ -0.64
CHMP3-203ENST00000409225 SOSTQ9BQB4 213 aa11.04□□□□□ -0.64
CHMP3-203ENST00000409225 SRRQ9GZT4 340 aa11.04□□□□□ -0.64
CHMP3-203ENST00000409225 PRELID1Q9Y255 219 aa11.04□□□□□ -0.64
CHMP3-203ENST00000409225 NDUFB4O95168 129 aa11.03□□□□□ -0.64
CHMP3-203ENST00000409225 NMBP08949 121 aa11.03□□□□□ -0.64
CHMP3-203ENST00000409225 MUC21Q5SSG8 566 aa11.03□□□□□ -0.64
CHMP3-203ENST00000409225 TMEM78Q5T7P6 136 aa11.03□□□□□ -0.64
CHMP3-203ENST00000409225 MIC13Q5XKP0 118 aa11.03□□□□□ -0.64
CHMP3-203ENST00000409225 Q6ZRG5 221 aa11.03□□□□□ -0.64
CHMP3-203ENST00000409225 C9orf47Q6ZRZ4 202 aa11.03□□□□□ -0.64
CHMP3-203ENST00000409225 EXOC3-AS1Q8N2X6 119 aa11.03□□□□□ -0.64
CHMP3-203ENST00000409225 TIMM9Q9Y5J7 89 aa11.03□□□□□ -0.64
CHMP3-203ENST00000409225 RNF213Q63HN8 5207 aa11.03□□□□□ -0.64
CHMP3-203ENST00000409225 TRAV8-6A0A0B4J262 113 aa11.02□□□□□ -0.65
CHMP3-203ENST00000409225 CAMLGP49069 296 aa11.02□□□□□ -0.65
CHMP3-203ENST00000409225 TIRAPP58753 221 aa11.02□□□□□ -0.65
CHMP3-203ENST00000409225 OR10J3Q5JRS4 329 aa11.02□□□□□ -0.65
CHMP3-203ENST00000409225 SH2D6Q7Z4S9 175 aa11.02□□□□□ -0.65
CHMP3-203ENST00000409225 OR1L4Q8NGR5 311 aa11.02□□□□□ -0.65
CHMP3-203ENST00000409225 SLC25A21Q9BQT8 299 aaPredicted RBP11.02□□□□□ -0.65
CHMP3-203ENST00000409225 GGACTQ9BVM4 153 aa11.02□□□□□ -0.65
CHMP3-203ENST00000409225 TM2D2Q9BX73 214 aa11.02□□□□□ -0.65
CHMP3-203ENST00000409225 TSC22D2O75157 780 aa11.01□□□□□ -0.65
CHMP3-203ENST00000409225 HIST1H1EP10412 219 aaKnown RBP11.01□□□□□ -0.65
CHMP3-203ENST00000409225 TNFSF8P32971 234 aa11.01□□□□□ -0.65
CHMP3-203ENST00000409225 TOMM5Q8N4H5 51 aa11.01□□□□□ -0.65
CHMP3-203ENST00000409225 RASL10AQ92737 203 aa11.01□□□□□ -0.65
CHMP3-203ENST00000409225 TRAV4A0A0B4J268 109 aa11□□□□□ -0.65
CHMP3-203ENST00000409225 FABP12A6NFH5 140 aa11□□□□□ -0.65
CHMP3-203ENST00000409225 PYYP10082 97 aa11□□□□□ -0.65
CHMP3-203ENST00000409225 AP3S2P59780 193 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms