RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 IGHV3-35A0A0C4DH35 117 aa11.36□□□□□ -0.59
CAPN3-207ENST00000397200 DIRC3C9JPN6 131 aa11.36□□□□□ -0.59
CAPN3-207ENST00000397200 CA1P00915 261 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-207ENST00000397200 FRMD6-AS1P0C7T7 363 aa11.36□□□□□ -0.59
CAPN3-207ENST00000397200 LINC00322Q6ZN03 302 aaPredicted RBP11.36□□□□□ -0.59
CAPN3-207ENST00000397200 DUX3Q96PT4 197 aa11.36□□□□□ -0.59
CAPN3-207ENST00000397200 RPP21Q9H633 154 aaKnown RBP11.36□□□□□ -0.59
CAPN3-207ENST00000397200 TRAV8-1A0A0A6YYK1 113 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 SNURFLB1AK76 121 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 CCL24O00175 119 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 AMBPP02760 352 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 HOXD3P31249 432 aaPredicted RBP11.35□□□□□ -0.59
CAPN3-207ENST00000397200 TCL1AP56279 114 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 PSG9Q00887 426 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 PYY3Q5JQD4 70 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 DNLZQ5SXM8 178 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 SHISA2Q6UWI4 295 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 OR10D4PQ8NGN7 298 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 SGK494Q96LW2 274 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 NAT8BQ9UHF3 227 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 ZFP30Q9Y2G7 519 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 SMAD5-AS1Q9Y6J3 95 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 K7EQM0 130 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 S100A12P80511 92 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 PSG3Q16557 428 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 FAM106AQ4KMX7 169 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 PDZD11Q5EBL8 140 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 PRR27Q6MZM9 219 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 OR4B1Q8NGF8 309 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 MDFIQ99750 246 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 GFRA4Q9GZZ7 299 aa11.35□□□□□ -0.59
CAPN3-207ENST00000397200 COL6A5A8TX70 2615 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 ZNF785A8K8V0 405 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 NDUFA4O00483 81 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 BUB3O43684 328 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 HLA-DQA1P01909 254 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 FABP4P15090 132 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 SLURP1P55000 103 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 FHL3Q13643 280 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 COX8CQ7Z4L0 72 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 ATP5L2Q7Z4Y8 100 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 GPHB5Q86YW7 130 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 NUP35Q8NFH5 326 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 PACRGQ96M98 296 aaPredicted RBP11.34□□□□□ -0.59
CAPN3-207ENST00000397200 NEU1Q99519 415 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 AAMDCQ9H7C9 122 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 U3KQE9 123 aa11.34□□□□□ -0.59
CAPN3-207ENST00000397200 A0A1B0GXF2 115 aa11.33□□□□□ -0.6
CAPN3-207ENST00000397200 FAM231BA6NCW3 169 aa11.33□□□□□ -0.6
CAPN3-207ENST00000397200 FBLL1A6NHQ2 334 aaKnown RBP11.33□□□□□ -0.6
CAPN3-207ENST00000397200 ESDP10768 282 aa11.33□□□□□ -0.6
CAPN3-207ENST00000397200 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
CAPN3-207ENST00000397200 TP53TG3Q9ULZ0 132 aa11.33□□□□□ -0.6
CAPN3-207ENST00000397200 PSG8Q9UQ74 426 aa11.33□□□□□ -0.6
CAPN3-207ENST00000397200 A8MWL6 223 aa11.32□□□□□ -0.6
CAPN3-207ENST00000397200 M0R3E3 92 aa11.32□□□□□ -0.6
CAPN3-207ENST00000397200 P01737 135 aa11.32□□□□□ -0.6
CAPN3-207ENST00000397200 PF4P02776 101 aa11.32□□□□□ -0.6
CAPN3-207ENST00000397200 Q0VG73 95 aa11.32□□□□□ -0.6
CAPN3-207ENST00000397200 PRNTQ86SH4 94 aa11.32□□□□□ -0.6
CAPN3-207ENST00000397200 GBGT1Q8N5D6 347 aa11.32□□□□□ -0.6
CAPN3-207ENST00000397200 ZNF331Q9NQX6 463 aaPredicted RBP11.32□□□□□ -0.6
CAPN3-207ENST00000397200 IGHV3OR16-8A0A075B7F1 116 aa11.31□□□□□ -0.6
CAPN3-207ENST00000397200 HIGD1CA8MV81 97 aa11.31□□□□□ -0.6
CAPN3-207ENST00000397200 SYNJ2BPP57105 145 aa11.31□□□□□ -0.6
CAPN3-207ENST00000397200 KLF5Q13887 457 aaPredicted RBP11.31□□□□□ -0.6
CAPN3-207ENST00000397200 MRPL54Q6P161 138 aaKnown RBP11.31□□□□□ -0.6
CAPN3-207ENST00000397200 UNQ9165/PRO28630Q6UXU0 137 aa11.31□□□□□ -0.6
CAPN3-207ENST00000397200 ZC2HC1AQ96GY0 325 aa11.31□□□□□ -0.6
CAPN3-207ENST00000397200 NIT2Q9NQR4 276 aa11.31□□□□□ -0.6
CAPN3-207ENST00000397200 CSN1S1P47710 185 aa11.31□□□□□ -0.6
CAPN3-207ENST00000397200 LINC00310P59036 64 aa11.31□□□□□ -0.6
CAPN3-207ENST00000397200 REC114Q7Z4M0 266 aa11.31□□□□□ -0.6
CAPN3-207ENST00000397200 TMEM18Q96B42 140 aa11.31□□□□□ -0.6
CAPN3-207ENST00000397200 STAB1Q9NY15 2570 aa11.3□□□□□ -0.6
CAPN3-207ENST00000397200 M0QZ24 198 aa11.3□□□□□ -0.6
CAPN3-207ENST00000397200 LGALS9O00182 355 aa11.3□□□□□ -0.6
CAPN3-207ENST00000397200 SPINK4O60575 86 aa11.3□□□□□ -0.6
CAPN3-207ENST00000397200 CRISP2P16562 243 aa11.3□□□□□ -0.6
CAPN3-207ENST00000397200 FOXA3P55318 350 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-207ENST00000397200 GTSF1Q8WW33 167 aa11.3□□□□□ -0.6
CAPN3-207ENST00000397200 DLX4Q92988 240 aaPredicted RBP11.3□□□□□ -0.6
CAPN3-207ENST00000397200 UFC1Q9Y3C8 167 aa11.3□□□□□ -0.6
CAPN3-207ENST00000397200 ZNF207O43670 478 aaKnown RBP11.29□□□□□ -0.6
CAPN3-207ENST00000397200 GDF5OSQ5U4N7 250 aa11.29□□□□□ -0.6
CAPN3-207ENST00000397200 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.29□□□□□ -0.6
CAPN3-207ENST00000397200 TMEM256Q8N2U0 113 aa11.29□□□□□ -0.6
CAPN3-207ENST00000397200 DAZAP1Q96EP5 407 aaKnown RBP11.29□□□□□ -0.6
CAPN3-207ENST00000397200 METTL26Q96S19 204 aa11.29□□□□□ -0.6
CAPN3-207ENST00000397200 SLC50A1Q9BRV3 221 aa11.29□□□□□ -0.6
CAPN3-207ENST00000397200 WNK1Q9H4A3 2382 aa11.29□□□□□ -0.6
CAPN3-207ENST00000397200 GRIFINA4D1Z8 144 aa11.28□□□□□ -0.6
CAPN3-207ENST00000397200 A8MWP6 167 aa11.28□□□□□ -0.6
CAPN3-207ENST00000397200 CHEK1O14757 476 aa11.28□□□□□ -0.6
CAPN3-207ENST00000397200 JOSD1Q15040 202 aaPredicted RBP11.28□□□□□ -0.6
CAPN3-207ENST00000397200 OR10J3Q5JRS4 329 aa11.28□□□□□ -0.6
CAPN3-207ENST00000397200 DAZ1Q9NQZ3 744 aaKnown RBP11.28□□□□□ -0.6
CAPN3-207ENST00000397200 PEMTQ9UBM1 199 aa11.28□□□□□ -0.6
CAPN3-207ENST00000397200 K7EMT4 169 aa11.27□□□□□ -0.6
CAPN3-207ENST00000397200 OVOL1O14753 267 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms