RNA–Protein interactions for RNA: ENST00000399637.5

CACNA1C-215, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-215ENST00000399637 Q86TA4 180 aa8.9□□□□□ -0.98
CACNA1C-215ENST00000399637 IGKV1-5P01602 117 aa8.9□□□□□ -0.98
CACNA1C-215ENST00000399637 RTTNQ86VV8 2226 aa8.9□□□□□ -0.98
CACNA1C-215ENST00000399637 CHD5Q8TDI0 1954 aa8.9□□□□□ -0.98
CACNA1C-215ENST00000399637 IGKV1-27A0A075B6S5 117 aa8.9□□□□□ -0.98
CACNA1C-215ENST00000399637 SYS1-DBNDD2H3BUS1 97 aa8.9□□□□□ -0.98
CACNA1C-215ENST00000399637 ANKRD29Q8N6D5 301 aa8.9□□□□□ -0.98
CACNA1C-215ENST00000399637 AHCTF1Q8WYP5 2266 aa8.9□□□□□ -0.99
CACNA1C-215ENST00000399637 NDUFS6O75380 124 aaKnown RBP8.9□□□□□ -0.99
CACNA1C-215ENST00000399637 DEFB112Q30KQ8 113 aa8.9□□□□□ -0.99
CACNA1C-215ENST00000399637 RNASE13Q5GAN3 156 aaKnown RBP8.9□□□□□ -0.99
CACNA1C-215ENST00000399637 DUX4L9Q6RFH8 374 aaPredicted RBP8.9□□□□□ -0.99
CACNA1C-215ENST00000399637 ABCA4P78363 2273 aa8.9□□□□□ -0.99
CACNA1C-215ENST00000399637 A8MWP6 167 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 IGHG2P01859 326 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 CASC2Q6XLA1 102 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 AMN1Q8IY45 258 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 SHANK2-AS3Q9BTD1 123 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 TP53TG1Q9Y2A0 90 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 MAP1BP46821 2468 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 IGHV3-30P01768 117 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 IGHV3-33P01772 117 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 IGHV3-30-3P0DP02 117 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 IGHV3-30-5P0DP03 117 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 TMEM243Q9BU79 118 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 SPTBP11277 2137 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 A0A087WV48 116 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 NMSQ5H8A3 153 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 MRPL27Q9P0M9 148 aaKnown RBP8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 UBE2AP49459 152 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 LINC01551Q86U37 167 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 RNF138Q8WVD3 245 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 A0A0U1RQV1 116 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 IGKV4-1P06312 121 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 NTF4P34130 210 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 PYY3Q5JQD4 70 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 SRCAPQ6ZRS2 3230 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 ARHGEF17Q96PE2 2063 aaPredicted RBP8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 IGKV1-39P01597 117 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 IGKV1D-39P04432 117 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 ARMS2P0C7Q2 107 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 HGFACQ04756 655 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 C8orf49Q96NF6 230 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 SMAD5-AS1Q9Y6J3 95 aa8.89□□□□□ -0.99
CACNA1C-215ENST00000399637 SBF1O95248 1867 aa8.88□□□□□ -0.99
CACNA1C-215ENST00000399637 MYOFQ9NZM1 2061 aa8.88□□□□□ -0.99
CACNA1C-215ENST00000399637 CFHR2P36980 270 aa8.88□□□□□ -0.99
CACNA1C-215ENST00000399637 C8orf86Q6ZUL3 223 aa8.88□□□□□ -0.99
CACNA1C-215ENST00000399637 MESP1Q9BRJ9 268 aa8.88□□□□□ -0.99
CACNA1C-215ENST00000399637 Q6P435 159 aa8.88□□□□□ -0.99
CACNA1C-215ENST00000399637 DEFB136Q30KP8 78 aa8.88□□□□□ -0.99
CACNA1C-215ENST00000399637 FNDC10F2Z333 226 aa8.88□□□□□ -0.99
CACNA1C-215ENST00000399637 PDE6HQ13956 83 aa8.88□□□□□ -0.99
CACNA1C-215ENST00000399637 UBL5Q9BZL1 73 aa8.88□□□□□ -0.99
CACNA1C-215ENST00000399637 ADAMTSL5Q6ZMM2 481 aa8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 IGKV1D-17A0A075B6S4 117 aa8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 IFITM1P13164 125 aa8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 MRPL23Q16540 153 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 LINC00473A8K010 186 aa8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 RNASE2P10153 161 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 TMEM14EPQ6UXP3 125 aa8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 C1orf194Q5T5A4 169 aa8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 TRIOBPQ9H2D6 2365 aa8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 BRCA1P38398 1863 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 TRBV6-6A0A0A6YYG2 114 aa8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 ZC2HC1BQ5TFG8 222 aa8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 NOP10Q9NPE3 64 aaKnown RBP8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 VPREB3Q9UKI3 123 aa8.87□□□□□ -0.99
CACNA1C-215ENST00000399637 H0Y9J4 135 aa8.86□□□□□ -0.99
CACNA1C-215ENST00000399637 ZNRF2Q8NHG8 242 aa8.86□□□□□ -0.99
CACNA1C-215ENST00000399637 RNF144BQ7Z419 303 aa8.86□□□□□ -0.99
CACNA1C-215ENST00000399637 IGHV1OR15-1A0A075B7D0 117 aa8.86□□□□□ -0.99
CACNA1C-215ENST00000399637 NDUFB8O95169 186 aa8.86□□□□□ -0.99
CACNA1C-215ENST00000399637 C3orf79P0CE67 100 aa8.86□□□□□ -0.99
CACNA1C-215ENST00000399637 VOPP1Q96AW1 172 aa8.86□□□□□ -0.99
CACNA1C-215ENST00000399637 G3V318 75 aa8.86□□□□□ -0.99
CACNA1C-215ENST00000399637 DLEU1O43261 78 aa8.86□□□□□ -0.99
CACNA1C-215ENST00000399637 HS3ST6Q96QI5 342 aa8.86□□□□□ -0.99
CACNA1C-215ENST00000399637 PRSS46E5RG02 174 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 ICOSQ9Y6W8 199 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 ESPL1Q14674 2120 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 IGHV4-30-4P0DP06 118 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 IGHV4-31P0DP07 118 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 UTF1Q5T230 341 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 GTSF1Q8WW33 167 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 ESM1Q9NQ30 184 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 PLXNA3P51805 1871 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 IGHV4-30-2A0A087WSY4 118 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 PFN1P07737 140 aaKnown RBP8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 Q8N8P6 123 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 SPART-AS1P0CW21 52 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 BUB3O43684 328 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 SLAQ13239 276 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 PNRC2Q9NPJ4 139 aaKnown RBP8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 SCN10AQ9Y5Y9 1956 aa8.85□□□□□ -0.99
CACNA1C-215ENST00000399637 SHISA9B4DS77 424 aa8.84□□□□□ -0.99
CACNA1C-215ENST00000399637 LYPD6BQ8NI32 183 aa8.84□□□□□ -0.99
CACNA1C-215ENST00000399637 U3KQE9 123 aa8.84□□□□□ -0.99
CACNA1C-215ENST00000399637 C15orf62A8K5M9 175 aa8.84□□□□□ -0.99
CACNA1C-215ENST00000399637 PRSS57Q6UWY2 283 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms