RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 U3KQK5 164 aa7.21□□□□□ -1.26
CAPN3-206ENST00000397163 TPRP12270 2363 aaKnown RBP7.21□□□□□ -1.26
CAPN3-206ENST00000397163 IGHV1-3A0A0C4DH29 117 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 NPYP01303 97 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 COX7A1P24310 79 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 FOXI2Q6ZQN5 318 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 MRPL16Q9NX20 251 aaKnown RBP7.2□□□□□ -1.26
CAPN3-206ENST00000397163 NDUFS7O75251 213 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 APOMO95445 188 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 FOXC1Q12948 553 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 FHL3Q13643 280 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 K7EM74 188 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 GAGE13Q4V321 117 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 C8orf86Q6ZUL3 223 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 ZNF491Q8N8L2 437 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 RPEQ96AT9 228 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 DYNLRB1Q9NP97 96 aa7.2□□□□□ -1.26
CAPN3-206ENST00000397163 BOD1L1Q8NFC6 3051 aa7.19□□□□□ -1.26
CAPN3-206ENST00000397163 B5MCH6 92 aa7.19□□□□□ -1.26
CAPN3-206ENST00000397163 IGLL5B9A064 214 aa7.19□□□□□ -1.26
CAPN3-206ENST00000397163 BSPH1Q075Z2 132 aa7.19□□□□□ -1.26
CAPN3-206ENST00000397163 PHLDA1Q8WV24 401 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-206ENST00000397163 PTH2Q96A98 100 aa7.19□□□□□ -1.26
CAPN3-206ENST00000397163 IGKV2-40A0A087WW87 121 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-206ENST00000397163 LINC01548A6NM66 108 aa7.19□□□□□ -1.26
CAPN3-206ENST00000397163 F8W1H4 67 aa7.19□□□□□ -1.26
CAPN3-206ENST00000397163 K7EIM0 57 aa7.19□□□□□ -1.26
CAPN3-206ENST00000397163 TGFAP01135 160 aa7.19□□□□□ -1.26
CAPN3-206ENST00000397163 IGKV2D-40P01614 121 aaPredicted RBP7.19□□□□□ -1.26
CAPN3-206ENST00000397163 TMEM190Q8WZ59 177 aa7.19□□□□□ -1.26
CAPN3-206ENST00000397163 DMXL1Q9Y485 3027 aa7.19□□□□□ -1.26
CAPN3-206ENST00000397163 TNFRSF13BO14836 293 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-206ENST00000397163 PRSS1P07477 247 aa7.18□□□□□ -1.26
CAPN3-206ENST00000397163 XGP55808 180 aa7.18□□□□□ -1.26
CAPN3-206ENST00000397163 MALRD1Q5VYJ5 2156 aa7.18□□□□□ -1.26
CAPN3-206ENST00000397163 TRBV25-1A0A075B6N4 114 aa7.18□□□□□ -1.26
CAPN3-206ENST00000397163 BUB1B-PAK6H3BSN5 160 aa7.18□□□□□ -1.26
CAPN3-206ENST00000397163 KLF17Q5JT82 389 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-206ENST00000397163 ZNF418Q8TF45 676 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-206ENST00000397163 MAP1LC3AQ9H492 121 aa7.18□□□□□ -1.26
CAPN3-206ENST00000397163 TACC2O95359 2948 aa7.18□□□□□ -1.26
CAPN3-206ENST00000397163 EGR2P11161 476 aaPredicted RBP7.18□□□□□ -1.26
CAPN3-206ENST00000397163 Q8TAT8 98 aa7.18□□□□□ -1.26
CAPN3-206ENST00000397163 NPIPB5A8MRT5 1133 aa7.17□□□□□ -1.26
CAPN3-206ENST00000397163 VSTM5A8MXK1 200 aa7.17□□□□□ -1.26
CAPN3-206ENST00000397163 MRPS12O15235 138 aaKnown RBP7.17□□□□□ -1.26
CAPN3-206ENST00000397163 IGLV1-47P01700 117 aa7.17□□□□□ -1.26
CAPN3-206ENST00000397163 LEPP41159 167 aa7.17□□□□□ -1.26
CAPN3-206ENST00000397163 PAX8Q06710 450 aa7.17□□□□□ -1.26
CAPN3-206ENST00000397163 CDIP1Q9H305 208 aa7.17□□□□□ -1.26
CAPN3-206ENST00000397163 E9PLD3 99 aa7.17□□□□□ -1.26
CAPN3-206ENST00000397163 IGF2-ASQ6U949 168 aa7.17□□□□□ -1.26
CAPN3-206ENST00000397163 CEND1Q8N111 149 aa7.17□□□□□ -1.26
CAPN3-206ENST00000397163 RNASE6Q93091 150 aaKnown RBP7.17□□□□□ -1.26
CAPN3-206ENST00000397163 ANAPC13Q9BS18 74 aa7.17□□□□□ -1.26
CAPN3-206ENST00000397163 KAAG1Q9UBP8 84 aa7.17□□□□□ -1.26
CAPN3-206ENST00000397163 ZZEF1O43149 2961 aa7.17□□□□□ -1.26
CAPN3-206ENST00000397163 FAM90A27PA6NNH2 459 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 GAS8-AS1O95177 125 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 ORM1P02763 201 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 HERV-K104P63124 156 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 PDE6HQ13956 83 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 NFE4Q86UQ8 179 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 PRR25Q96S07 402 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 RALYQ9UKM9 306 aaKnown RBP7.16□□□□□ -1.26
CAPN3-206ENST00000397163 WI2-2373I1.2A0A1W2PRP0 233 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 CEACAM4O75871 244 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 EVI2AP22794 236 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 MAPKAPK5-AS1Q8N8E1 139 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 MSRB1Q9NZV6 116 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 UFC1Q9Y3C8 167 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 TSPAN13O95857 204 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 C5orf64Q2M2E5 130 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 C12orf74Q32Q52 190 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 ZC2HC1BQ5TFG8 222 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 TMEM160Q9NX00 188 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 MSRB2Q9Y3D2 182 aa7.16□□□□□ -1.26
CAPN3-206ENST00000397163 ACACAQ13085 2346 aa7.15□□□□□ -1.26
CAPN3-206ENST00000397163 FOXI1Q12951 378 aa7.15□□□□□ -1.26
CAPN3-206ENST00000397163 ODF1Q14990 250 aa7.15□□□□□ -1.26
CAPN3-206ENST00000397163 IGFL4Q6B9Z1 124 aa7.15□□□□□ -1.26
CAPN3-206ENST00000397163 GFRALQ6UXV0 394 aa7.15□□□□□ -1.26
CAPN3-206ENST00000397163 Q6ZUT4 128 aa7.15□□□□□ -1.26
CAPN3-206ENST00000397163 HIST1H4GQ99525 98 aa7.15□□□□□ -1.26
CAPN3-206ENST00000397163 FOXC2Q99958 501 aa7.15□□□□□ -1.26
CAPN3-206ENST00000397163 RAB1BQ9H0U4 201 aa7.15□□□□□ -1.26
CAPN3-206ENST00000397163 MGAQ8IWI9 3026 aa7.15□□□□□ -1.27
CAPN3-206ENST00000397163 PCNX1Q96RV3 2341 aa7.15□□□□□ -1.27
CAPN3-206ENST00000397163 PRSS29PA6NIE9 313 aa7.15□□□□□ -1.27
CAPN3-206ENST00000397163 TIMM23O14925 209 aa7.15□□□□□ -1.27
CAPN3-206ENST00000397163 IGKCP01834 107 aa7.15□□□□□ -1.27
CAPN3-206ENST00000397163 ZNF80P51504 273 aaPredicted RBP7.15□□□□□ -1.27
CAPN3-206ENST00000397163 PRO0461Q9UI25 63 aa7.15□□□□□ -1.27
CAPN3-206ENST00000397163 CYSLTR1Q9Y271 337 aa7.15□□□□□ -1.27
CAPN3-206ENST00000397163 THBDP07204 575 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 ZNF562Q6V9R5 426 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 FAM57AQ8TBR7 257 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 HIGD1BQ9P298 99 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 LYNX1G3V0Z9 82 aa7.14□□□□□ -1.27
CAPN3-206ENST00000397163 TNFRSF6BO95407 300 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms