RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SCN1AP35498 2009 aa1.71□□□□□ -2.14
PTPRC-205ENST00000391970 BAZ2BQ9UIF8 2168 aaKnown RBP1.71□□□□□ -2.14
PTPRC-205ENST00000391970 PTPRDP23468 1912 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 TRAV8-4A0A0B4J246 113 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 TRAV5A0A0B4J249 113 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 A8MT66 165 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 K7EN84 100 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 M0R2Z0 102 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 TRANK1O15050 2925 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF737O75373 536 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 CXorf1O96002 111 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 LHBP01229 141 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 P01737 135 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 MT-ATP8P03928 68 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 FGF6P10767 208 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 IFITM1P13164 125 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 NTF3P20783 257 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 IL3RAP26951 378 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 HLA-DMBP28068 263 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 OPRM1P35372 400 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 HINT1P49773 126 aaPredicted RBP1.7□□□□□ -2.14
PTPRC-205ENST00000391970 MTPNP58546 118 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 HIST1H4AP62805 103 aaKnown RBP1.7□□□□□ -2.14
PTPRC-205ENST00000391970 CATR1Q13166 79 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF141Q15928 474 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 BATFQ16520 125 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 TAL2Q16559 108 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 C4orf26Q17RF5 130 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 LUZP6Q538Z0 58 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF678Q5SXM1 525 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 MORN3Q6PF18 240 aaPredicted RBP1.7□□□□□ -2.14
PTPRC-205ENST00000391970 LCN15Q6UWW0 184 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 TMEM14EPQ6UXP3 125 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 SDIM1Q6ZPB5 146 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 GOLT1AQ6ZVE7 132 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 FANCMQ8IYD8 2048 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 LINC00471Q8N535 108 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 MIR7-3HGQ8N6C7 128 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 TEX29Q8N6K0 151 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 SLC25A29Q8N8R3 303 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 APCDD1LQ8NCL9 501 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 OR10AC1Q8NH08 325 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 OR10AG1Q8NH19 301 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 OR4K13Q8NH42 304 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 CLDND2Q8NHS1 167 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 JOSD2Q8TAC2 188 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 SLC25A44Q96H78 314 aaPredicted RBP1.7□□□□□ -2.14
PTPRC-205ENST00000391970 ABHD14BQ96IU4 210 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 PGLYRP3Q96LB9 341 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 MCEEQ96PE7 176 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 RTL8AQ9BWD3 113 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 KRTAP4-3Q9BYR4 195 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 SMIM3Q9BZL3 60 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 OR2H1Q9GZK4 316 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 C11orf1Q9H5F2 150 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 POMKQ9H5K3 350 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 HES4Q9HCC6 221 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 HIGD1BQ9P298 99 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 AK3Q9UIJ7 227 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 POLR1DQ9Y2S0 133 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 LSM5Q9Y4Y9 91 aaKnown RBP1.7□□□□□ -2.14
PTPRC-205ENST00000391970 CHCHD2Q9Y6H1 151 aaPredicted RBP1.7□□□□□ -2.14
PTPRC-205ENST00000391970 LTBP2Q14767 1821 aa1.7□□□□□ -2.14
PTPRC-205ENST00000391970 MGAMO43451 1857 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 NUP98P52948 1817 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 IGHV3OR16-8A0A075B7F1 116 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 TRBV7-6A0A0J9YX20 115 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 TEX50A0A1B0GTY4 177 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 DPRXA6NFQ7 191 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 C2orf70A6NJV1 201 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF705FA8MVS1 300 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-205ENST00000391970 J3QQQ9 107 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 J3QT63 122 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 ISLRO14498 428 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 GNGT2O14610 69 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 PGLYRP1O75594 196 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-205ENST00000391970 ARL6IP5O75915 188 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 RBP4P02753 201 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 SLC25A5P05141 298 aaKnown RBP1.69□□□□□ -2.14
PTPRC-205ENST00000391970 CECR9P0C854 216 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 C3orf79P0CE67 100 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 IGLC6P0CF74 106 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF705DP0CH99 300 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-205ENST00000391970 ZNF705BP0CI00 300 aaPredicted RBP1.69□□□□□ -2.14
PTPRC-205ENST00000391970 LINC00694P0DN24 101 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 COX8AP10176 69 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 BCL2P10415 239 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 FABP2P12104 132 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 COL8A2P25067 703 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 MPV17P39210 176 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 CCR2P41597 374 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 GALR1P47211 349 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 PPP1CAP62136 330 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 RPS24P62847 133 aaKnown RBP1.69□□□□□ -2.14
PTPRC-205ENST00000391970 PRDX1Q06830 199 aaKnown RBP1.69□□□□□ -2.14
PTPRC-205ENST00000391970 FUT5Q11128 374 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 MSMO1Q15800 293 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 MPV17LQ2QL34 196 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 Q499Y3 187 aa1.69□□□□□ -2.14
PTPRC-205ENST00000391970 MRPL2Q5T653 305 aaKnown RBP1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms