RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 CRISP2P16562 243 aa11.91□□□□□ -0.5
UFD1-202ENST00000399523 OR10G4Q8NGN3 311 aa11.91□□□□□ -0.5
UFD1-202ENST00000399523 BLNKQ8WV28 456 aa11.91□□□□□ -0.5
UFD1-202ENST00000399523 MRPL53Q96EL3 112 aaKnown RBP11.91□□□□□ -0.5
UFD1-202ENST00000399523 LINC00477Q96M19 166 aa11.91□□□□□ -0.5
UFD1-202ENST00000399523 CHAC1Q9BUX1 264 aa11.91□□□□□ -0.5
UFD1-202ENST00000399523 IGHV1OR15-1A0A075B7D0 117 aa11.9□□□□□ -0.5
UFD1-202ENST00000399523 C9JCJ5 164 aa11.9□□□□□ -0.5
UFD1-202ENST00000399523 GOSR2O14653 212 aa11.9□□□□□ -0.5
UFD1-202ENST00000399523 GPX1P07203 203 aa11.9□□□□□ -0.5
UFD1-202ENST00000399523 RRAS2P62070 204 aaPredicted RBP11.9□□□□□ -0.5
UFD1-202ENST00000399523 ID3Q02535 119 aa11.9□□□□□ -0.5
UFD1-202ENST00000399523 TDRG1Q3Y452 100 aa11.9□□□□□ -0.5
UFD1-202ENST00000399523 SH2D6Q7Z4S9 175 aa11.9□□□□□ -0.5
UFD1-202ENST00000399523 ZNF546Q86UE3 836 aa11.9□□□□□ -0.5
UFD1-202ENST00000399523 AGPAT4-IT1Q9H0P7 198 aa11.9□□□□□ -0.5
UFD1-202ENST00000399523 MCUBQ9NWR8 336 aa11.9□□□□□ -0.5
UFD1-202ENST00000399523 BOLA1Q9Y3E2 137 aa11.9□□□□□ -0.5
UFD1-202ENST00000399523 COX7A2P2O60397 106 aa11.89□□□□□ -0.51
UFD1-202ENST00000399523 ZNF253O75346 499 aa11.89□□□□□ -0.51
UFD1-202ENST00000399523 CCNKO75909 580 aa11.89□□□□□ -0.51
UFD1-202ENST00000399523 Q6ZQT7 251 aa11.89□□□□□ -0.51
UFD1-202ENST00000399523 ARPC5LQ9BPX5 153 aa11.89□□□□□ -0.51
UFD1-202ENST00000399523 TM2D2Q9BX73 214 aa11.89□□□□□ -0.51
UFD1-202ENST00000399523 PSENENQ9NZ42 101 aa11.89□□□□□ -0.51
UFD1-202ENST00000399523 M0R3E3 92 aa11.88□□□□□ -0.51
UFD1-202ENST00000399523 AGPAT2O15120 278 aa11.88□□□□□ -0.51
UFD1-202ENST00000399523 POLR2GP62487 172 aaKnown RBP eCLIP11.88□□□□□ -0.51
UFD1-202ENST00000399523 ASAH1Q13510 395 aa11.88□□□□□ -0.51
UFD1-202ENST00000399523 CTF1Q16619 201 aa11.88□□□□□ -0.51
UFD1-202ENST00000399523 ZFAND2AQ8N6M9 145 aa11.88□□□□□ -0.51
UFD1-202ENST00000399523 OR10P1Q8NGE3 313 aa11.88□□□□□ -0.51
UFD1-202ENST00000399523 RASL10AQ92737 203 aa11.88□□□□□ -0.51
UFD1-202ENST00000399523 SLC25A31Q9H0C2 315 aa11.88□□□□□ -0.51
UFD1-202ENST00000399523 CTDSP2O14595 271 aa11.87□□□□□ -0.51
UFD1-202ENST00000399523 RS1O15537 224 aa11.87□□□□□ -0.51
UFD1-202ENST00000399523 RGS5O15539 181 aa11.87□□□□□ -0.51
UFD1-202ENST00000399523 ATP6V1G2O95670 118 aa11.87□□□□□ -0.51
UFD1-202ENST00000399523 HOXB5P09067 269 aa11.87□□□□□ -0.51
UFD1-202ENST00000399523 VAMP1P23763 118 aa11.87□□□□□ -0.51
UFD1-202ENST00000399523 LAGE3Q14657 143 aa11.87□□□□□ -0.51
UFD1-202ENST00000399523 LINC01620Q4KN68 170 aa11.87□□□□□ -0.51
UFD1-202ENST00000399523 PRR9Q5T870 116 aa11.87□□□□□ -0.51
UFD1-202ENST00000399523 C10orf113Q5VZT2 155 aa11.87□□□□□ -0.51
UFD1-202ENST00000399523 TMEM14EPQ6UXP3 125 aa11.87□□□□□ -0.51
UFD1-202ENST00000399523 CIRBP-AS1Q8TBR5 109 aa11.87□□□□□ -0.51
UFD1-202ENST00000399523 CCDC59Q9P031 241 aaKnown RBP11.87□□□□□ -0.51
UFD1-202ENST00000399523 RABL2AQ9UBK7 228 aaPredicted RBP11.87□□□□□ -0.51
UFD1-202ENST00000399523 LOC100131303A0A0U1RQF7 123 aa11.86□□□□□ -0.51
UFD1-202ENST00000399523 C9orf47Q6ZRZ4 202 aa11.86□□□□□ -0.51
UFD1-202ENST00000399523 SMIM8Q96KF7 97 aa11.86□□□□□ -0.51
UFD1-202ENST00000399523 MGAT4CQ9UBM8 478 aa11.86□□□□□ -0.51
UFD1-202ENST00000399523 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.85□□□□□ -0.51
UFD1-202ENST00000399523 TRAV8-6A0A0B4J262 113 aa11.85□□□□□ -0.51
UFD1-202ENST00000399523 SFT2D2O95562 160 aa11.85□□□□□ -0.51
UFD1-202ENST00000399523 IGLV2-8P01709 118 aa11.85□□□□□ -0.51
UFD1-202ENST00000399523 METTL15P1P0C7V9 234 aa11.85□□□□□ -0.51
UFD1-202ENST00000399523 MT1HL1P0DM35 61 aa11.85□□□□□ -0.51
UFD1-202ENST00000399523 TNFSF8P32971 234 aa11.85□□□□□ -0.51
UFD1-202ENST00000399523 PPT1P50897 306 aa11.85□□□□□ -0.51
UFD1-202ENST00000399523 IL18Q14116 193 aa11.85□□□□□ -0.51
UFD1-202ENST00000399523 ZNF846Q147U1 533 aa11.85□□□□□ -0.51
UFD1-202ENST00000399523 NAA50Q9GZZ1 169 aaKnown RBP11.85□□□□□ -0.51
UFD1-202ENST00000399523 DNAJC4Q9NNZ3 241 aa11.85□□□□□ -0.51
UFD1-202ENST00000399523 PRELID1Q9Y255 219 aa11.85□□□□□ -0.51
UFD1-202ENST00000399523 TRBV19A0A075B6N1 114 aa11.84□□□□□ -0.51
UFD1-202ENST00000399523 LECT2O14960 151 aa11.84□□□□□ -0.51
UFD1-202ENST00000399523 ACOT6Q3I5F7 207 aaPredicted RBP11.84□□□□□ -0.51
UFD1-202ENST00000399523 SRRQ9GZT4 340 aa11.84□□□□□ -0.51
UFD1-202ENST00000399523 TRAV4A0A0B4J268 109 aa11.83□□□□□ -0.52
UFD1-202ENST00000399523 SSSCA1O60232 199 aa11.83□□□□□ -0.52
UFD1-202ENST00000399523 NDUFB4O95168 129 aa11.83□□□□□ -0.52
UFD1-202ENST00000399523 IGHV3-30P01768 117 aa11.83□□□□□ -0.52
UFD1-202ENST00000399523 IGHV3-33P01772 117 aa11.83□□□□□ -0.52
UFD1-202ENST00000399523 IGHV3-30-3P0DP02 117 aa11.83□□□□□ -0.52
UFD1-202ENST00000399523 IGHV3-30-5P0DP03 117 aa11.83□□□□□ -0.52
UFD1-202ENST00000399523 NHLRC2Q8NBF2 726 aa11.83□□□□□ -0.52
UFD1-202ENST00000399523 DIRAS2Q96HU8 199 aa11.83□□□□□ -0.52
UFD1-202ENST00000399523 MGST2Q99735 147 aa11.83□□□□□ -0.52
UFD1-202ENST00000399523 SPXQ9BT56 116 aa11.83□□□□□ -0.52
UFD1-202ENST00000399523 TNXBP22105 4242 aa11.83□□□□□ -0.52
UFD1-202ENST00000399523 HNRNPA3P51991 378 aaKnown RBP11.82□□□□□ -0.52
UFD1-202ENST00000399523 PPP1R1AQ13522 171 aa11.82□□□□□ -0.52
UFD1-202ENST00000399523 OR10J3Q5JRS4 329 aa11.82□□□□□ -0.52
UFD1-202ENST00000399523 GGACTQ9BVM4 153 aa11.82□□□□□ -0.52
UFD1-202ENST00000399523 ARL16Q0P5N6 197 aa11.81□□□□□ -0.52
UFD1-202ENST00000399523 TMEM78Q5T7P6 136 aa11.81□□□□□ -0.52
UFD1-202ENST00000399523 RAB2BQ8WUD1 216 aa11.81□□□□□ -0.52
UFD1-202ENST00000399523 DAZAP1Q96EP5 407 aaKnown RBP11.81□□□□□ -0.52
UFD1-202ENST00000399523 ZNF492Q9P255 531 aa11.81□□□□□ -0.52
UFD1-202ENST00000399523 PFN1P07737 140 aaKnown RBP11.8□□□□□ -0.52
UFD1-202ENST00000399523 HIST1H1EP10412 219 aaKnown RBP11.8□□□□□ -0.52
UFD1-202ENST00000399523 PDE6HQ13956 83 aa11.8□□□□□ -0.52
UFD1-202ENST00000399523 Q6ZRG5 221 aa11.8□□□□□ -0.52
UFD1-202ENST00000399523 OR4C5Q8NGB2 326 aa11.8□□□□□ -0.52
UFD1-202ENST00000399523 IGKV2-40A0A087WW87 121 aaPredicted RBP11.79□□□□□ -0.52
UFD1-202ENST00000399523 TRBV7-9A0A0J9YWB2 115 aa11.79□□□□□ -0.52
UFD1-202ENST00000399523 RBFOX3A6NFN3 312 aa11.79□□□□□ -0.52
UFD1-202ENST00000399523 TSC22D2O75157 780 aa11.79□□□□□ -0.52
UFD1-202ENST00000399523 IGKV2D-40P01614 121 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms