RNA–Protein interactions for RNA: ENST00000399353.5

ITSN1-210, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 3,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-210ENST00000399353 SRRM5B3KS81 715 aa11.81□□□□□ -0.52
ITSN1-210ENST00000399353 RUSC1-AS1Q66K80 236 aa11.81□□□□□ -0.52
ITSN1-210ENST00000399353 PIP4P2Q8N4L2 257 aa11.81□□□□□ -0.52
ITSN1-210ENST00000399353 ZNF562Q6V9R5 426 aa11.8□□□□□ -0.52
ITSN1-210ENST00000399353 A6NJY4 79 aa11.8□□□□□ -0.52
ITSN1-210ENST00000399353 ZFHX2Q9C0A1 2572 aaPredicted RBP11.8□□□□□ -0.52
ITSN1-210ENST00000399353 TNFRSF6BO95407 300 aa11.8□□□□□ -0.52
ITSN1-210ENST00000399353 NGBQ9NPG2 151 aa11.8□□□□□ -0.52
ITSN1-210ENST00000399353 KLF12Q9Y4X4 402 aa11.8□□□□□ -0.52
ITSN1-210ENST00000399353 FAM27E3Q08E93 113 aa11.8□□□□□ -0.52
ITSN1-210ENST00000399353 ODF1Q14990 250 aa11.8□□□□□ -0.52
ITSN1-210ENST00000399353 FAM90A1Q86YD7 464 aa11.79□□□□□ -0.52
ITSN1-210ENST00000399353 COLQQ9Y215 455 aaPredicted RBP11.79□□□□□ -0.52
ITSN1-210ENST00000399353 IGHV1-18A0A0C4DH31 117 aa11.79□□□□□ -0.52
ITSN1-210ENST00000399353 TRBV7-9A0A0J9YWB2 115 aa11.79□□□□□ -0.52
ITSN1-210ENST00000399353 SPANXN1Q5VSR9 72 aa11.79□□□□□ -0.52
ITSN1-210ENST00000399353 IGKV1D-37A0A075B6S9 117 aa11.79□□□□□ -0.52
ITSN1-210ENST00000399353 ZNF785A8K8V0 405 aa11.79□□□□□ -0.52
ITSN1-210ENST00000399353 C9JAW5 83 aa11.79□□□□□ -0.52
ITSN1-210ENST00000399353 ATP5IP56385 69 aaPredicted RBP11.79□□□□□ -0.52
ITSN1-210ENST00000399353 FBXL15Q9H469 300 aa11.79□□□□□ -0.52
ITSN1-210ENST00000399353 GAGE12JA6NER3 117 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 GAGE7O76087 117 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 IGHV4-39P01824 125 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 GAGE12FP0CL80 117 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 GAGE12GP0CL81 117 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 GAGE12IP0CL82 117 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 RPL11P62913 178 aaKnown RBP11.78□□□□□ -0.52
ITSN1-210ENST00000399353 GAGE4Q13068 117 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 TMEM155Q4W5P6 130 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 PPDPFLQ8WWR9 84 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 SPRY2O43597 315 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 ATP5LO75964 103 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 DEFB124Q8NES8 71 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 KLRD1Q13241 179 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 LYRM7Q5U5X0 104 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 Q6AWC8 147 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 SCGB3A1Q96QR1 104 aa11.78□□□□□ -0.52
ITSN1-210ENST00000399353 IGHV3-66A0A0C4DH42 116 aa11.77□□□□□ -0.52
ITSN1-210ENST00000399353 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.77□□□□□ -0.52
ITSN1-210ENST00000399353 ERG28Q9UKR5 140 aa11.77□□□□□ -0.52
ITSN1-210ENST00000399353 CNTFRP26992 372 aa11.77□□□□□ -0.53
ITSN1-210ENST00000399353 C2CD3Q4AC94 2353 aa11.77□□□□□ -0.53
ITSN1-210ENST00000399353 LRP4O75096 1905 aa11.77□□□□□ -0.53
ITSN1-210ENST00000399353 GP9P14770 177 aa11.77□□□□□ -0.53
ITSN1-210ENST00000399353 SRSF6Q13247 344 aaKnown RBP11.77□□□□□ -0.53
ITSN1-210ENST00000399353 IGHV3-49A0A0A0MS15 119 aa11.76□□□□□ -0.53
ITSN1-210ENST00000399353 C16orf97H3BN30 126 aa11.76□□□□□ -0.53
ITSN1-210ENST00000399353 KLHL30-AS1Q8NEE0 82 aa11.76□□□□□ -0.53
ITSN1-210ENST00000399353 RITA1Q96K30 269 aa11.76□□□□□ -0.53
ITSN1-210ENST00000399353 ADAMTS20P59510 1910 aa11.76□□□□□ -0.53
ITSN1-210ENST00000399353 LINC01548A6NM66 108 aa11.76□□□□□ -0.53
ITSN1-210ENST00000399353 MGPP08493 103 aa11.76□□□□□ -0.53
ITSN1-210ENST00000399353 NFE4Q86UQ8 179 aa11.76□□□□□ -0.53
ITSN1-210ENST00000399353 NXT2Q9NPJ8 142 aaKnown RBP11.76□□□□□ -0.53
ITSN1-210ENST00000399353 CRIP1P50238 77 aa11.75□□□□□ -0.53
ITSN1-210ENST00000399353 TMEM78Q5T7P6 136 aa11.75□□□□□ -0.53
ITSN1-210ENST00000399353 IGKV3-7A0A075B6H7 116 aa11.75□□□□□ -0.53
ITSN1-210ENST00000399353 CCDC179H3BU77 68 aa11.75□□□□□ -0.53
ITSN1-210ENST00000399353 S100A4P26447 101 aaKnown RBP11.75□□□□□ -0.53
ITSN1-210ENST00000399353 CR1LQ2VPA4 569 aa11.75□□□□□ -0.53
ITSN1-210ENST00000399353 SLC25A16P16260 332 aa11.74□□□□□ -0.53
ITSN1-210ENST00000399353 ZNF688P0C7X2 276 aa11.74□□□□□ -0.53
ITSN1-210ENST00000399353 EGR2P11161 476 aaPredicted RBP11.74□□□□□ -0.53
ITSN1-210ENST00000399353 GLRXP35754 106 aa11.74□□□□□ -0.53
ITSN1-210ENST00000399353 NCKAP5O14513 1909 aa11.74□□□□□ -0.53
ITSN1-210ENST00000399353 ARHGAP32A7KAX9 2087 aa11.74□□□□□ -0.53
ITSN1-210ENST00000399353 TMEM170BQ5T4T1 132 aa11.74□□□□□ -0.53
ITSN1-210ENST00000399353 TM2D2Q9BX73 214 aa11.74□□□□□ -0.53
ITSN1-210ENST00000399353 CDIP1Q9H305 208 aa11.74□□□□□ -0.53
ITSN1-210ENST00000399353 PRSS2P07478 247 aa11.73□□□□□ -0.53
ITSN1-210ENST00000399353 HLA-DMBP28068 263 aa11.73□□□□□ -0.53
ITSN1-210ENST00000399353 HIGD1BQ9P298 99 aa11.73□□□□□ -0.53
ITSN1-210ENST00000399353 IGHV3-64A0A075B6Q5 118 aa11.73□□□□□ -0.53
ITSN1-210ENST00000399353 M0R381 172 aa11.73□□□□□ -0.53
ITSN1-210ENST00000399353 MYCNOSP40205 109 aa11.73□□□□□ -0.53
ITSN1-210ENST00000399353 ZNF71Q9NQZ8 489 aaPredicted RBP11.73□□□□□ -0.53
ITSN1-210ENST00000399353 DEFB123Q8N688 67 aa11.73□□□□□ -0.53
ITSN1-210ENST00000399353 TRGV9Q99603 122 aa11.73□□□□□ -0.53
ITSN1-210ENST00000399353 MEIG1Q5JSS6 88 aa11.72□□□□□ -0.53
ITSN1-210ENST00000399353 HHLA3Q9XRX5 114 aa11.72□□□□□ -0.53
ITSN1-210ENST00000399353 TRBV19A0A075B6N1 114 aa11.72□□□□□ -0.53
ITSN1-210ENST00000399353 TMEM262E9PQX1 116 aa11.72□□□□□ -0.53
ITSN1-210ENST00000399353 WISP2O76076 250 aa11.72□□□□□ -0.53
ITSN1-210ENST00000399353 TMEM167AQ8TBQ9 72 aa11.72□□□□□ -0.53
ITSN1-210ENST00000399353 MYMXA0A1B0GTQ4 84 aa11.72□□□□□ -0.53
ITSN1-210ENST00000399353 ANKRD29Q8N6D5 301 aa11.72□□□□□ -0.53
ITSN1-210ENST00000399353 IGFBPL1Q8WX77 278 aa11.72□□□□□ -0.53
ITSN1-210ENST00000399353 RNF125Q96EQ8 232 aa11.72□□□□□ -0.53
ITSN1-210ENST00000399353 ERCC8Q13216 396 aa11.71□□□□□ -0.53
ITSN1-210ENST00000399353 C5orf64Q2M2E5 130 aa11.71□□□□□ -0.53
ITSN1-210ENST00000399353 FAM159AQ6UWV7 190 aa11.71□□□□□ -0.53
ITSN1-210ENST00000399353 PRADC1Q9BSG0 188 aa11.71□□□□□ -0.53
ITSN1-210ENST00000399353 WI2-2373I1.2A0A1W2PRP0 233 aa11.71□□□□□ -0.53
ITSN1-210ENST00000399353 LAGE3Q14657 143 aa11.71□□□□□ -0.53
ITSN1-210ENST00000399353 PHLDA1Q8WV24 401 aaPredicted RBP11.71□□□□□ -0.53
ITSN1-210ENST00000399353 RPL32P62910 135 aaKnown RBP11.71□□□□□ -0.54
ITSN1-210ENST00000399353 POU2AF1Q16633 256 aa11.71□□□□□ -0.54
ITSN1-210ENST00000399353 TEN1Q86WV5 123 aa11.71□□□□□ -0.54
ITSN1-210ENST00000399353 LINC00312Q9Y6C7 94 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms