RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 XGP55808 180 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 CACNG7P62955 275 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 KLF17Q5JT82 389 aaPredicted RBP3.99□□□□□ -1.77
SSR1-202ENST00000397511 TEX29Q8N6K0 151 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 OSR1Q8TAX0 266 aaPredicted RBP3.99□□□□□ -1.77
SSR1-202ENST00000397511 DAZAP1Q96EP5 407 aaKnown RBP3.99□□□□□ -1.77
SSR1-202ENST00000397511 ZNF414Q96IQ9 312 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 FAM167A-AS1Q96KT0 104 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 C18orf15Q96N68 181 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 CHAC1Q9BUX1 264 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 TPPP3Q9BW30 176 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 GFRA4Q9GZZ7 299 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 FBXL15Q9H469 300 aa3.99□□□□□ -1.77
SSR1-202ENST00000397511 FNDC10F2Z333 226 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 DLL1O00548 723 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 TNFRSF13BO14836 293 aaPredicted RBP3.98□□□□□ -1.77
SSR1-202ENST00000397511 RBP4P02753 201 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 ATP5IP56385 69 aaPredicted RBP3.98□□□□□ -1.77
SSR1-202ENST00000397511 LYZP61626 148 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 C2orf83Q53S99 150 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 ZNF833PQ6ZTB9 187 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.98□□□□□ -1.77
SSR1-202ENST00000397511 RNASE6Q93091 150 aaKnown RBP3.98□□□□□ -1.77
SSR1-202ENST00000397511 TM2D2Q9BX73 214 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 MRPL32Q9BYC8 188 aaKnown RBP3.98□□□□□ -1.77
SSR1-202ENST00000397511 RAB9BQ9NP90 201 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 IGHV3-35A0A0C4DH35 117 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 E7EQL1 145 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 NPIPB6E9PJ23 425 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 WIPF1O43516 503 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 BRI3O95415 125 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 LOXP28300 417 aaPredicted RBP3.98□□□□□ -1.77
SSR1-202ENST00000397511 AMTNQ6UX39 209 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 LINC00322Q6ZN03 302 aaPredicted RBP3.98□□□□□ -1.77
SSR1-202ENST00000397511 CEND1Q8N111 149 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 EXOC3-AS1Q8N2X6 119 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 OR5AN1Q8NGI8 311 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 PRELID3AQ96N28 172 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 PRO0461Q9UI25 63 aa3.98□□□□□ -1.77
SSR1-202ENST00000397511 IGKV1D-37A0A075B6S9 117 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 GAGE12JA6NER3 117 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 GAGE7O76087 117 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 IGHV3-23P01764 117 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 GAGE12FP0CL80 117 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 GAGE12GP0CL81 117 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 GAGE12IP0CL82 117 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 IGHV1-8P0DP01 117 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 GAGE4Q13068 117 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 TEX36Q5VZQ5 186 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 IGFL3Q6UXB1 125 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 ZNF562Q6V9R5 426 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 ZNF329Q86UD4 541 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 PDPNQ86YL7 162 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 Q8NA96 180 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 C8orf46Q8TAG6 207 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 C7orf69Q9H7B7 122 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 YAE1D1Q9NRH1 226 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 SPANXA1Q9NS26 97 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 ONECUT1Q9UBC0 465 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.97□□□□□ -1.77
SSR1-202ENST00000397511 PRSS29PA6NIE9 313 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 IGLV2-23P01705 113 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 TCF15Q12870 199 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 HES1Q14469 280 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 Q6AWC8 147 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 C17orf77Q96MU5 243 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 SRSF1Q07955 248 aaKnown RBP eCLIP3.97□□□□□ -1.771e-6■■■■□ 20
SSR1-202ENST00000397511 POU2AF1Q16633 256 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 VMA21Q3ZAQ7 101 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 CIARTQ8N365 385 aaPredicted RBP3.97□□□□□ -1.77
SSR1-202ENST00000397511 PIFOQ8TCI5 191 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 FXYD5Q96DB9 178 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 PRSS22Q9GZN4 317 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 ZNF492Q9P255 531 aa3.97□□□□□ -1.77
SSR1-202ENST00000397511 TMSB15BA0A087X1C1 80 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 SUB1P53999 127 aaKnown RBP eCLIP3.96□□□□□ -1.786e-12■■■■■ 31.1
SSR1-202ENST00000397511 RIGQ13278 110 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 CDSNQ15517 529 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 TAL2Q16559 108 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 RRN3P1Q2M238 152 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 C12orf74Q32Q52 190 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 PRNTQ86SH4 94 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 NUP37Q8NFH4 326 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 IFI27L1Q96BM0 104 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 SHISA9B4DS77 424 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 TMEM262E9PQX1 116 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 LTAP01374 205 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 HBDP02042 147 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 PPIFP30405 207 aaKnown RBP3.96□□□□□ -1.78
SSR1-202ENST00000397511 RPL27AP46776 148 aaKnown RBP3.96□□□□□ -1.78
SSR1-202ENST00000397511 TMEM167AQ8TBQ9 72 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 PPDPFLQ8WWR9 84 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 RPEQ96AT9 228 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 SCNM1Q9BWG6 230 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 TMEM133Q9H2Q1 129 aa3.96□□□□□ -1.78
SSR1-202ENST00000397511 TRBV25-1A0A075B6N4 114 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 A0A1B0GUT8 65 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 NPIPB5A8MRT5 1133 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 FABP5P3A8MUU1 101 aa3.95□□□□□ -1.78
SSR1-202ENST00000397511 LCE2BO14633 110 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms