RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 FLVCR1-AS1Q8TAF5 88 aa11.3□□□□□ -0.6
COL4A3-202ENST00000396578 NPSP0C0P6 89 aa11.3□□□□□ -0.6
COL4A3-202ENST00000396578 FRMPD3Q5JV73 1810 aa11.3□□□□□ -0.6
COL4A3-202ENST00000396578 LGALS9BQ3B8N2 356 aa11.3□□□□□ -0.6
COL4A3-202ENST00000396578 LGALS9CQ6DKI2 356 aa11.3□□□□□ -0.6
COL4A3-202ENST00000396578 BRD3OSQ6XYD6 125 aa11.3□□□□□ -0.6
COL4A3-202ENST00000396578 A0A1B0GUS0 222 aa11.29□□□□□ -0.6
COL4A3-202ENST00000396578 MRPL51Q4U2R6 128 aaKnown RBP11.29□□□□□ -0.6
COL4A3-202ENST00000396578 CARD19Q96LW7 228 aa11.29□□□□□ -0.6
COL4A3-202ENST00000396578 HS3ST6Q96QI5 342 aa11.29□□□□□ -0.6
COL4A3-202ENST00000396578 PLXNA4Q9HCM2 1894 aa11.29□□□□□ -0.6
COL4A3-202ENST00000396578 IGKV1-16P04430 117 aa11.29□□□□□ -0.6
COL4A3-202ENST00000396578 CFHR1Q03591 330 aa11.29□□□□□ -0.6
COL4A3-202ENST00000396578 SMIM27A0A1W2PRY6 76 aa11.29□□□□□ -0.6
COL4A3-202ENST00000396578 TMEM14BQ9NUH8 114 aa11.29□□□□□ -0.6
COL4A3-202ENST00000396578 RNF114Q9Y508 228 aa11.29□□□□□ -0.6
COL4A3-202ENST00000396578 EFNA2O43921 213 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 FOXG1P55316 489 aaPredicted RBP11.28□□□□□ -0.6
COL4A3-202ENST00000396578 TMEM243Q9BU79 118 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 IGLC2P0DOY2 106 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 IGLC3P0DOY3 106 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 GAGE12JA6NER3 117 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 H3BMG7 143 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 HLA-DRB4P13762 266 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 GAGE4Q13068 117 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 GAGE5Q13069 117 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 GAGE6Q13070 117 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 BOD1L2Q8IYS8 172 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 HLA-DRB4X5D2U9 266 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 A0A1W2PPI3 338 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 IGHV2-70P01814 119 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 SAA4P35542 130 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 BVES-AS1Q5T3Y7 98 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 KIAA1549Q9HCM3 1950 aa11.28□□□□□ -0.6
COL4A3-202ENST00000396578 SYNJ2BPP57105 145 aa11.27□□□□□ -0.6
COL4A3-202ENST00000396578 MED13Q9UHV7 2174 aa11.27□□□□□ -0.6
COL4A3-202ENST00000396578 SHISA9B4DS77 424 aa11.27□□□□□ -0.6
COL4A3-202ENST00000396578 SPINK13Q1W4C9 94 aa11.27□□□□□ -0.6
COL4A3-202ENST00000396578 Q6ZWC4 215 aa11.27□□□□□ -0.6
COL4A3-202ENST00000396578 IGKV1D-17A0A075B6S4 117 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 LINC00205P59089 165 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 IGHV3-16A0A0C4DH30 117 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 F5H768 121 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 NDUFS5O43920 106 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 NDUFA12Q9UI09 145 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 DEFB131AP59861 70 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 TAL2Q16559 108 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 MED12LQ86YW9 2145 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 F8VRH5 84 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 DAD1P61803 113 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 CFHR3Q02985 330 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 CYYR1Q96J86 154 aa11.27□□□□□ -0.61
COL4A3-202ENST00000396578 A0A0G2JRQ6 117 aa11.26□□□□□ -0.61
COL4A3-202ENST00000396578 SRSF2Q01130 221 aaKnown RBP11.26□□□□□ -0.61
COL4A3-202ENST00000396578 ZFP36L1Q07352 338 aaKnown RBP11.26□□□□□ -0.61
COL4A3-202ENST00000396578 KLF5Q13887 457 aaPredicted RBP11.26□□□□□ -0.61
COL4A3-202ENST00000396578 SDHAF1A6NFY7 115 aa11.26□□□□□ -0.61
COL4A3-202ENST00000396578 KIF26AQ9ULI4 1882 aaPredicted RBP11.26□□□□□ -0.61
COL4A3-202ENST00000396578 K7ERJ3 54 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 SIVA1O15304 175 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 HERVK_113P63121 156 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 TRAV26-2A0A0B4J265 109 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 MLANAQ16655 118 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 LINC01356Q8N9X3 169 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 DSCAML1Q8TD84 2053 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 OVOL3O00110 214 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 NBL1P41271 181 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 CRYBA4P53673 196 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 Q6ZRM9 215 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 SIGLEC8Q9NYZ4 499 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 SPACA3Q8IXA5 215 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 PRDM6Q9NQX0 595 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 CACNA1HO95180 2353 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 HCFC1P51610 2035 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 A0A0G2JNJ9 132 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 TINCRA0A1B0GVN0 87 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 Q9UFV3 132 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 KLK9Q9UKQ9 250 aa11.25□□□□□ -0.61
COL4A3-202ENST00000396578 KNCNA6PVL3 124 aa11.24□□□□□ -0.61
COL4A3-202ENST00000396578 GAGE7O76087 117 aa11.24□□□□□ -0.61
COL4A3-202ENST00000396578 GAGE12FP0CL80 117 aa11.24□□□□□ -0.61
COL4A3-202ENST00000396578 GAGE12GP0CL81 117 aa11.24□□□□□ -0.61
COL4A3-202ENST00000396578 GAGE12IP0CL82 117 aa11.24□□□□□ -0.61
COL4A3-202ENST00000396578 C5orf24Q7Z6I8 188 aa11.24□□□□□ -0.61
COL4A3-202ENST00000396578 IGLL1P15814 213 aa11.24□□□□□ -0.61
COL4A3-202ENST00000396578 COL4A5P29400 1685 aa11.24□□□□□ -0.61
COL4A3-202ENST00000396578 YPEL3P61236 119 aaPredicted RBP11.24□□□□□ -0.61
COL4A3-202ENST00000396578 LY6DQ14210 128 aa11.24□□□□□ -0.61
COL4A3-202ENST00000396578 XCL2Q9UBD3 114 aa11.24□□□□□ -0.61
COL4A3-202ENST00000396578 NTN3O00634 580 aaPredicted RBP11.24□□□□□ -0.61
COL4A3-202ENST00000396578 MRPL35Q9NZE8 188 aaKnown RBP11.24□□□□□ -0.61
COL4A3-202ENST00000396578 V9GYV3 84 aa11.24□□□□□ -0.61
COL4A3-202ENST00000396578 TNRC6BQ9UPQ9 1833 aaKnown RBP11.24□□□□□ -0.61
COL4A3-202ENST00000396578 PAX9P55771 341 aa11.24□□□□□ -0.61
COL4A3-202ENST00000396578 C5orf47Q569G3 176 aa11.23□□□□□ -0.61
COL4A3-202ENST00000396578 C8orf86Q6ZUL3 223 aa11.23□□□□□ -0.61
COL4A3-202ENST00000396578 CFHR4Q92496 578 aa11.23□□□□□ -0.61
COL4A3-202ENST00000396578 KLHDC3Q9BQ90 382 aa11.23□□□□□ -0.61
COL4A3-202ENST00000396578 TRBV19A0A075B6N1 114 aa11.23□□□□□ -0.61
COL4A3-202ENST00000396578 CFPP27918 469 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms