RNA–Protein interactions for RNA: ENST00000404008.6

USP42-202, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 1,380 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-202ENST00000404008 BLOC1S1P78537 153 aa21.41■■□□□ 1.02
USP42-202ENST00000404008 SPINK13Q1W4C9 94 aa21.41■■□□□ 1.02
USP42-202ENST00000404008 CSNK1G2-AS1Q8NCQ2 148 aa21.41■■□□□ 1.02
USP42-202ENST00000404008 RNF183Q96D59 192 aa21.41■■□□□ 1.02
USP42-202ENST00000404008 ODF3Q96PU9 254 aa21.41■■□□□ 1.02
USP42-202ENST00000404008 EPDR1Q9UM22 224 aa21.41■■□□□ 1.02
USP42-202ENST00000404008 TP53TG1Q9Y2A0 90 aa21.41■■□□□ 1.02
USP42-202ENST00000404008 M0R2Z0 102 aa21.4■■□□□ 1.02
USP42-202ENST00000404008 TMEM78Q5T7P6 136 aa21.4■■□□□ 1.02
USP42-202ENST00000404008 GOLT1AQ6ZVE7 132 aa21.4■■□□□ 1.02
USP42-202ENST00000404008 ZNF680Q8NEM1 530 aa21.4■■□□□ 1.02
USP42-202ENST00000404008 RCHY1Q96PM5 261 aa21.4■■□□□ 1.02
USP42-202ENST00000404008 TCRAP04437 139 aa21.39■■□□□ 1.02
USP42-202ENST00000404008 CST9LP1Q5W188 147 aa21.39■■□□□ 1.02
USP42-202ENST00000404008 CCDC28AQ8IWP9 274 aa21.39■■□□□ 1.02
USP42-202ENST00000404008 OVOL2Q9BRP0 275 aa21.39■■□□□ 1.02
USP42-202ENST00000404008 SPRY2O43597 315 aa21.38■■□□□ 1.01
USP42-202ENST00000404008 AMBPP02760 352 aa21.38■■□□□ 1.01
USP42-202ENST00000404008 MANBALQ9NQG1 85 aa21.38■■□□□ 1.01
USP42-202ENST00000404008 GNG13Q9P2W3 67 aa21.38■■□□□ 1.01
USP42-202ENST00000404008 SERTM2A0A1B0GWG4 89 aa21.37■■□□□ 1.01
USP42-202ENST00000404008 IFNA7P01567 189 aa21.37■■□□□ 1.01
USP42-202ENST00000404008 ATP5G3P48201 142 aa21.37■■□□□ 1.01
USP42-202ENST00000404008 FAM19A4Q96LR4 140 aa21.37■■□□□ 1.01
USP42-202ENST00000404008 ZNF492Q9P255 531 aa21.37■■□□□ 1.01
USP42-202ENST00000404008 CRXO43186 299 aaPredicted RBP21.36■■□□□ 1.01
USP42-202ENST00000404008 CDKN1BP46527 198 aa21.36■■□□□ 1.01
USP42-202ENST00000404008 ZNF138P52744 262 aa21.36■■□□□ 1.01
USP42-202ENST00000404008 PMS2P11Q13670 270 aa21.36■■□□□ 1.01
USP42-202ENST00000404008 LYPD6BQ8NI32 183 aa21.36■■□□□ 1.01
USP42-202ENST00000404008 ATG101Q9BSB4 218 aa21.36■■□□□ 1.01
USP42-202ENST00000404008 TSPOP30536 169 aa21.36■■□□□ 1.01
USP42-202ENST00000404008 Q8TAT8 98 aa21.36■■□□□ 1.01
USP42-202ENST00000404008 IGF2BP2-AS1Q96M15 143 aa21.36■■□□□ 1.01
USP42-202ENST00000404008 TCEAL7Q9BRU2 100 aa21.36■■□□□ 1.01
USP42-202ENST00000404008 LEPP41159 167 aa21.35■■□□□ 1.01
USP42-202ENST00000404008 CYB561D1Q8N8Q1 229 aa21.35■■□□□ 1.01
USP42-202ENST00000404008 TRAV12-2A0A075B6T6 113 aa21.34■■□□□ 1.01
USP42-202ENST00000404008 TRAV8-1A0A0A6YYK1 113 aa21.34■■□□□ 1.01
USP42-202ENST00000404008 K7EQM0 130 aa21.34■■□□□ 1.01
USP42-202ENST00000404008 HIST1H2BAQ96A08 127 aa21.34■■□□□ 1.01
USP42-202ENST00000404008 PEX7O00628 323 aa21.33■■□□□ 1
USP42-202ENST00000404008 TRBV7-9A0A0J9YWB2 115 aa21.32■■□□□ 1
USP42-202ENST00000404008 C11orf94C9JXX5 98 aa21.32■■□□□ 1
USP42-202ENST00000404008 INSP01308 110 aa21.32■■□□□ 1
USP42-202ENST00000404008 IFNA1P01562 189 aa21.32■■□□□ 1
USP42-202ENST00000404008 CRISP2P16562 243 aa21.32■■□□□ 1
USP42-202ENST00000404008 KIR3DS1Q14943 382 aa21.32■■□□□ 1
USP42-202ENST00000404008 TMEM75Q8N9X5 138 aa21.31■■□□□ 1
USP42-202ENST00000404008 LENEPQ9Y5L5 61 aa21.31■■□□□ 1
USP42-202ENST00000404008 U3KQK5 164 aa21.31■■□□□ 1
USP42-202ENST00000404008 KLLNB2CW77 178 aa21.3■■□□□ 1
USP42-202ENST00000404008 IGLV2-11P01706 119 aa21.3■■□□□ 1
USP42-202ENST00000404008 NMBP08949 121 aa21.3■■□□□ 1
USP42-202ENST00000404008 GFI1BQ5VTD9 330 aa21.3■■□□□ 1
USP42-202ENST00000404008 ZNF705AQ6ZN79 300 aaPredicted RBP21.3■■□□□ 1
USP42-202ENST00000404008 C1orf158Q8N1D5 194 aa21.3■■□□□ 1
USP42-202ENST00000404008 OR11H2Q8NH07 326 aa21.3■■□□□ 1
USP42-202ENST00000404008 SGK494Q96LW2 274 aa21.3■■□□□ 1
USP42-202ENST00000404008 RARRES2Q99969 163 aa21.3■■□□□ 1
USP42-202ENST00000404008 F6UZH7 168 aa21.29■■□□□ 1
USP42-202ENST00000404008 J3KRW8 73 aa21.29■■□□□ 1
USP42-202ENST00000404008 BCL2P10415 239 aa21.29■■□□□ 1
USP42-202ENST00000404008 ZFAND2AQ8N6M9 145 aa21.29■■□□□ 1
USP42-202ENST00000404008 LINC00479Q96M42 142 aa21.29■■□□□ 1
USP42-202ENST00000404008 TXNDC17Q9BRA2 123 aa21.29■■□□□ 1
USP42-202ENST00000404008 GOLT1BQ9Y3E0 138 aa21.29■■□□□ 1
USP42-202ENST00000404008 FBLL1A6NHQ2 334 aaKnown RBP21.28■■□□□ 1
USP42-202ENST00000404008 RBMY1A1P0DJD3 496 aaKnown RBP21.28■■□□□ 1
USP42-202ENST00000404008 RBMY1CP0DJD4 496 aa21.28■■□□□ 1
USP42-202ENST00000404008 RBMY1FQ15415 496 aaKnown RBP21.28■■□□□ 1
USP42-202ENST00000404008 STAB2Q8WWQ8 2551 aa21.27■■□□□ 1
USP42-202ENST00000404008 PCNPQ8WW12 178 aaKnown RBP21.27■■□□□ 1
USP42-202ENST00000404008 PSG8Q9UQ74 426 aa21.27■■□□□ 1
USP42-202ENST00000404008 X6R8D5 127 aa21.27■■□□□ 1
USP42-202ENST00000404008 TRAV34A0A0B4J273 112 aa21.26■□□□□ 0.99
USP42-202ENST00000404008 TAGLN2P37802 199 aaKnown RBP21.26■□□□□ 0.99
USP42-202ENST00000404008 FLI1Q01543 452 aaPredicted RBP21.26■□□□□ 0.99
USP42-202ENST00000404008 MEF2BQ02080 365 aaPredicted RBP21.26■□□□□ 0.99
USP42-202ENST00000404008 PRR9Q5T870 116 aa21.26■□□□□ 0.99
USP42-202ENST00000404008 TVP23CQ96ET8 276 aa21.26■□□□□ 0.99
USP42-202ENST00000404008 VAX2Q9UIW0 290 aa21.26■□□□□ 0.99
USP42-202ENST00000404008 IGHV3OR16-12A0A075B7B8 117 aa21.25■□□□□ 0.99
USP42-202ENST00000404008 SCO2A0A1W2PP80 73 aa21.25■□□□□ 0.99
USP42-202ENST00000404008 GPX1P07203 203 aa21.25■□□□□ 0.99
USP42-202ENST00000404008 C20orf144Q9BQM9 153 aa21.25■□□□□ 0.99
USP42-202ENST00000404008 KLF12Q9Y4X4 402 aa21.25■□□□□ 0.99
USP42-202ENST00000404008 LOC102723971A0A1B0GUV8 181 aa21.24■□□□□ 0.99
USP42-202ENST00000404008 C7orf71A4D174 169 aa21.24■□□□□ 0.99
USP42-202ENST00000404008 BTN1A1Q13410 526 aa21.24■□□□□ 0.99
USP42-202ENST00000404008 PRNTQ86SH4 94 aa21.24■□□□□ 0.99
USP42-202ENST00000404008 TMEM208Q9BTX3 173 aa21.24■□□□□ 0.99
USP42-202ENST00000404008 TRAV12-3A0A0B4J271 114 aa21.23■□□□□ 0.99
USP42-202ENST00000404008 RNASE4P34096 147 aaKnown RBP21.23■□□□□ 0.99
USP42-202ENST00000404008 TMEM256Q8N2U0 113 aa21.23■□□□□ 0.99
USP42-202ENST00000404008 C2CD4CQ8TF44 421 aa21.23■□□□□ 0.99
USP42-202ENST00000404008 FMC1Q96HJ9 113 aa21.23■□□□□ 0.99
USP42-202ENST00000404008 C11orf52Q96A22 123 aa21.23■□□□□ 0.99
USP42-202ENST00000404008 NEU1Q99519 415 aa21.23■□□□□ 0.99
USP42-202ENST00000404008 NDFIP1Q9BT67 221 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms