RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 CR1LQ2VPA4 569 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 Q9H8V8 135 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 SPRY2O43597 315 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 CCL18P55774 89 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 ZNF362Q5T0B9 420 aaPredicted RBP9.92□□□□□ -0.82
SMU1-201ENST00000397149 DOCK1Q14185 1865 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 DOCK5Q9H7D0 1870 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 STRCQ7RTU9 1775 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 C9orf118A6NHY6 69 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 CDKN1BP46527 198 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 CACNA1EQ15878 2313 aa9.92□□□□□ -0.82
SMU1-201ENST00000397149 CACNA1BQ00975 2339 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 UNQ6494/PRO21346Q6UXR6 183 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 TMEM105Q8N8V8 129 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 WFDC11Q8NEX6 87 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 ZNF664Q8N3J9 261 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 IGKV1-27A0A075B6S5 117 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 A0A0J9YWU9 116 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 NTN3O00634 580 aaPredicted RBP9.91□□□□□ -0.82
SMU1-201ENST00000397149 CEND1Q8N111 149 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 FBLIM1Q8WUP2 373 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 K7EMI3 77 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 ZFP2Q6ZN57 461 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 FBLN5Q9UBX5 448 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 COL6A6A6NMZ7 2263 aa9.91□□□□□ -0.82
SMU1-201ENST00000397149 CHD3Q12873 2000 aaKnown RBP9.91□□□□□ -0.82
SMU1-201ENST00000397149 KIF26BQ2KJY2 2108 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 SCN7AQ01118 1682 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 MPZP25189 248 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 DYNAPQ8N1N2 210 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 MRPL51Q4U2R6 128 aaKnown RBP9.9□□□□□ -0.82
SMU1-201ENST00000397149 SMIM20Q8N5G0 67 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 MRPL35Q9NZE8 188 aaKnown RBP9.9□□□□□ -0.82
SMU1-201ENST00000397149 NDUFB8O95169 186 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 HIST2H2BCQ6DN03 193 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 Q8N8P6 123 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 C17orf77Q96MU5 243 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 LINC00473A8K010 186 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 PFN1P07737 140 aaKnown RBP9.9□□□□□ -0.82
SMU1-201ENST00000397149 C8orf86Q6ZUL3 223 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 SPANXA1Q9NS26 97 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 U3KQE9 123 aa9.9□□□□□ -0.82
SMU1-201ENST00000397149 IGLC2P0DOY2 106 aa9.9□□□□□ -0.83
SMU1-201ENST00000397149 IGLC3P0DOY3 106 aa9.9□□□□□ -0.83
SMU1-201ENST00000397149 GTSF1Q8WW33 167 aa9.9□□□□□ -0.83
SMU1-201ENST00000397149 GAFA1Q96PS6 74 aa9.9□□□□□ -0.83
SMU1-201ENST00000397149 A0A0U1RQV1 116 aa9.89□□□□□ -0.83
SMU1-201ENST00000397149 F8W1H4 67 aa9.89□□□□□ -0.83
SMU1-201ENST00000397149 J3QQQ9 107 aa9.89□□□□□ -0.83
SMU1-201ENST00000397149 MESP1Q9BRJ9 268 aa9.89□□□□□ -0.83
SMU1-201ENST00000397149 IGKV1-16P04430 117 aa9.89□□□□□ -0.83
SMU1-201ENST00000397149 LAIR2Q6ISS4 152 aa9.89□□□□□ -0.83
SMU1-201ENST00000397149 PAPPA2Q9BXP8 1791 aa9.89□□□□□ -0.83
SMU1-201ENST00000397149 PIFOQ8TCI5 191 aa9.89□□□□□ -0.83
SMU1-201ENST00000397149 KLF2Q9Y5W3 355 aaPredicted RBP9.89□□□□□ -0.83
SMU1-201ENST00000397149 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.89□□□□□ -0.83
SMU1-201ENST00000397149 K7EP13 123 aa9.88□□□□□ -0.83
SMU1-201ENST00000397149 IGKV1-12A0A0C4DH73 117 aa9.88□□□□□ -0.83
SMU1-201ENST00000397149 DEFB136Q30KP8 78 aa9.88□□□□□ -0.83
SMU1-201ENST00000397149 BVES-AS1Q5T3Y7 98 aa9.88□□□□□ -0.83
SMU1-201ENST00000397149 SHANK2-AS3Q9BTD1 123 aa9.88□□□□□ -0.83
SMU1-201ENST00000397149 TRBV24-1A0A075B6N3 115 aa9.88□□□□□ -0.83
SMU1-201ENST00000397149 SRRM5B3KS81 715 aa9.88□□□□□ -0.83
SMU1-201ENST00000397149 NMSQ5H8A3 153 aa9.88□□□□□ -0.83
SMU1-201ENST00000397149 APRG1Q8IVJ8 170 aa9.88□□□□□ -0.83
SMU1-201ENST00000397149 LYPD1Q8N2G4 141 aa9.88□□□□□ -0.83
SMU1-201ENST00000397149 C3orf22Q8N5N4 141 aa9.88□□□□□ -0.83
SMU1-201ENST00000397149 OOSP1A8MZH6 123 aa9.88□□□□□ -0.83
SMU1-201ENST00000397149 MRPL27Q9P0M9 148 aaKnown RBP9.88□□□□□ -0.83
SMU1-201ENST00000397149 NHSL1Q5SYE7 1610 aa9.87□□□□□ -0.83
SMU1-201ENST00000397149 GYPEP15421 78 aa9.87□□□□□ -0.83
SMU1-201ENST00000397149 LY6G6FQ5SQ64 297 aa9.87□□□□□ -0.83
SMU1-201ENST00000397149 TDRD15B5MCY1 1934 aaKnown RBP9.87□□□□□ -0.83
SMU1-201ENST00000397149 IGHV4-30-2A0A087WSY4 118 aa9.87□□□□□ -0.83
SMU1-201ENST00000397149 RNF138Q8WVD3 245 aa9.87□□□□□ -0.83
SMU1-201ENST00000397149 CASP8AP2Q9UKL3 1982 aa9.87□□□□□ -0.83
SMU1-201ENST00000397149 DEFB4AO15263 64 aa9.87□□□□□ -0.83
SMU1-201ENST00000397149 WNK2Q9Y3S1 2297 aa9.87□□□□□ -0.83
SMU1-201ENST00000397149 RHOHQ15669 191 aa9.87□□□□□ -0.83
SMU1-201ENST00000397149 POLR2AP24928 1970 aaKnown RBP9.86□□□□□ -0.83
SMU1-201ENST00000397149 IGLV3-21P80748 117 aaPredicted RBP9.86□□□□□ -0.83
SMU1-201ENST00000397149 MRPL36Q9P0J6 103 aaKnown RBP9.86□□□□□ -0.83
SMU1-201ENST00000397149 BCORQ6W2J9 1755 aa9.86□□□□□ -0.83
SMU1-201ENST00000397149 HLA-DMBP28068 263 aa9.86□□□□□ -0.83
SMU1-201ENST00000397149 HIGD2BQ4VC39 106 aa9.86□□□□□ -0.83
SMU1-201ENST00000397149 GNRH2O43555 120 aa9.86□□□□□ -0.83
SMU1-201ENST00000397149 MRPL55Q7Z7F7 128 aaKnown RBP9.86□□□□□ -0.83
SMU1-201ENST00000397149 DOCK6Q96HP0 2047 aa9.86□□□□□ -0.83
SMU1-201ENST00000397149 IGKV2-24A0A0C4DH68 120 aa9.86□□□□□ -0.83
SMU1-201ENST00000397149 A0A1W2PPM0 123 aa9.86□□□□□ -0.83
SMU1-201ENST00000397149 COLCA2A8K830 154 aa9.86□□□□□ -0.83
SMU1-201ENST00000397149 PYY3Q5JQD4 70 aa9.86□□□□□ -0.83
SMU1-201ENST00000397149 LYPD6Q86Y78 171 aa9.86□□□□□ -0.83
SMU1-201ENST00000397149 PRSS46E5RG02 174 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 SLC25A29Q8N8R3 303 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 KLHDC3Q9BQ90 382 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 POLR3KQ9Y2Y1 108 aaPredicted RBP9.85□□□□□ -0.83
SMU1-201ENST00000397149 COL22A1Q8NFW1 1626 aaPredicted RBP9.85□□□□□ -0.83
SMU1-201ENST00000397149 DAND5Q8N907 189 aa9.85□□□□□ -0.83
SMU1-201ENST00000397149 KIAA1551Q9HCM1 1747 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms