RNA–Protein interactions for RNA: ENST00000400353.6

LINC00649-202, long intergenic non-protein coding RNA 649, humanhuman

TSL 3

Gene LINC00649, Length 2,090 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-202ENST00000400353 PGLYRP4Q96LB8 373 aa8.38□□□□□ -1.07
LINC00649-202ENST00000400353 CENPEQ02224 2701 aa8.37□□□□□ -1.07
LINC00649-202ENST00000400353 HELZ2Q9BYK8 2649 aaKnown RBP8.37□□□□□ -1.07
LINC00649-202ENST00000400353 A0A087X0K7 114 aa8.37□□□□□ -1.07
LINC00649-202ENST00000400353 IGHV3-23P01764 117 aa8.37□□□□□ -1.07
LINC00649-202ENST00000400353 AMTP48728 403 aa8.37□□□□□ -1.07
LINC00649-202ENST00000400353 RIGQ13278 110 aa8.37□□□□□ -1.07
LINC00649-202ENST00000400353 COX8CQ7Z4L0 72 aa8.37□□□□□ -1.07
LINC00649-202ENST00000400353 NIT1Q86X76 327 aa8.37□□□□□ -1.07
LINC00649-202ENST00000400353 ZC2HC1AQ96GY0 325 aa8.37□□□□□ -1.07
LINC00649-202ENST00000400353 SIGMAR1Q99720 223 aa8.37□□□□□ -1.07
LINC00649-202ENST00000400353 CSMD2Q7Z408 3487 aa8.37□□□□□ -1.07
LINC00649-202ENST00000400353 CHEK1O14757 476 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 AZU1P20160 251 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 DSCR9P59020 149 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 TOMM20LQ6UXN7 152 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 TEX43Q6ZNM6 134 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 GATD1Q8NB37 220 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 ABCA4P78363 2273 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 FAM223BA6NKX1 122 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 GPR183P32249 361 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 RPL32P62910 135 aaKnown RBP8.36□□□□□ -1.07
LINC00649-202ENST00000400353 FAM223AQ8IWN6 122 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 BORCS7Q96B45 105 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 MRAP2Q96G30 205 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 NRN1Q9NPD7 142 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 ARHGAP32A7KAX9 2087 aa8.36□□□□□ -1.07
LINC00649-202ENST00000400353 IGHV4-61A0A0C4DH41 118 aa8.35□□□□□ -1.07
LINC00649-202ENST00000400353 PMCHP20382 165 aa8.35□□□□□ -1.07
LINC00649-202ENST00000400353 ATP5G2Q06055 141 aa8.35□□□□□ -1.07
LINC00649-202ENST00000400353 RCHY1Q96PM5 261 aa8.35□□□□□ -1.07
LINC00649-202ENST00000400353 SLC50A1Q9BRV3 221 aa8.35□□□□□ -1.07
LINC00649-202ENST00000400353 ZFAND3Q9H8U3 227 aa8.35□□□□□ -1.07
LINC00649-202ENST00000400353 TRAV41A0A0B4J266 112 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 A0A1B0GUT8 65 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 SH2D7A6NKC9 451 aaPredicted RBP8.34□□□□□ -1.07
LINC00649-202ENST00000400353 M0R3E3 92 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 HSBP1O75506 76 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 BCL6BQ8N143 479 aaPredicted RBP8.34□□□□□ -1.07
LINC00649-202ENST00000400353 OR1N2Q8NGR9 330 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 NDFIP1Q9BT67 221 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 SS18L2Q9UHA2 77 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 VPS13CQ709C8 3753 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 CELSR2Q9HCU4 2923 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 NBPF19A0A087WUL8 3843 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 ZNF785A8K8V0 405 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 H3BUA1 57 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 M0QXV9 152 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 SRSF2Q01130 221 aaKnown RBP8.34□□□□□ -1.07
LINC00649-202ENST00000400353 SRSF1Q07955 248 aaKnown RBP eCLIP8.34□□□□□ -1.07
LINC00649-202ENST00000400353 TDRG1Q3Y452 100 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 C19orf54Q5BKX5 351 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 CHCHD1Q96BP2 118 aaKnown RBP8.34□□□□□ -1.07
LINC00649-202ENST00000400353 SMAD5-AS1Q9Y6J3 95 aa8.34□□□□□ -1.07
LINC00649-202ENST00000400353 ASH1LQ9NR48 2969 aaKnown RBP8.34□□□□□ -1.07
LINC00649-202ENST00000400353 GCN1Q92616 2671 aaKnown RBP8.33□□□□□ -1.08
LINC00649-202ENST00000400353 GAGE12BA1L429 117 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 RBAKDNA6NC62 111 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 APOHP02749 345 aaPredicted RBP8.33□□□□□ -1.08
LINC00649-202ENST00000400353 KRTDAPP60985 99 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 CCDC140Q96MF4 163 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 METTL26Q96S19 204 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 LOC102724200A0A096LPH7 203 aaPredicted RBP8.33□□□□□ -1.08
LINC00649-202ENST00000400353 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.33□□□□□ -1.08
LINC00649-202ENST00000400353 TRAV40A0A0B4J280 105 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 TMEM189A5PLL7 270 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 G3V318 75 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 BUB3O43684 328 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 CLEC19AQ6UXS0 136 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 MRPL53Q96EL3 112 aaKnown RBP8.33□□□□□ -1.08
LINC00649-202ENST00000400353 VAMP8Q9BV40 100 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 TMEM160Q9NX00 188 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 LAMTOR2Q9Y2Q5 125 aa8.33□□□□□ -1.08
LINC00649-202ENST00000400353 USP9YO00507 2555 aaPredicted RBP8.32□□□□□ -1.08
LINC00649-202ENST00000400353 MSMBP08118 114 aa8.32□□□□□ -1.08
LINC00649-202ENST00000400353 GATA3P23771 443 aa8.32□□□□□ -1.08
LINC00649-202ENST00000400353 RNASEKQ6P5S7 137 aaKnown RBP8.32□□□□□ -1.08
LINC00649-202ENST00000400353 PIFOQ8TCI5 191 aa8.32□□□□□ -1.08
LINC00649-202ENST00000400353 C8orf49Q96NF6 230 aa8.32□□□□□ -1.08
LINC00649-202ENST00000400353 PRR25Q96S07 402 aa8.32□□□□□ -1.08
LINC00649-202ENST00000400353 CSMD1Q96PZ7 3565 aa8.32□□□□□ -1.08
LINC00649-202ENST00000400353 M0R2Z0 102 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 SH2D1AO60880 128 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 IGF1P05019 195 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 SMIM17P0DL12 118 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 NTF3P20783 257 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 CRIP1P50238 77 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 VAMP3Q15836 100 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 FER1L6-AS1Q8NA97 138 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 TSSC4Q9Y5U2 329 aaPredicted RBP8.31□□□□□ -1.08
LINC00649-202ENST00000400353 IGHV4-30-2A0A087WSY4 118 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 IGKV2-40A0A087WW87 121 aaPredicted RBP8.31□□□□□ -1.08
LINC00649-202ENST00000400353 A1L4Q6 167 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 A6NDX4 124 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 LINC01548A6NM66 108 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 IGKV2D-40P01614 121 aaPredicted RBP8.31□□□□□ -1.08
LINC00649-202ENST00000400353 SLC25A16P16260 332 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 PMCHL1Q16048 86 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 LCN12Q6JVE5 192 aa8.31□□□□□ -1.08
LINC00649-202ENST00000400353 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms