RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 SPTBN1Q01082 2364 aaKnown RBP10.39□□□□□ -0.75
RNF43-201ENST00000407977 NDUFS7O75251 213 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 CD59P13987 128 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 LINC01545Q5VT33 79 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 RNF166Q96A37 237 aaPredicted RBP10.38□□□□□ -0.75
RNF43-201ENST00000407977 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 IGHV2-70DA0A0C4DH43 119 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 OVOL3O00110 214 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 MORN5Q5VZ52 161 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 DEFB104AQ8WTQ1 72 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 VOPP1Q96AW1 172 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 IGHV3-53P01767 116 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 GAGE5Q13069 117 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 GAGE6Q13070 117 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 LYPD2Q6UXB3 125 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 FXYD5Q96DB9 178 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 VWC2Q2TAL6 325 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 CACNA1EQ15878 2313 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 TET1Q8NFU7 2136 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 ZDBF2Q9HCK1 2354 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 TRBV25-1A0A075B6N4 114 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 LTAP01374 205 aa10.38□□□□□ -0.75
RNF43-201ENST00000407977 RPL32P62910 135 aaKnown RBP10.38□□□□□ -0.75
RNF43-201ENST00000407977 SHISA9B4DS77 424 aa10.37□□□□□ -0.75
RNF43-201ENST00000407977 IGHV1OR15-1A0A075B7D0 117 aa10.37□□□□□ -0.75
RNF43-201ENST00000407977 UBE2E1P51965 193 aa10.37□□□□□ -0.75
RNF43-201ENST00000407977 DOPEY2Q9Y3R5 2298 aa10.37□□□□□ -0.75
RNF43-201ENST00000407977 DKK1O94907 266 aa10.36□□□□□ -0.75
RNF43-201ENST00000407977 ZNF493Q6ZR52 646 aa10.36□□□□□ -0.75
RNF43-201ENST00000407977 C8orf86Q6ZUL3 223 aa10.36□□□□□ -0.75
RNF43-201ENST00000407977 ZC2HC1AQ96GY0 325 aa10.36□□□□□ -0.75
RNF43-201ENST00000407977 SAA4P35542 130 aa10.36□□□□□ -0.75
RNF43-201ENST00000407977 A0A0G2JNJ9 132 aa10.36□□□□□ -0.75
RNF43-201ENST00000407977 IGLV3-1P01715 115 aa10.36□□□□□ -0.75
RNF43-201ENST00000407977 HERVK_113P63121 156 aa10.36□□□□□ -0.75
RNF43-201ENST00000407977 PRDM6Q9NQX0 595 aa10.36□□□□□ -0.75
RNF43-201ENST00000407977 Q9UFV3 132 aa10.36□□□□□ -0.75
RNF43-201ENST00000407977 NDUFA4O00483 81 aa10.35□□□□□ -0.75
RNF43-201ENST00000407977 WT1-ASQ06250 92 aa10.35□□□□□ -0.75
RNF43-201ENST00000407977 C17orf58Q2M2W7 97 aa10.35□□□□□ -0.75
RNF43-201ENST00000407977 C15orf53Q8NAA6 179 aa10.35□□□□□ -0.75
RNF43-201ENST00000407977 CFC1BP0CG36 223 aa10.35□□□□□ -0.75
RNF43-201ENST00000407977 CFC1P0CG37 223 aa10.35□□□□□ -0.75
RNF43-201ENST00000407977 TMEM105Q8N8V8 129 aa10.35□□□□□ -0.75
RNF43-201ENST00000407977 C15orf65H3BRN8 121 aa10.35□□□□□ -0.75
RNF43-201ENST00000407977 DEFB131AP59861 70 aa10.35□□□□□ -0.75
RNF43-201ENST00000407977 KIAA2026Q5HYC2 2103 aa10.35□□□□□ -0.75
RNF43-201ENST00000407977 Q8NFD4 153 aa10.35□□□□□ -0.75
RNF43-201ENST00000407977 MSRB2Q9Y3D2 182 aa10.35□□□□□ -0.75
RNF43-201ENST00000407977 K7EN84 100 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 IGLC1P0CG04 106 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 TMEM258P61165 79 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 Q6ZS92 163 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 ATP6V0E1O15342 81 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 RHOHQ15669 191 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 ANXA2RQ3ZCQ2 193 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 NTN5Q8WTR8 489 aaPredicted RBP10.34□□□□□ -0.75
RNF43-201ENST00000407977 TMEM126AQ9H061 195 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 GATA3P23771 443 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 HAMPP81172 84 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 LENEPQ9Y5L5 61 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 COL8A2P25067 703 aa10.34□□□□□ -0.75
RNF43-201ENST00000407977 TRIOBPQ9H2D6 2365 aa10.33□□□□□ -0.76
RNF43-201ENST00000407977 K7ERJ3 54 aa10.33□□□□□ -0.76
RNF43-201ENST00000407977 BRD3OSQ6XYD6 125 aa10.33□□□□□ -0.76
RNF43-201ENST00000407977 UBE2E2Q96LR5 201 aa10.33□□□□□ -0.76
RNF43-201ENST00000407977 WNK2Q9Y3S1 2297 aa10.33□□□□□ -0.76
RNF43-201ENST00000407977 IGHV1-69DA0A0B4J2H0 117 aa10.33□□□□□ -0.76
RNF43-201ENST00000407977 TEX36Q5VZQ5 186 aa10.33□□□□□ -0.76
RNF43-201ENST00000407977 DSCR8Q96T75 97 aa10.33□□□□□ -0.76
RNF43-201ENST00000407977 DKK2Q9UBU2 259 aa10.33□□□□□ -0.76
RNF43-201ENST00000407977 DOCK11Q5JSL3 2073 aa10.33□□□□□ -0.76
RNF43-201ENST00000407977 MRPL53Q96EL3 112 aaKnown RBP10.33□□□□□ -0.76
RNF43-201ENST00000407977 MED12Q93074 2177 aa10.33□□□□□ -0.76
RNF43-201ENST00000407977 AMTNQ6UX39 209 aa10.33□□□□□ -0.76
RNF43-201ENST00000407977 CCL25O15444 150 aa10.32□□□□□ -0.76
RNF43-201ENST00000407977 SYNJ2BPP57105 145 aa10.32□□□□□ -0.76
RNF43-201ENST00000407977 NSUN5P1Q3KNT7 163 aa10.32□□□□□ -0.76
RNF43-201ENST00000407977 POLEQ07864 2286 aa10.32□□□□□ -0.76
RNF43-201ENST00000407977 KLHL30-AS1Q8NEE0 82 aa10.32□□□□□ -0.76
RNF43-201ENST00000407977 TRAV26-2A0A0B4J265 109 aa10.32□□□□□ -0.76
RNF43-201ENST00000407977 RBAKDNA6NC62 111 aa10.32□□□□□ -0.76
RNF43-201ENST00000407977 RPL35AP18077 110 aaKnown RBP10.32□□□□□ -0.76
RNF43-201ENST00000407977 C8orf31Q8N9H6 132 aa10.32□□□□□ -0.76
RNF43-201ENST00000407977 PI4KAP42356 2102 aa10.31□□□□□ -0.76
RNF43-201ENST00000407977 E7EQL1 145 aa10.31□□□□□ -0.76
RNF43-201ENST00000407977 CRLF1O75462 422 aa10.31□□□□□ -0.76
RNF43-201ENST00000407977 SPINK13Q1W4C9 94 aa10.31□□□□□ -0.76
RNF43-201ENST00000407977 PFN2P35080 140 aa10.31□□□□□ -0.76
RNF43-201ENST00000407977 Q6ZR03 302 aa10.31□□□□□ -0.76
RNF43-201ENST00000407977 WDR86Q86TI4 376 aa10.31□□□□□ -0.76
RNF43-201ENST00000407977 ZNF561-AS1K7EIQ3 104 aa10.31□□□□□ -0.76
RNF43-201ENST00000407977 PRSS29PA6NIE9 313 aa10.3□□□□□ -0.76
RNF43-201ENST00000407977 C11orf44Q8N8P7 122 aa10.3□□□□□ -0.76
RNF43-201ENST00000407977 CASP8AP2Q9UKL3 1982 aa10.3□□□□□ -0.76
RNF43-201ENST00000407977 LOXP28300 417 aaPredicted RBP10.3□□□□□ -0.76
RNF43-201ENST00000407977 CRYBA4P53673 196 aa10.3□□□□□ -0.76
RNF43-201ENST00000407977 RSPO1Q2MKA7 263 aaPredicted RBP10.3□□□□□ -0.76
RNF43-201ENST00000407977 FANCMQ8IYD8 2048 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms