RNA–Protein interactions for RNA: ENST00000407637.5

HERC3-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 1 (best) BASIC

Gene HERC3, Length 2,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-203ENST00000407637 Q6ZQT7 251 aa10.02□□□□□ -0.81
HERC3-203ENST00000407637 SBSPONQ8IVN8 264 aa10.02□□□□□ -0.81
HERC3-203ENST00000407637 TTTY12Q9BZ98 90 aa10.02□□□□□ -0.81
HERC3-203ENST00000407637 UBE2D1P51668 147 aa10.02□□□□□ -0.81
HERC3-203ENST00000407637 PIP4P1Q86T03 277 aa10.02□□□□□ -0.81
HERC3-203ENST00000407637 DCHS1Q96JQ0 3298 aa10.01□□□□□ -0.81
HERC3-203ENST00000407637 LINC01559Q495D7 138 aa10.01□□□□□ -0.81
HERC3-203ENST00000407637 C3orf56Q8N813 242 aa10.01□□□□□ -0.81
HERC3-203ENST00000407637 RAB9BQ9NP90 201 aa10.01□□□□□ -0.81
HERC3-203ENST00000407637 FCN3O75636 299 aa10.01□□□□□ -0.81
HERC3-203ENST00000407637 EGR2P11161 476 aaPredicted RBP10.01□□□□□ -0.81
HERC3-203ENST00000407637 PLNP26678 52 aa10.01□□□□□ -0.81
HERC3-203ENST00000407637 EFNA4P52798 201 aa10.01□□□□□ -0.81
HERC3-203ENST00000407637 IL11RAQ14626 422 aa10.01□□□□□ -0.81
HERC3-203ENST00000407637 TMEM78Q5T7P6 136 aa10.01□□□□□ -0.81
HERC3-203ENST00000407637 LYRM7Q5U5X0 104 aa10.01□□□□□ -0.81
HERC3-203ENST00000407637 RASL11BQ9BPW5 248 aa10.01□□□□□ -0.81
HERC3-203ENST00000407637 DMDP11532 3685 aa10□□□□□ -0.81
HERC3-203ENST00000407637 MEIG1Q5JSS6 88 aa10□□□□□ -0.81
HERC3-203ENST00000407637 ZNF833PQ6ZTB9 187 aa10□□□□□ -0.81
HERC3-203ENST00000407637 MYOZ3Q8TDC0 251 aa10□□□□□ -0.81
HERC3-203ENST00000407637 NGBQ9NPG2 151 aa10□□□□□ -0.81
HERC3-203ENST00000407637 CTSZQ9UBR2 303 aa10□□□□□ -0.81
HERC3-203ENST00000407637 CCL11P51671 97 aa10□□□□□ -0.81
HERC3-203ENST00000407637 ZGRF1Q86YA3 2104 aa10□□□□□ -0.81
HERC3-203ENST00000407637 OR11H6Q8NGC7 330 aa10□□□□□ -0.81
HERC3-203ENST00000407637 PLEKHB2Q96CS7 222 aa10□□□□□ -0.81
HERC3-203ENST00000407637 M0QXV9 152 aa9.99□□□□□ -0.81
HERC3-203ENST00000407637 Q8N8P6 123 aa9.99□□□□□ -0.81
HERC3-203ENST00000407637 IGLV2-18A0A075B6J9 118 aa9.98□□□□□ -0.81
HERC3-203ENST00000407637 IGLC6P0CF74 106 aa9.98□□□□□ -0.81
HERC3-203ENST00000407637 SRSF9Q13242 221 aaKnown RBP eCLIP9.98□□□□□ -0.81
HERC3-203ENST00000407637 SCGB1D4Q6XE38 83 aa9.98□□□□□ -0.81
HERC3-203ENST00000407637 DEFB108BQ8NET1 73 aa9.98□□□□□ -0.81
HERC3-203ENST00000407637 AAMDCQ9H7C9 122 aa9.98□□□□□ -0.81
HERC3-203ENST00000407637 ZNF815PA8K554 130 aa9.98□□□□□ -0.81
HERC3-203ENST00000407637 IGLV2-23P01705 113 aa9.98□□□□□ -0.81
HERC3-203ENST00000407637 CD7P09564 240 aa9.98□□□□□ -0.81
HERC3-203ENST00000407637 ASIPP42127 132 aa9.98□□□□□ -0.81
HERC3-203ENST00000407637 RAXQ9Y2V3 346 aa9.98□□□□□ -0.81
HERC3-203ENST00000407637 IGKV2-40A0A087WW87 121 aaPredicted RBP9.97□□□□□ -0.81
HERC3-203ENST00000407637 SLC25A20O43772 301 aa9.97□□□□□ -0.81
HERC3-203ENST00000407637 IGKV2D-40P01614 121 aaPredicted RBP9.97□□□□□ -0.81
HERC3-203ENST00000407637 CECR9P0C854 216 aa9.97□□□□□ -0.81
HERC3-203ENST00000407637 ATP5J2P56134 94 aa9.97□□□□□ -0.81
HERC3-203ENST00000407637 C6orf15Q6UXA7 325 aaPredicted RBP9.97□□□□□ -0.81
HERC3-203ENST00000407637 NDUFA11Q86Y39 141 aa9.97□□□□□ -0.81
HERC3-203ENST00000407637 OR4C13Q8NGP0 309 aa9.97□□□□□ -0.81
HERC3-203ENST00000407637 SCNM1Q9BWG6 230 aa9.97□□□□□ -0.81
HERC3-203ENST00000407637 WDFY4Q6ZS81 3184 aa9.97□□□□□ -0.81
HERC3-203ENST00000407637 MED13Q9UHV7 2174 aa9.97□□□□□ -0.81
HERC3-203ENST00000407637 F8VRH5 84 aa9.97□□□□□ -0.81
HERC3-203ENST00000407637 J3KRW8 73 aa9.97□□□□□ -0.81
HERC3-203ENST00000407637 ZNF80P51504 273 aaPredicted RBP9.97□□□□□ -0.81
HERC3-203ENST00000407637 FAM216BQ8N7L0 139 aa9.97□□□□□ -0.81
HERC3-203ENST00000407637 Q8TAT8 98 aa9.97□□□□□ -0.81
HERC3-203ENST00000407637 C9JAW5 83 aa9.96□□□□□ -0.81
HERC3-203ENST00000407637 SCGB1C2P0DMR2 95 aa9.96□□□□□ -0.81
HERC3-203ENST00000407637 CRIP2P52943 208 aaPredicted RBP9.96□□□□□ -0.81
HERC3-203ENST00000407637 LAGE3Q14657 143 aa9.96□□□□□ -0.81
HERC3-203ENST00000407637 RASL10AQ92737 203 aa9.96□□□□□ -0.81
HERC3-203ENST00000407637 PRADC1Q9BSG0 188 aa9.96□□□□□ -0.81
HERC3-203ENST00000407637 SMG1Q96Q15 3661 aaKnown RBP9.96□□□□□ -0.82
HERC3-203ENST00000407637 H7C1H1 209 aa9.96□□□□□ -0.82
HERC3-203ENST00000407637 IGKV3-15P01624 115 aa9.96□□□□□ -0.82
HERC3-203ENST00000407637 MSMPQ1L6U9 139 aa9.96□□□□□ -0.82
HERC3-203ENST00000407637 Q6Q795 121 aa9.96□□□□□ -0.82
HERC3-203ENST00000407637 VKORC1Q9BQB6 163 aa9.96□□□□□ -0.82
HERC3-203ENST00000407637 ONECUT1Q9UBC0 465 aa9.96□□□□□ -0.82
HERC3-203ENST00000407637 MZT1Q08AG7 82 aa9.95□□□□□ -0.82
HERC3-203ENST00000407637 MRGPRG-AS1Q2M3A8 158 aa9.95□□□□□ -0.82
HERC3-203ENST00000407637 ZNF575Q86XF7 245 aa9.95□□□□□ -0.82
HERC3-203ENST00000407637 CCL13Q99616 98 aa9.95□□□□□ -0.82
HERC3-203ENST00000407637 SHANK2-AS3Q9BTD1 123 aa9.95□□□□□ -0.82
HERC3-203ENST00000407637 TRAV26-2A0A0B4J265 109 aa9.95□□□□□ -0.82
HERC3-203ENST00000407637 K7EM74 188 aa9.95□□□□□ -0.82
HERC3-203ENST00000407637 C15orf53Q8NAA6 179 aa9.95□□□□□ -0.82
HERC3-203ENST00000407637 H3BRN7 92 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 K7ESF4 209 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 TRPT1Q86TN4 253 aaKnown RBP9.94□□□□□ -0.82
HERC3-203ENST00000407637 DTX2Q86UW9 622 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 GAFA1Q96PS6 74 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 ODF3Q96PU9 254 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 DEFB127Q9H1M4 99 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 KLK15Q9H2R5 256 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 SPRY3O43610 288 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 ORM1P02763 201 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 SLC25A16P16260 332 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 C3orf36Q3SXR2 165 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 PVRIGQ6DKI7 326 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 LYPD1Q8N2G4 141 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 NTN5Q8WTR8 489 aaPredicted RBP9.94□□□□□ -0.82
HERC3-203ENST00000407637 PRR25Q96S07 402 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 MDFICQ9P1T7 246 aa9.94□□□□□ -0.82
HERC3-203ENST00000407637 TRGV3P03979 118 aa9.93□□□□□ -0.82
HERC3-203ENST00000407637 RAB1BQ9H0U4 201 aa9.93□□□□□ -0.82
HERC3-203ENST00000407637 PLCE1Q9P212 2302 aa9.93□□□□□ -0.82
HERC3-203ENST00000407637 LHBP01229 141 aa9.93□□□□□ -0.82
HERC3-203ENST00000407637 PLGLAQ15195 96 aa9.93□□□□□ -0.82
HERC3-203ENST00000407637 VMA21Q3ZAQ7 101 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms