RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 Q6ZSR3 168 aa11.03□□□□□ -0.64
RUNX3-203ENST00000399916 C8orf46Q8TAG6 207 aa11.03□□□□□ -0.64
RUNX3-203ENST00000399916 PRADC1Q9BSG0 188 aa11.03□□□□□ -0.64
RUNX3-203ENST00000399916 FOXA2Q9Y261 457 aaPredicted RBP11.03□□□□□ -0.64
RUNX3-203ENST00000399916 ACACAQ13085 2346 aa11.03□□□□□ -0.64
RUNX3-203ENST00000399916 CCL8P80075 99 aa11.03□□□□□ -0.64
RUNX3-203ENST00000399916 PRCDQ00LT1 54 aa11.03□□□□□ -0.64
RUNX3-203ENST00000399916 LAGE3Q14657 143 aa11.03□□□□□ -0.64
RUNX3-203ENST00000399916 C5orf47Q569G3 176 aa11.03□□□□□ -0.64
RUNX3-203ENST00000399916 LRP4O75096 1905 aa11.03□□□□□ -0.64
RUNX3-203ENST00000399916 Q6P435 159 aa11.03□□□□□ -0.64
RUNX3-203ENST00000399916 TRAV26-2A0A0B4J265 109 aa11.02□□□□□ -0.64
RUNX3-203ENST00000399916 IGKV1-16P04430 117 aa11.02□□□□□ -0.64
RUNX3-203ENST00000399916 TNFAIP6P98066 277 aaPredicted RBP11.02□□□□□ -0.64
RUNX3-203ENST00000399916 DAZAP2Q15038 168 aaPredicted RBP11.02□□□□□ -0.64
RUNX3-203ENST00000399916 Q86TA4 180 aa11.02□□□□□ -0.64
RUNX3-203ENST00000399916 KLHL30-AS1Q8NEE0 82 aa11.02□□□□□ -0.64
RUNX3-203ENST00000399916 CITED2Q99967 270 aaPredicted RBP11.02□□□□□ -0.64
RUNX3-203ENST00000399916 PPDPFQ9H3Y8 114 aa11.02□□□□□ -0.64
RUNX3-203ENST00000399916 TRAV4A0A0B4J268 109 aa11.02□□□□□ -0.65
RUNX3-203ENST00000399916 MRPL20Q9BYC9 149 aaKnown RBP11.02□□□□□ -0.65
RUNX3-203ENST00000399916 PRRG2O14669 202 aa11.02□□□□□ -0.65
RUNX3-203ENST00000399916 DGAT2L7PQ6IED9 249 aa11.02□□□□□ -0.65
RUNX3-203ENST00000399916 FRYLO94915 3013 aa11.01□□□□□ -0.65
RUNX3-203ENST00000399916 H7C1H1 209 aa11.01□□□□□ -0.65
RUNX3-203ENST00000399916 ATXN8Q156A1 80 aa11.01□□□□□ -0.65
RUNX3-203ENST00000399916 C8orf49Q96NF6 230 aa11.01□□□□□ -0.65
RUNX3-203ENST00000399916 PKIGQ9Y2B9 76 aa11.01□□□□□ -0.65
RUNX3-203ENST00000399916 DKK1O94907 266 aa11.01□□□□□ -0.65
RUNX3-203ENST00000399916 C6orf15Q6UXA7 325 aaPredicted RBP11.01□□□□□ -0.65
RUNX3-203ENST00000399916 E9PLD3 99 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11□□□□□ -0.65
RUNX3-203ENST00000399916 PLNP26678 52 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 TMEM75Q8N9X5 138 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 ITLN1Q8WWA0 313 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 KMT2EQ8IZD2 1858 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 NDUFB3O43676 98 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 PRR20EP86478 221 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 PRR20CP86479 221 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 PRR20DP86480 221 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 PRR20BP86481 221 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 PRR20AP86496 221 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 SRSF2Q01130 221 aaKnown RBP11□□□□□ -0.65
RUNX3-203ENST00000399916 COLCA1Q6ZS62 124 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 TRPT1Q86TN4 253 aaKnown RBP11□□□□□ -0.65
RUNX3-203ENST00000399916 FAM57AQ8TBR7 257 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 DUX3Q96PT4 197 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 RAB1BQ9H0U4 201 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 SH2D1AO60880 128 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 FRYQ5TBA9 3013 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 HAX1O00165 279 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 CEACAM4O75871 244 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 NAV3Q8IVL0 2385 aa11□□□□□ -0.65
RUNX3-203ENST00000399916 PIEZO1Q92508 2521 aa10.99□□□□□ -0.65
RUNX3-203ENST00000399916 IGLV2-14P01704 120 aa10.99□□□□□ -0.65
RUNX3-203ENST00000399916 LINC00322Q6ZN03 302 aaPredicted RBP10.99□□□□□ -0.65
RUNX3-203ENST00000399916 ZNF625Q96I27 306 aaPredicted RBP10.99□□□□□ -0.65
RUNX3-203ENST00000399916 PRO1854Q9UHT4 67 aa10.99□□□□□ -0.65
RUNX3-203ENST00000399916 IGLV2-8P01709 118 aa10.98□□□□□ -0.65
RUNX3-203ENST00000399916 FAM216BQ8N7L0 139 aa10.98□□□□□ -0.65
RUNX3-203ENST00000399916 IGF2BP2-AS1Q96M15 143 aa10.98□□□□□ -0.65
RUNX3-203ENST00000399916 TTTY12Q9BZ98 90 aa10.98□□□□□ -0.65
RUNX3-203ENST00000399916 TMEM133Q9H2Q1 129 aa10.98□□□□□ -0.65
RUNX3-203ENST00000399916 J3KT08 172 aa10.98□□□□□ -0.65
RUNX3-203ENST00000399916 Q0VFX4 171 aa10.98□□□□□ -0.65
RUNX3-203ENST00000399916 DDB2Q92466 427 aa10.98□□□□□ -0.65
RUNX3-203ENST00000399916 TRAV13-1A0A0B4J241 112 aa10.98□□□□□ -0.65
RUNX3-203ENST00000399916 TRAV41A0A0B4J266 112 aa10.98□□□□□ -0.65
RUNX3-203ENST00000399916 DNAL4O96015 105 aa10.97□□□□□ -0.65
RUNX3-203ENST00000399916 TRACP01848 142 aa10.97□□□□□ -0.65
RUNX3-203ENST00000399916 RNASE2P10153 161 aaKnown RBP10.97□□□□□ -0.65
RUNX3-203ENST00000399916 MSRB1Q9NZV6 116 aa10.97□□□□□ -0.65
RUNX3-203ENST00000399916 ATG2AQ2TAZ0 1938 aa10.97□□□□□ -0.65
RUNX3-203ENST00000399916 TRGV5A0A0B4J1U4 118 aa10.97□□□□□ -0.65
RUNX3-203ENST00000399916 CCL11P51671 97 aa10.97□□□□□ -0.65
RUNX3-203ENST00000399916 CD7P09564 240 aa10.97□□□□□ -0.65
RUNX3-203ENST00000399916 GFRA4Q9GZZ7 299 aa10.97□□□□□ -0.65
RUNX3-203ENST00000399916 M0R2P5 195 aa10.96□□□□□ -0.65
RUNX3-203ENST00000399916 CCL3L1P16619 93 aa10.96□□□□□ -0.65
RUNX3-203ENST00000399916 ZNF492Q9P255 531 aa10.96□□□□□ -0.65
RUNX3-203ENST00000399916 IL17RELQ6ZVW7 336 aa10.96□□□□□ -0.65
RUNX3-203ENST00000399916 FAM110AQ9BQ89 295 aa10.96□□□□□ -0.65
RUNX3-203ENST00000399916 RNF7Q9UBF6 113 aa10.96□□□□□ -0.65
RUNX3-203ENST00000399916 TRBV6-6A0A0A6YYG2 114 aa10.96□□□□□ -0.66
RUNX3-203ENST00000399916 LOC107984640A0A0U1RRK4 108 aa10.96□□□□□ -0.66
RUNX3-203ENST00000399916 WDR86Q86TI4 376 aa10.96□□□□□ -0.66
RUNX3-203ENST00000399916 SPXQ9BT56 116 aa10.96□□□□□ -0.66
RUNX3-203ENST00000399916 NBEAQ8NFP9 2946 aa10.96□□□□□ -0.66
RUNX3-203ENST00000399916 TRGV8A0A0C4DH27 118 aa10.95□□□□□ -0.66
RUNX3-203ENST00000399916 CDX4O14627 284 aaPredicted RBP10.95□□□□□ -0.66
RUNX3-203ENST00000399916 FXYD5Q96DB9 178 aa10.95□□□□□ -0.66
RUNX3-203ENST00000399916 SLC25A39Q9BZJ4 359 aaPredicted RBP10.95□□□□□ -0.66
RUNX3-203ENST00000399916 TMEM126AQ9H061 195 aa10.95□□□□□ -0.66
RUNX3-203ENST00000399916 IGKV1OR2-108A0A075B7D4 117 aa10.95□□□□□ -0.66
RUNX3-203ENST00000399916 NPFFO15130 113 aa10.95□□□□□ -0.66
RUNX3-203ENST00000399916 SPRY2O43597 315 aa10.95□□□□□ -0.66
RUNX3-203ENST00000399916 TCL1BO95988 128 aa10.95□□□□□ -0.66
RUNX3-203ENST00000399916 SPANXA1Q9NS26 97 aa10.95□□□□□ -0.66
RUNX3-203ENST00000399916 OTOGLQ3ZCN5 2332 aa10.95□□□□□ -0.66
RUNX3-203ENST00000399916 ARHGAP32A7KAX9 2087 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms