RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 CD28P10747 220 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 GP9P14770 177 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 ZNF705AQ6ZN79 300 aaPredicted RBP11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 ATP5L2Q7Z4Y8 100 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 C18orf32Q8TCD1 76 aa11.4□□□□□ -0.58
TM9SF1-202ENST00000396854 OR2T8A6NH00 312 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 HYPMO75409 117 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 SCGB2A1O75556 95 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 CTSGP08311 255 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 LGALS1P09382 135 aaKnown RBP11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 NBEAP1P0C6P0 100 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 PMCHP20382 165 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 NIT1Q86X76 327 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 ATG101Q9BSB4 218 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 SETD2Q9BYW2 2564 aaPredicted RBP11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 PGPA6NDG6 321 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 KLF5Q13887 457 aaPredicted RBP11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 GDF5OSQ5U4N7 250 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 C5orf17Q8NAS9 161 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 BLNKQ8WV28 456 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 GPR82Q96P67 336 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 MLST8Q9BVC4 326 aa11.39□□□□□ -0.59
TM9SF1-202ENST00000396854 A0A1B0GXF2 115 aa11.38□□□□□ -0.59
TM9SF1-202ENST00000396854 TOMM40O96008 361 aa11.38□□□□□ -0.59
TM9SF1-202ENST00000396854 KRTAP10-3P60369 221 aa11.38□□□□□ -0.59
TM9SF1-202ENST00000396854 PRR27Q6MZM9 219 aa11.38□□□□□ -0.59
TM9SF1-202ENST00000396854 C4orf3Q8WVX3 66 aa11.38□□□□□ -0.59
TM9SF1-202ENST00000396854 FMC1Q96HJ9 113 aa11.38□□□□□ -0.59
TM9SF1-202ENST00000396854 PEF1Q9UBV8 284 aaKnown RBP11.38□□□□□ -0.59
TM9SF1-202ENST00000396854 TSSC4Q9Y5U2 329 aaPredicted RBP11.38□□□□□ -0.59
TM9SF1-202ENST00000396854 HIGD1CA8MV81 97 aa11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 TRBV12-3P01733 135 aa11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 CTRLP40313 264 aa11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 CT83Q5H943 113 aa11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 CITED2Q99967 270 aaPredicted RBP11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 ZNF492Q9P255 531 aa11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 LTAP01374 205 aa11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 PSG1P11464 419 aa11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 ARL3P36405 182 aa11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 KHDC1LQ5JSQ8 128 aa11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 C11orf44Q8N8P7 122 aa11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 ZNF414Q96IQ9 312 aa11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 RPP21Q9H633 154 aaKnown RBP11.37□□□□□ -0.59
TM9SF1-202ENST00000396854 C3orf79P0CE67 100 aa11.36□□□□□ -0.59
TM9SF1-202ENST00000396854 C18orf65Q6ZTR6 163 aa11.36□□□□□ -0.59
TM9SF1-202ENST00000396854 TCRAP04437 139 aa11.36□□□□□ -0.59
TM9SF1-202ENST00000396854 KLHL30-AS1Q8NEE0 82 aa11.36□□□□□ -0.59
TM9SF1-202ENST00000396854 ALKBH7Q9BT30 221 aaPredicted RBP11.36□□□□□ -0.59
TM9SF1-202ENST00000396854 Q9H3A6 140 aa11.36□□□□□ -0.59
TM9SF1-202ENST00000396854 TMEM14CQ9P0S9 112 aa11.36□□□□□ -0.59
TM9SF1-202ENST00000396854 HIGD1AQ9Y241 93 aa11.36□□□□□ -0.59
TM9SF1-202ENST00000396854 C19orf71A6NCJ1 209 aa11.35□□□□□ -0.59
TM9SF1-202ENST00000396854 RELQ04864 619 aaPredicted RBP11.35□□□□□ -0.59
TM9SF1-202ENST00000396854 FAM19A2Q8N3H0 131 aa11.35□□□□□ -0.59
TM9SF1-202ENST00000396854 TMEM158Q8WZ71 300 aa11.35□□□□□ -0.59
TM9SF1-202ENST00000396854 ADARB2-AS1A8MUL3 147 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 A8MWL6 223 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 LYZP61626 148 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 SPATA45Q537H7 98 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 HIST2H2BDQ6DRA6 164 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 TMEM190Q8WZ59 177 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 BORCS7Q96B45 105 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 OTORQ9NRC9 128 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 RPH3ALQ9UNE2 315 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 ATRQ13535 2644 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 WI2-2373I1.2A0A1W2PRP0 233 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 HBBP68871 147 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 LINC00322Q6ZN03 302 aaPredicted RBP11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 NDUFA11Q86Y39 141 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 SGK494Q96LW2 274 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 CITED1Q99966 193 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 GFRA4Q9GZZ7 299 aa11.34□□□□□ -0.59
TM9SF1-202ENST00000396854 IGHV4OR15-8A0A075B7B6 117 aa11.33□□□□□ -0.6
TM9SF1-202ENST00000396854 A0A087WW49 117 aa11.33□□□□□ -0.6
TM9SF1-202ENST00000396854 HSBP1O75506 76 aa11.33□□□□□ -0.6
TM9SF1-202ENST00000396854 P01737 135 aa11.33□□□□□ -0.6
TM9SF1-202ENST00000396854 NTF3P20783 257 aa11.33□□□□□ -0.6
TM9SF1-202ENST00000396854 LEMD1Q68G75 181 aa11.33□□□□□ -0.6
TM9SF1-202ENST00000396854 C8orf86Q6ZUL3 223 aa11.33□□□□□ -0.6
TM9SF1-202ENST00000396854 ZFAND3Q9H8U3 227 aa11.33□□□□□ -0.6
TM9SF1-202ENST00000396854 FBN1P35555 2871 aaKnown RBP11.33□□□□□ -0.6
TM9SF1-202ENST00000396854 CAMPP49913 170 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 TCF24Q7RTU0 167 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 RNF125Q96EQ8 232 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 SSBP4Q9BWG4 385 aaPredicted RBP11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 SLC25A39Q9BZJ4 359 aaPredicted RBP11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 TRBV6-1A0A0K0K1D8 114 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 FAM231BA6NCW3 169 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 NPIPB6E9PJ23 425 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 H3BRN7 92 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 NDUFA4O00483 81 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 DEFB136Q30KP8 78 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 Q86TA4 180 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 GPHB5Q86YW7 130 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 OR11H1Q8NG94 326 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 GTSF1Q8WW33 167 aa11.32□□□□□ -0.6
TM9SF1-202ENST00000396854 IGHV3-35A0A0C4DH35 117 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 LINC01619G3V211 115 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 H3BTX0 84 aa11.31□□□□□ -0.6
TM9SF1-202ENST00000396854 IL4P05112 153 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms