RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 SMIM20Q8N5G0 67 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 C1orf159Q96HA4 380 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 C17orf77Q96MU5 243 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 BPESC1Q9GZL8 116 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 C15orf32Q32M92 178 aa8.37□□□□□ -1.07
CALD1-203ENST00000393118 SOX21Q9Y651 276 aaPredicted RBP8.37□□□□□ -1.07
CALD1-203ENST00000393118 A0A1W2PPM0 123 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 NPIPB5A8MRT5 1133 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 K7ERJ3 54 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 OR4X2Q8NGF9 303 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 C16orf92Q96LL3 132 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 METTL26Q96S19 204 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 NPFFR1Q9GZQ6 430 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 THAP8Q8NA92 274 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 MRPL16Q9NX20 251 aaKnown RBP8.36□□□□□ -1.07
CALD1-203ENST00000393118 TLN2Q9Y4G6 2542 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 IGHV3-11P01762 117 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 TMEM78Q5T7P6 136 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 BRD3OSQ6XYD6 125 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 ZFYVE26Q68DK2 2539 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 MYO9AB2RTY4 2548 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 CCDC168Q8NDH2 2452 aa8.36□□□□□ -1.07
CALD1-203ENST00000393118 GNLYP22749 145 aa8.35□□□□□ -1.07
CALD1-203ENST00000393118 LINC00574Q9H8X3 128 aa8.35□□□□□ -1.07
CALD1-203ENST00000393118 TMEM160Q9NX00 188 aa8.35□□□□□ -1.07
CALD1-203ENST00000393118 TET2Q6N021 2002 aaPredicted RBP8.35□□□□□ -1.07
CALD1-203ENST00000393118 SNCGO76070 127 aa8.35□□□□□ -1.07
CALD1-203ENST00000393118 IGLV1-47P01700 117 aa8.35□□□□□ -1.07
CALD1-203ENST00000393118 ATP5G2Q06055 141 aa8.35□□□□□ -1.07
CALD1-203ENST00000393118 H3BMG7 143 aa8.35□□□□□ -1.07
CALD1-203ENST00000393118 TRGV3P03979 118 aa8.35□□□□□ -1.07
CALD1-203ENST00000393118 RNF5Q99942 180 aa8.35□□□□□ -1.07
CALD1-203ENST00000393118 PSMB11A5LHX3 300 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 Q86TA4 180 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 SYT8Q8NBV8 401 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 IGHV1-24A0A0C4DH33 117 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 SPANXN1Q5VSR9 72 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 BOD1L2Q8IYS8 172 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 AKAP13Q12802 2813 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 IGKV1D-37A0A075B6S9 117 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 SMIM27A0A1W2PRY6 76 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 M0R1W7 72 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 SAA4P35542 130 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 SP5Q6BEB4 398 aaPredicted RBP8.34□□□□□ -1.07
CALD1-203ENST00000393118 TTC9CQ8N5M4 171 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 CHCHD1Q96BP2 118 aaKnown RBP8.34□□□□□ -1.07
CALD1-203ENST00000393118 SHANK2-AS3Q9BTD1 123 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 TRAV40A0A0B4J280 105 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.34□□□□□ -1.07
CALD1-203ENST00000393118 ZFAND6Q6FIF0 208 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 ZNF562Q6V9R5 426 aa8.34□□□□□ -1.07
CALD1-203ENST00000393118 K7EMI3 77 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 COX8AP10176 69 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 LINC00310P59036 64 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 C8orf31Q8N9H6 132 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 EEF1AKMT3Q96AZ1 226 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 TMEM238LA0A1B0GVL6 79 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 G3V318 75 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 IGKV1-17P01599 117 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 ARMS2P0C7Q2 107 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 EFNA4P52798 201 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 EMP1P54849 157 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 ADORA2A-AS1P86434 159 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 LYRM7Q5U5X0 104 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 USP9XQ93008 2570 aaPredicted RBP8.33□□□□□ -1.08
CALD1-203ENST00000393118 WFDC2Q14508 124 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 OR9G4Q8NGQ1 327 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 CCL19Q99731 98 aa8.33□□□□□ -1.08
CALD1-203ENST00000393118 SMIM17P0DL12 118 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 ATP5L2Q7Z4Y8 100 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 PRELID3AQ96N28 172 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 TRBV19A0A075B6N1 114 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 SMAD7O15105 426 aaKnown RBP8.32□□□□□ -1.08
CALD1-203ENST00000393118 NDPQ00604 133 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 PIMREGQ9BSJ6 248 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 C7orf69Q9H7B7 122 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 TRAV8-2A0A0B4J237 113 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 IGF2BP2-AS1Q96M15 143 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 ADGRG4Q8IZF6 3080 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 TEX22C9J3V5 150 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 ZNF491Q8N8L2 437 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 C8orf49Q96NF6 230 aa8.32□□□□□ -1.08
CALD1-203ENST00000393118 HERV-K104P63124 156 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 RUSC1-AS1Q66K80 236 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 SPATA12Q7Z6I5 190 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 ZNF502Q8TBZ5 544 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 SETD2Q9BYW2 2564 aaPredicted RBP8.31□□□□□ -1.08
CALD1-203ENST00000393118 K7EIM0 57 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 NCR2O95944 276 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 SCGB1A1P11684 91 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 LYZL1Q6UWQ5 148 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 FOXC2Q99958 501 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 KLK15Q9H2R5 256 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 ATP6V0E1O15342 81 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 GP9P14770 177 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 GAGE2BQ13066 116 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 GAGE2EQ4V326 116 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 FAM120AOSQ5T036 256 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 C1orf122Q6ZSJ8 110 aa8.31□□□□□ -1.08
CALD1-203ENST00000393118 FAM231DQ6ZW35 169 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms