RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 DIRC1Q969H9 104 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 ISOC1Q96CN7 298 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 LRTM1Q9HBL6 345 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 TAF9BQ9HBM6 251 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 TNCP24821 2201 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 NISCHQ9Y2I1 1504 aa0.22□□□□□ -2.37
CMC1-202ENST00000396610 MEGF8Q7Z7M0 2845 aa0.21□□□□□ -2.38
CMC1-202ENST00000396610 C3orf85A0A1B0GTC6 90 aa0.21□□□□□ -2.38
CMC1-202ENST00000396610 CAV3P56539 151 aa0.21□□□□□ -2.38
CMC1-202ENST00000396610 QRFPP83859 136 aa0.21□□□□□ -2.38
CMC1-202ENST00000396610 CDC26Q8NHZ8 85 aa0.21□□□□□ -2.38
CMC1-202ENST00000396610 BOLA2Q9H3K6 86 aa0.21□□□□□ -2.38
CMC1-202ENST00000396610 BIN3Q9NQY0 253 aa0.21□□□□□ -2.38
CMC1-202ENST00000396610 GID8Q9NWU2 228 aa0.21□□□□□ -2.38
CMC1-202ENST00000396610 KCPQ6ZWJ8 1503 aa0.21□□□□□ -2.38
CMC1-202ENST00000396610 FRMPD1Q5SYB0 1578 aa0.2□□□□□ -2.38
CMC1-202ENST00000396610 NDUFA6P56556 154 aa0.2□□□□□ -2.38
CMC1-202ENST00000396610 C3orf33Q6P1S2 294 aa0.2□□□□□ -2.38
CMC1-202ENST00000396610 ANGPTL5Q86XS5 388 aa0.2□□□□□ -2.38
CMC1-202ENST00000396610 OR5H6Q8NGV6 325 aa0.2□□□□□ -2.38
CMC1-202ENST00000396610 AP1S3Q96PC3 154 aa0.2□□□□□ -2.38
CMC1-202ENST00000396610 HOPXQ9BPY8 73 aaPredicted RBP0.2□□□□□ -2.38
CMC1-202ENST00000396610 MYLKQ15746 1914 aa0.2□□□□□ -2.38
CMC1-202ENST00000396610 TRPM1Q7Z4N2 1603 aa0.2□□□□□ -2.38
CMC1-202ENST00000396610 SYNE1Q8NF91 8797 aaKnown RBP0.19□□□□□ -2.38
CMC1-202ENST00000396610 TRDV1A0A1B0GX56 115 aa0.19□□□□□ -2.38
CMC1-202ENST00000396610 TMEM238C9JI98 176 aa0.19□□□□□ -2.38
CMC1-202ENST00000396610 GYPBP06028 91 aa0.19□□□□□ -2.38
CMC1-202ENST00000396610 TPT1P13693 172 aaKnown RBP0.19□□□□□ -2.38
CMC1-202ENST00000396610 SERPINB1P30740 379 aa0.19□□□□□ -2.38
CMC1-202ENST00000396610 CRYBA4P53673 196 aa0.19□□□□□ -2.38
CMC1-202ENST00000396610 XAF1Q6GPH4 301 aa0.19□□□□□ -2.38
CMC1-202ENST00000396610 DCUN1D2Q6PH85 259 aa0.19□□□□□ -2.38
CMC1-202ENST00000396610 C10orf99Q6UWK7 81 aa0.19□□□□□ -2.38
CMC1-202ENST00000396610 SPINK6Q6UWN8 80 aa0.19□□□□□ -2.38
CMC1-202ENST00000396610 TMEM229BQ8NBD8 167 aa0.19□□□□□ -2.38
CMC1-202ENST00000396610 PRELID3AQ96N28 172 aa0.19□□□□□ -2.38
CMC1-202ENST00000396610 CIB3Q96Q77 187 aaPredicted RBP0.19□□□□□ -2.38
CMC1-202ENST00000396610 KIAA1107Q9UPP5 1409 aa0.19□□□□□ -2.38
CMC1-202ENST00000396610 MAP1LC3B2A6NCE7 125 aa0.18□□□□□ -2.38
CMC1-202ENST00000396610 PPP5D1E7EU14 171 aa0.18□□□□□ -2.38
CMC1-202ENST00000396610 GABARAPH6UMI1 98 aa0.18□□□□□ -2.38
CMC1-202ENST00000396610 RPS3P23396 243 aaKnown RBP eCLIP0.18□□□□□ -2.38
CMC1-202ENST00000396610 SDC2P34741 201 aa0.18□□□□□ -2.38
CMC1-202ENST00000396610 SNRPD3P62318 126 aaKnown RBP0.18□□□□□ -2.38
CMC1-202ENST00000396610 CLEC2BQ92478 149 aa0.18□□□□□ -2.38
CMC1-202ENST00000396610 LPAR5Q9H1C0 372 aa0.18□□□□□ -2.38
CMC1-202ENST00000396610 MAST4O15021 2626 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 DSPPQ9NZW4 1301 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 TPRP12270 2363 aaKnown RBP0.17□□□□□ -2.38
CMC1-202ENST00000396610 FSIP2Q5CZC0 6907 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 LOC107984156A0A0G2JMH3 177 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 PRORSD1PA6NEY8 169 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 BBIP1A8MTZ0 92 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 H7BYZ3 331 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 LY6G6CO95867 125 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 BCL2P10415 239 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 SPINK13Q1W4C9 94 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 TRIQKQ629K1 86 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 CSAG1Q6PB30 78 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 IZUMO2Q6UXV1 221 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 C3orf62Q6ZUJ4 267 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 ARL17AQ8IVW1 177 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 TCTEX1D1Q8N7M0 179 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 LAMTOR2Q9Y2Q5 125 aa0.17□□□□□ -2.38
CMC1-202ENST00000396610 YTHDC2Q9H6S0 1430 aaKnown RBP0.16□□□□□ -2.38
CMC1-202ENST00000396610 TRAPPC8Q9Y2L5 1435 aa0.16□□□□□ -2.38
CMC1-202ENST00000396610 A0A1W2PPB8 328 aa0.16□□□□□ -2.38
CMC1-202ENST00000396610 A0A1W2PRS3 328 aa0.16□□□□□ -2.38
CMC1-202ENST00000396610 ARL5CA6NH57 179 aa0.16□□□□□ -2.38
CMC1-202ENST00000396610 KIR3DP1A8MWS1 328 aa0.16□□□□□ -2.38
CMC1-202ENST00000396610 S100A11P31949 105 aa0.16□□□□□ -2.38
CMC1-202ENST00000396610 GLYATL3Q5SZD4 288 aa0.16□□□□□ -2.38
CMC1-202ENST00000396610 LINC00305Q7Z4B0 112 aa0.16□□□□□ -2.38
CMC1-202ENST00000396610 LINC00208Q96KT6 92 aa0.16□□□□□ -2.38
CMC1-202ENST00000396610 NABP2Q9BQ15 211 aa0.16□□□□□ -2.38
CMC1-202ENST00000396610 FKBP11Q9NYL4 201 aa0.16□□□□□ -2.38
CMC1-202ENST00000396610 UBR2Q8IWV8 1755 aa0.16□□□□□ -2.38
CMC1-202ENST00000396610 TECPR2O15040 1411 aa0.15□□□□□ -2.39
CMC1-202ENST00000396610 N4BP2Q86UW6 1770 aaPredicted RBP0.15□□□□□ -2.39
CMC1-202ENST00000396610 TRBV27A0A0K0K1C4 114 aa0.15□□□□□ -2.39
CMC1-202ENST00000396610 SAA1P0DJI8 122 aaPredicted RBP0.15□□□□□ -2.39
CMC1-202ENST00000396610 EVI2AP22794 236 aa0.15□□□□□ -2.39
CMC1-202ENST00000396610 G0S2P27469 103 aa0.15□□□□□ -2.39
CMC1-202ENST00000396610 DNAJB13P59910 316 aa0.15□□□□□ -2.39
CMC1-202ENST00000396610 MAXP61244 160 aa0.15□□□□□ -2.39
CMC1-202ENST00000396610 CCDC32Q9BV29 185 aa0.15□□□□□ -2.39
CMC1-202ENST00000396610 E5RI56 91 aa0.14□□□□□ -2.39
CMC1-202ENST00000396610 H3BMG7 143 aa0.14□□□□□ -2.39
CMC1-202ENST00000396610 PFDN1O60925 122 aa0.14□□□□□ -2.39
CMC1-202ENST00000396610 ZNF56Q15929 161 aa0.14□□□□□ -2.39
CMC1-202ENST00000396610 STX12Q86Y82 276 aa0.14□□□□□ -2.39
CMC1-202ENST00000396610 SREK1IP1Q8N9Q2 155 aaPredicted RBP0.14□□□□□ -2.39
CMC1-202ENST00000396610 MRPL36Q9P0J6 103 aaKnown RBP0.14□□□□□ -2.39
CMC1-202ENST00000396610 MPC1Q9Y5U8 109 aa0.14□□□□□ -2.39
CMC1-202ENST00000396610 PTPRZ1P23471 2315 aaPredicted RBP0.14□□□□□ -2.39
CMC1-202ENST00000396610 ZFYVE26Q68DK2 2539 aa0.14□□□□□ -2.39
CMC1-202ENST00000396610 NUP210LQ5VU65 1888 aa0.14□□□□□ -2.39
CMC1-202ENST00000396610 PTPRDP23468 1912 aa0.13□□□□□ -2.39
CMC1-202ENST00000396610 PIEZO1Q92508 2521 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms