RNA–Protein interactions for RNA: ENST00000405493.6

RAPGEF3-204, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 5,751 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-204ENST00000405493 LGALS1P09382 135 aaKnown RBP9.37□□□□□ -0.91
RAPGEF3-204ENST00000405493 PDE6HQ13956 83 aa9.37□□□□□ -0.91
RAPGEF3-204ENST00000405493 G3V318 75 aa9.37□□□□□ -0.91
RAPGEF3-204ENST00000405493 CD300EQ496F6 205 aaPredicted RBP9.37□□□□□ -0.91
RAPGEF3-204ENST00000405493 RNF182Q8N6D2 247 aa9.37□□□□□ -0.91
RAPGEF3-204ENST00000405493 TEX48A0A1B0GUV7 120 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 GAGE13Q4V321 117 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 OCIAD2Q56VL3 154 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 CENPVL3A0A0U1RRI6 287 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 IGHV3-53P01767 116 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 ESDP10768 282 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 CTSZQ9UBR2 303 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 SMPXQ9UHP9 88 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 MYCNOSP40205 109 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 BCL6BQ8N143 479 aaPredicted RBP9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 C18orf32Q8TCD1 76 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 UBE2E2Q96LR5 201 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 SLC25A2Q9BXI2 301 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 C11orf68Q9H3H3 251 aaKnown RBP9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 CST9LQ9H4G1 147 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 CACNA1AO00555 2505 aa9.36□□□□□ -0.91
RAPGEF3-204ENST00000405493 LHBP01229 141 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 GTF3C1Q12789 2109 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 LINC01559Q495D7 138 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 IL17DQ8TAD2 202 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 SHANK2-AS3Q9BTD1 123 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 HEATR5AQ86XA9 2040 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 Q86TA4 180 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 A0A0U1RRA0 63 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 TMEM89A2RUT3 159 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 COA6Q5JTJ3 125 aaKnown RBP9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 LINC00479Q96M42 142 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 TMEM14BQ9NUH8 114 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 DOCK7Q96N67 2140 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 MMP23AO75900 390 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 TEX43Q6ZNM6 134 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 NDUFA4L2Q9NRX3 87 aa9.35□□□□□ -0.91
RAPGEF3-204ENST00000405493 KIR3DS1Q14943 382 aa9.34□□□□□ -0.91
RAPGEF3-204ENST00000405493 PLXND1Q9Y4D7 1925 aa9.34□□□□□ -0.91
RAPGEF3-204ENST00000405493 SMKR1H3BMG3 65 aa9.34□□□□□ -0.91
RAPGEF3-204ENST00000405493 C15orf65H3BRN8 121 aa9.34□□□□□ -0.91
RAPGEF3-204ENST00000405493 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
RAPGEF3-204ENST00000405493 RSPO1Q2MKA7 263 aaPredicted RBP9.34□□□□□ -0.91
RAPGEF3-204ENST00000405493 C14orf178Q8N769 122 aaPredicted RBP9.34□□□□□ -0.91
RAPGEF3-204ENST00000405493 DPH3P1Q9H4G8 78 aa9.34□□□□□ -0.91
RAPGEF3-204ENST00000405493 KIAA2026Q5HYC2 2103 aa9.34□□□□□ -0.91
RAPGEF3-204ENST00000405493 IGHV4-38-2P0DP08 117 aa9.34□□□□□ -0.91
RAPGEF3-204ENST00000405493 NPC2P61916 151 aa9.34□□□□□ -0.91
RAPGEF3-204ENST00000405493 TRAV8-2A0A0B4J237 113 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 IGKV1-39P01597 117 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 IGLV3-1P01715 115 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 IGKV1D-39P04432 117 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 RMI2Q96E14 147 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 PAX2Q02962 417 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 LSM4Q9Y4Z0 139 aaKnown RBP9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 RHODO00212 210 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 SLAQ13239 276 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 C10orf126Q8N4M7 172 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 CYYR1Q96J86 154 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 ANAPC13Q9BS18 74 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 PGPEP1Q9NXJ5 209 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 DOCK11Q5JSL3 2073 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 ADAMTS9Q9P2N4 1935 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 INSL3P51460 131 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 C8orf49Q96NF6 230 aa9.33□□□□□ -0.92
RAPGEF3-204ENST00000405493 CSTL1Q9H114 145 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 A0A087WWL8 130 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 GHRHP01286 108 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 DEFB130BP0DP73 79 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 DEFB130AP0DP74 79 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 HAPLN4Q86UW8 402 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 ZNF114Q8NC26 417 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 GTSF1LQ9H1H1 148 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 PLA2G2EQ9NZK7 142 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 HIVEP2P31629 2446 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 KIR2DL5BA0A0G2JN68 375 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 KIR2DL5BA0A0G2JPC4 375 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 KIR2DL5AQ8N109 375 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 PYGO2Q9BRQ0 406 aa9.32□□□□□ -0.92
RAPGEF3-204ENST00000405493 F5H768 121 aa9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 SHISA2Q6UWI4 295 aa9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 V9GYV3 84 aa9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 A8MWV9 139 aa9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 C19orf84I3L1E1 186 aa9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 AMN1Q8IY45 258 aa9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 IGHV7-4-1A0A0J9YVY3 117 aa9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 STPG4Q8N801 248 aa9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 LINC00158P58513 81 aa9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 C11orf53Q8IXP5 236 aa9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 Q8NFD4 153 aa9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 SPAG8Q99932 426 aaPredicted RBP9.31□□□□□ -0.92
RAPGEF3-204ENST00000405493 IGLL1P15814 213 aa9.3□□□□□ -0.92
RAPGEF3-204ENST00000405493 TMEM75Q8N9X5 138 aa9.3□□□□□ -0.92
RAPGEF3-204ENST00000405493 TPSG1Q9NRR2 321 aa9.3□□□□□ -0.92
RAPGEF3-204ENST00000405493 DOCK10Q96BY6 2186 aa9.3□□□□□ -0.92
RAPGEF3-204ENST00000405493 PLNP26678 52 aa9.3□□□□□ -0.92
RAPGEF3-204ENST00000405493 TMEM95Q3KNT9 176 aa9.3□□□□□ -0.92
RAPGEF3-204ENST00000405493 KRTAP27-1Q3LI81 207 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms