RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 C19orf84I3L1E1 186 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 K7EQD1 137 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 M0R378 163 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 CD5LO43866 347 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 NXPH4O95158 308 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 TRACP01848 142 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 IGHG1P01857 330 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 CXCL1P09341 107 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 SYNJ2BPP57105 145 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 HMGN3Q15651 99 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 FAM182AQ5T1J6 154 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 MRPL2Q5T653 305 aaKnown RBP2.95□□□□□ -1.94
CLHC1-201ENST00000401408 MARCH3Q86UD3 253 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 OR5D16Q8NGK9 328 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 STAG3L4Q8TBR4 150 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 RAB37Q96AX2 223 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 RBMXL1Q96E39 390 aaKnown RBP2.95□□□□□ -1.94
CLHC1-201ENST00000401408 TIMM17AQ99595 171 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 AGPAT4-IT1Q9H0P7 198 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 SIX2Q9NPC8 291 aa2.95□□□□□ -1.94
CLHC1-201ENST00000401408 SCN2AQ99250 2005 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 CCDC88CQ9P219 2028 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 TRAV12-2A0A075B6T6 113 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 IGHV1OR15-1A0A075B7D0 117 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 IGKV1D-43A0A0B4J1Z2 117 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 KRTAP23-1A1A580 65 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 ZNF860A6NHJ4 632 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 INAFM1C9JVW0 142 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 SOCS1O15524 211 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 NDUFB3O43676 98 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 DUSP14O95147 198 aaKnown RBP2.94□□□□□ -1.94
CLHC1-201ENST00000401408 UBL3O95164 117 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 COX6B1P14854 86 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 CXCL5P42830 114 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 RPL23P62829 140 aaKnown RBP2.94□□□□□ -1.94
CLHC1-201ENST00000401408 Q0VG73 95 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 COPS9Q8WXC6 57 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 TMEM158Q8WZ71 300 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 H1FXQ92522 213 aaKnown RBP2.94□□□□□ -1.94
CLHC1-201ENST00000401408 AQP10Q96PS8 301 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 ZNF702PQ9H963 129 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 RYR3Q15413 4870 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 SPTBP11277 2137 aa2.94□□□□□ -1.94
CLHC1-201ENST00000401408 IGHV3-38A0A0C4DH36 116 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 K7EQG2 157 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 PRSS1P07477 247 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 CRYGAP11844 174 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HLA-DRB4P13762 266 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 IL3RAP26951 378 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 ZNF80P51504 273 aaPredicted RBP2.93□□□□□ -1.94
CLHC1-201ENST00000401408 ATP5G2Q06055 141 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 OR2T2Q6IF00 324 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 Q6ZS92 163 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 Q6ZSN1 163 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 TMEM61Q8N0U2 210 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 FDCSPQ8NFU4 85 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 OR10P1Q8NGE3 313 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 SMR3AQ99954 134 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HDHD3Q9BSH5 251 aaPredicted RBP2.93□□□□□ -1.94
CLHC1-201ENST00000401408 C16orf95Q9H693 158 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HLA-DRB4X5D2U9 266 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 ZNF705FA8MVS1 300 aaPredicted RBP2.93□□□□□ -1.94
CLHC1-201ENST00000401408 F8W1H4 67 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 TMEM256-PLSCR3K7ERE1 68 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 M0R2P5 195 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 ETV2O00321 342 aaPredicted RBP2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HIST1H2BKO60814 126 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 SFT2D2O95562 160 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 CFDP00746 253 aaPredicted RBP2.93□□□□□ -1.94
CLHC1-201ENST00000401408 SLC25A5P05141 298 aaKnown RBP2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HIST1H2BJP06899 126 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 PRSS2P07478 247 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 ZNF705BP0CI00 300 aaPredicted RBP2.93□□□□□ -1.94
CLHC1-201ENST00000401408 TPT1P13693 172 aaKnown RBP2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HIST1H2BOP23527 126 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HIST1H2BBP33778 126 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HINT1P49773 126 aaPredicted RBP2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HIST1H2BDP58876 126 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HIST1H2BCP62807 126 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HBBP68871 147 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HIST2H2BEQ16778 126 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.93□□□□□ -1.94
CLHC1-201ENST00000401408 C10orf111Q8N326 155 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 ATP6V0E2Q8NHE4 81 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HIST1H2BHQ93079 126 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HIST1H2BNQ99877 126 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 HIST1H2BMQ99879 126 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 FGFBP2Q9BYJ0 223 aa2.93□□□□□ -1.94
CLHC1-201ENST00000401408 F11RQ9Y624 299 aaKnown RBP2.93□□□□□ -1.94
CLHC1-201ENST00000401408 TRAV9-2A0A087WT02 112 aa2.92□□□□□ -1.94
CLHC1-201ENST00000401408 EPM2AB3EWF7 344 aa2.92□□□□□ -1.94
CLHC1-201ENST00000401408 NDUFC2-KCTD14E9PQ53 114 aa2.92□□□□□ -1.94
CLHC1-201ENST00000401408 PLA2G10O15496 165 aa2.92□□□□□ -1.94
CLHC1-201ENST00000401408 SYNGR2O43760 224 aa2.92□□□□□ -1.94
CLHC1-201ENST00000401408 ZNF253O75346 499 aa2.92□□□□□ -1.94
CLHC1-201ENST00000401408 SNCGO76070 127 aa2.92□□□□□ -1.94
CLHC1-201ENST00000401408 NDUFB6O95139 128 aa2.92□□□□□ -1.94
CLHC1-201ENST00000401408 IGHV3-43DP0DP04 118 aa2.92□□□□□ -1.94
CLHC1-201ENST00000401408 SLC25A6P12236 298 aa2.92□□□□□ -1.94
CLHC1-201ENST00000401408 SNRPD3P62318 126 aaKnown RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms