RNA–Protein interactions for RNA: ENST00000393211.3

COL17A1-203, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL17A1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-203ENST00000393211 ZNF502Q8TBZ5 544 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 ATP6V0BQ99437 205 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 DKK2Q9UBU2 259 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 HHLA3Q9XRX5 114 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 IGHV4-4A0A075B6R2 117 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 IGHV7-81A0A0B4J1V7 117 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 BUB3O43684 328 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 IGKCP01834 107 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 SMIM17P0DL12 118 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 TMEM11P17152 192 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 NMUP48645 174 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 KLRD1Q13241 179 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 TAL2Q16559 108 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 IL17RELQ6ZVW7 336 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 NEGR1Q7Z3B1 354 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 DYNAPQ8N1N2 210 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 CSTL1Q9H114 145 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 ZFAND3Q9H8U3 227 aa7.74□□□□□ -1.17
COL17A1-203ENST00000393211 MUC6Q6W4X9 2439 aa7.73□□□□□ -1.17
COL17A1-203ENST00000393211 IGLV2-18A0A075B6J9 118 aa7.73□□□□□ -1.17
COL17A1-203ENST00000393211 G3V4G9 280 aa7.73□□□□□ -1.17
COL17A1-203ENST00000393211 DPM2O94777 84 aa7.73□□□□□ -1.17
COL17A1-203ENST00000393211 PRSS1P07477 247 aa7.73□□□□□ -1.17
COL17A1-203ENST00000393211 FABP2P12104 132 aa7.73□□□□□ -1.17
COL17A1-203ENST00000393211 DTX2Q86UW9 622 aa7.73□□□□□ -1.17
COL17A1-203ENST00000393211 PCP2Q8IVA1 136 aa7.73□□□□□ -1.17
COL17A1-203ENST00000393211 Q8N9W7 124 aa7.73□□□□□ -1.17
COL17A1-203ENST00000393211 JMJD8Q96S16 334 aa7.73□□□□□ -1.17
COL17A1-203ENST00000393211 FXYD7P58549 80 aa7.72□□□□□ -1.17
COL17A1-203ENST00000393211 PRR30Q53SZ7 412 aaPredicted RBP7.72□□□□□ -1.17
COL17A1-203ENST00000393211 C11orf71Q6IPW1 123 aa7.72□□□□□ -1.17
COL17A1-203ENST00000393211 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.72□□□□□ -1.17
COL17A1-203ENST00000393211 TM2D2Q9BX73 214 aa7.72□□□□□ -1.17
COL17A1-203ENST00000393211 MSRB1Q9NZV6 116 aa7.72□□□□□ -1.17
COL17A1-203ENST00000393211 MSRB2Q9Y3D2 182 aa7.72□□□□□ -1.17
COL17A1-203ENST00000393211 CACNA1HO95180 2353 aa7.72□□□□□ -1.17
COL17A1-203ENST00000393211 K7ENP7 123 aa7.71□□□□□ -1.17
COL17A1-203ENST00000393211 IGHV3-23P01764 117 aa7.71□□□□□ -1.17
COL17A1-203ENST00000393211 TCF15Q12870 199 aa7.71□□□□□ -1.17
COL17A1-203ENST00000393211 LAGE3Q14657 143 aa7.71□□□□□ -1.17
COL17A1-203ENST00000393211 SAMD5Q5TGI4 173 aa7.71□□□□□ -1.17
COL17A1-203ENST00000393211 C9orf47Q6ZRZ4 202 aa7.71□□□□□ -1.17
COL17A1-203ENST00000393211 MYOZ3Q8TDC0 251 aa7.71□□□□□ -1.17
COL17A1-203ENST00000393211 TMEM158Q8WZ71 300 aa7.71□□□□□ -1.17
COL17A1-203ENST00000393211 MEGF9Q9H1U4 602 aa7.71□□□□□ -1.17
COL17A1-203ENST00000393211 LENEPQ9Y5L5 61 aa7.71□□□□□ -1.17
COL17A1-203ENST00000393211 SPCS1Q9Y6A9 102 aa7.71□□□□□ -1.17
COL17A1-203ENST00000393211 ABCA1O95477 2261 aa7.71□□□□□ -1.18
COL17A1-203ENST00000393211 PKDREJQ9NTG1 2253 aa7.71□□□□□ -1.18
COL17A1-203ENST00000393211 ROS1P08922 2347 aa7.71□□□□□ -1.18
COL17A1-203ENST00000393211 TRBV7-1A0A0A6YYK4 115 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 IGKV3D-20A0A0C4DH25 116 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 LINC01619G3V211 115 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 K7EMI3 77 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 HLA-DMBP28068 263 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 ERCC8Q13216 396 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 C15orf32Q32M92 178 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 TMEM78Q5T7P6 136 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 MRAP2Q96G30 205 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 C18orf15Q96N68 181 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 CHAC1Q9BUX1 264 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 SIRPDQ9H106 197 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 U3KQE9 123 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 TRAV12-1A0A0B4J245 112 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 A0A1W2PRD5 423 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 A0A1W2PRF3 423 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 A0A1W2PRM7 423 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 FAM90A27PA6NNH2 459 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 PRAC2D3DTV9 90 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 PRB4P10163 310 aaPredicted RBP7.7□□□□□ -1.18
COL17A1-203ENST00000393211 PLNP26678 52 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 IGFL4Q6B9Z1 124 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 NRACQ8N912 160 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 EEF1AKMT3Q96AZ1 226 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 METTL26Q96S19 204 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 FOXC2Q99958 501 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 AGPAT4-IT1Q9H0P7 198 aa7.7□□□□□ -1.18
COL17A1-203ENST00000393211 TRBV25-1A0A075B6N4 114 aa7.69□□□□□ -1.18
COL17A1-203ENST00000393211 A0A087WX48 190 aa7.69□□□□□ -1.18
COL17A1-203ENST00000393211 IGKV2D-26A0A0A0MRZ7 120 aa7.69□□□□□ -1.18
COL17A1-203ENST00000393211 IGHV7-4-1A0A0J9YVY3 117 aa7.69□□□□□ -1.18
COL17A1-203ENST00000393211 CLPSL1A2RUU4 121 aa7.69□□□□□ -1.18
COL17A1-203ENST00000393211 CLEC3BP05452 202 aa7.69□□□□□ -1.18
COL17A1-203ENST00000393211 GCSHP23434 173 aa7.69□□□□□ -1.18
COL17A1-203ENST00000393211 UBE2E1P51965 193 aa7.69□□□□□ -1.18
COL17A1-203ENST00000393211 CEND1Q8N111 149 aa7.69□□□□□ -1.18
COL17A1-203ENST00000393211 RP1L1Q8IWN7 2480 aaPredicted RBP7.69□□□□□ -1.18
COL17A1-203ENST00000393211 TRAV8-2A0A0B4J237 113 aa7.68□□□□□ -1.18
COL17A1-203ENST00000393211 TMEM8BA6NDV4 472 aa7.68□□□□□ -1.18
COL17A1-203ENST00000393211 SLC25A16P16260 332 aa7.68□□□□□ -1.18
COL17A1-203ENST00000393211 NBL1P41271 181 aa7.68□□□□□ -1.18
COL17A1-203ENST00000393211 ZC2HC1BQ5TFG8 222 aa7.68□□□□□ -1.18
COL17A1-203ENST00000393211 WFDC3Q8IUB2 231 aa7.68□□□□□ -1.18
COL17A1-203ENST00000393211 PHLDA1Q8WV24 401 aaPredicted RBP7.68□□□□□ -1.18
COL17A1-203ENST00000393211 RAB37Q96AX2 223 aa7.68□□□□□ -1.18
COL17A1-203ENST00000393211 LOC400499M0QZD8 3231 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 CCL21O00585 134 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 SAP30O75446 220 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 GAS8-AS1O95177 125 aa7.67□□□□□ -1.18
COL17A1-203ENST00000393211 FXYD2P54710 66 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms