RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 UFC1Q9Y3C8 167 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 CUL9Q8IWT3 2517 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 K7EIM0 57 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 INSL3P51460 131 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 TMEM158Q8WZ71 300 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 NCOR1P1Q9H4R4 102 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 CREBBPQ92793 2442 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 NCBP2LA6PVI3 153 aaKnown RBP7.5□□□□□ -1.21
SMC1B-202ENST00000404354 KLRD1Q13241 179 aa7.5□□□□□ -1.21
SMC1B-202ENST00000404354 TMEM8BA6NDV4 472 aa7.49□□□□□ -1.21
SMC1B-202ENST00000404354 EFNA4P52798 201 aa7.49□□□□□ -1.21
SMC1B-202ENST00000404354 ATP5G2Q06055 141 aa7.49□□□□□ -1.21
SMC1B-202ENST00000404354 NEGR1Q7Z3B1 354 aa7.49□□□□□ -1.21
SMC1B-202ENST00000404354 MAPKAPK5-AS1Q8N8E1 139 aa7.49□□□□□ -1.21
SMC1B-202ENST00000404354 TRBV25-1A0A075B6N4 114 aa7.49□□□□□ -1.21
SMC1B-202ENST00000404354 TMEM155Q4W5P6 130 aa7.49□□□□□ -1.21
SMC1B-202ENST00000404354 COL25A1Q9BXS0 654 aaPredicted RBP7.49□□□□□ -1.21
SMC1B-202ENST00000404354 WI2-2373I1.2A0A1W2PRP0 233 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 PRAC2D3DTV9 90 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 INS-IGF2F8WCM5 200 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 GFRALQ6UXV0 394 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 OR4X2Q8NGF9 303 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 OR9G4Q8NGQ1 327 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 C16orf97H3BN30 126 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 TGFAP01135 160 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 ZNF562Q6V9R5 426 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 SPG11Q96JI7 2443 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 BUB1B-PAK6H3BSN5 160 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 ZNF883P0CG24 379 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 PRR25Q96S07 402 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 MRPL35Q9NZE8 188 aaKnown RBP7.48□□□□□ -1.21
SMC1B-202ENST00000404354 ZFHX3Q15911 3703 aa7.48□□□□□ -1.21
SMC1B-202ENST00000404354 H3BRN7 92 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 TNFRSF6BO95407 300 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 TRGV3P03979 118 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 RBPJQ06330 500 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 RNASE6Q93091 150 aaKnown RBP7.47□□□□□ -1.21
SMC1B-202ENST00000404354 MAP1LC3AQ9H492 121 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 SORL1Q92673 2214 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 CLUHP3Q96NS8 147 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 A0A0G2JNJ9 132 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 DLX6P56179 175 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 ODF1Q14990 250 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 C16orf54Q6UWD8 224 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 DEFB123Q8N688 67 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 HIST1H4GQ99525 98 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 TMEM14CQ9P0S9 112 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 Q9UFV3 132 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 HHLA3Q9XRX5 114 aa7.47□□□□□ -1.21
SMC1B-202ENST00000404354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.47□□□□□ -1.21
SMC1B-202ENST00000404354 IGKCP01834 107 aa7.46□□□□□ -1.21
SMC1B-202ENST00000404354 THBDP07204 575 aa7.46□□□□□ -1.22
SMC1B-202ENST00000404354 ZNF479Q96JC4 524 aa7.46□□□□□ -1.22
SMC1B-202ENST00000404354 CYSLTR1Q9Y271 337 aa7.46□□□□□ -1.22
SMC1B-202ENST00000404354 FTH1P19P0C7X4 201 aa7.46□□□□□ -1.22
SMC1B-202ENST00000404354 OR5A1Q8NGJ0 315 aa7.46□□□□□ -1.22
SMC1B-202ENST00000404354 SIGMAR1Q99720 223 aa7.46□□□□□ -1.22
SMC1B-202ENST00000404354 CRYGBP07316 175 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 SMIM17P0DL12 118 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 HOXB4P17483 251 aaPredicted RBP7.45□□□□□ -1.22
SMC1B-202ENST00000404354 EMP1P54849 157 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 ZNF493Q6ZR52 646 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 IL17RELQ6ZVW7 336 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 DYNAPQ8N1N2 210 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 GAGE12HA6NDE8 117 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 PRRG2O14669 202 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 TMEM30BQ3MIR4 351 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 RNF185Q96GF1 192 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 NOTCH3Q9UM47 2321 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 BSNQ9UPA5 3926 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 E7EQL1 145 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 IGLV1-47P01700 117 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 DEFB1P60022 68 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 DTX2Q86UW9 622 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 LINC00311Q8N616 119 aa7.45□□□□□ -1.22
SMC1B-202ENST00000404354 IGKV3-7A0A075B6H7 116 aa7.44□□□□□ -1.22
SMC1B-202ENST00000404354 SPAG8Q99932 426 aaPredicted RBP7.44□□□□□ -1.22
SMC1B-202ENST00000404354 MRPS12O15235 138 aaKnown RBP7.44□□□□□ -1.22
SMC1B-202ENST00000404354 NDPQ00604 133 aa7.44□□□□□ -1.22
SMC1B-202ENST00000404354 Q6AWC8 147 aa7.44□□□□□ -1.22
SMC1B-202ENST00000404354 LINC01560Q8TB33 94 aa7.44□□□□□ -1.22
SMC1B-202ENST00000404354 A0A1B0GWB2 263 aa7.44□□□□□ -1.22
SMC1B-202ENST00000404354 IGLL5B9A064 214 aa7.44□□□□□ -1.22
SMC1B-202ENST00000404354 CIDEAO60543 219 aa7.44□□□□□ -1.22
SMC1B-202ENST00000404354 PAX8Q06710 450 aa7.44□□□□□ -1.22
SMC1B-202ENST00000404354 SCGB2A2Q13296 93 aa7.44□□□□□ -1.22
SMC1B-202ENST00000404354 CEND1Q8N111 149 aa7.44□□□□□ -1.22
SMC1B-202ENST00000404354 CFHR4Q92496 578 aa7.44□□□□□ -1.22
SMC1B-202ENST00000404354 SPOCK3Q9BQ16 436 aa7.44□□□□□ -1.22
SMC1B-202ENST00000404354 A0A1B0GW15 77 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 C19orf67A6NJJ6 358 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 DPM2O94777 84 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 ZNF418Q8TF45 676 aaPredicted RBP7.43□□□□□ -1.22
SMC1B-202ENST00000404354 C20orf78Q9BR46 151 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 HIF1ANQ9NWT6 349 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 IGF2RP11717 2491 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 LOC107984156A0A0G2JMH3 177 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 PRR30Q53SZ7 412 aaPredicted RBP7.43□□□□□ -1.22
SMC1B-202ENST00000404354 PLA2G2CQ5R387 149 aa7.43□□□□□ -1.22
SMC1B-202ENST00000404354 IGFL2Q6UWQ7 119 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms