RNA–Protein interactions for RNA: ENST00000391046.1

RNU6-1300P-201, Transcript of RNA, U6 small nuclear 1300, pseudogene, humanhuman

BASIC

Gene RNU6-1300P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1300P-201ENST00000391046 CASC2Q6XLA1 102 aa0.88□□□□□ -2.27
RNU6-1300P-201ENST00000391046 OR10AC1Q8NH08 325 aa0.88□□□□□ -2.27
RNU6-1300P-201ENST00000391046 OR5AK2Q8NH90 309 aa0.88□□□□□ -2.27
RNU6-1300P-201ENST00000391046 LXNQ9BS40 222 aa0.88□□□□□ -2.27
RNU6-1300P-201ENST00000391046 LIMD2Q9BT23 127 aa0.88□□□□□ -2.27
RNU6-1300P-201ENST00000391046 BCL9O00512 1426 aa0.88□□□□□ -2.27
RNU6-1300P-201ENST00000391046 EML5Q05BV3 1969 aa0.87□□□□□ -2.27
RNU6-1300P-201ENST00000391046 NUP210Q8TEM1 1887 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1300P-201ENST00000391046 SNRNP200O75643 2136 aaKnown RBP0.87□□□□□ -2.27
RNU6-1300P-201ENST00000391046 TPT1P13693 172 aaKnown RBP0.87□□□□□ -2.27
RNU6-1300P-201ENST00000391046 TMEM128Q5BJH2 165 aa0.87□□□□□ -2.27
RNU6-1300P-201ENST00000391046 TEX29Q8N6K0 151 aa0.87□□□□□ -2.27
RNU6-1300P-201ENST00000391046 OR9Q1Q8NGQ5 310 aa0.87□□□□□ -2.27
RNU6-1300P-201ENST00000391046 TRAPPC2LQ9UL33 140 aa0.87□□□□□ -2.27
RNU6-1300P-201ENST00000391046 NDUFAF1Q9Y375 327 aa0.87□□□□□ -2.27
RNU6-1300P-201ENST00000391046 FAM135BQ49AJ0 1406 aa0.87□□□□□ -2.27
RNU6-1300P-201ENST00000391046 TET1Q8NFU7 2136 aa0.86□□□□□ -2.27
RNU6-1300P-201ENST00000391046 TRAV13-1A0A0B4J241 112 aa0.86□□□□□ -2.27
RNU6-1300P-201ENST00000391046 A0A0J9YY99 117 aa0.86□□□□□ -2.27
RNU6-1300P-201ENST00000391046 LOC107984640A0A0U1RRK4 108 aa0.86□□□□□ -2.27
RNU6-1300P-201ENST00000391046 PRORSD1PA6NEY8 169 aa0.86□□□□□ -2.27
RNU6-1300P-201ENST00000391046 SAA1P0DJI8 122 aaPredicted RBP0.86□□□□□ -2.27
RNU6-1300P-201ENST00000391046 OCIAD2Q56VL3 154 aa0.86□□□□□ -2.27
RNU6-1300P-201ENST00000391046 MORN4Q8NDC4 146 aa0.86□□□□□ -2.27
RNU6-1300P-201ENST00000391046 CCDC115Q96NT0 180 aa0.86□□□□□ -2.27
RNU6-1300P-201ENST00000391046 C3orf85A0A1B0GTC6 90 aa0.85□□□□□ -2.27
RNU6-1300P-201ENST00000391046 GNG14A0A1W2PPG7 69 aa0.85□□□□□ -2.27
RNU6-1300P-201ENST00000391046 H3BMG7 143 aa0.85□□□□□ -2.27
RNU6-1300P-201ENST00000391046 RPS3P23396 243 aaKnown RBP eCLIP0.85□□□□□ -2.27
RNU6-1300P-201ENST00000391046 S100GP29377 79 aa0.85□□□□□ -2.27
RNU6-1300P-201ENST00000391046 SRP9P49458 86 aaKnown RBP0.85□□□□□ -2.27
RNU6-1300P-201ENST00000391046 NEDD8Q15843 81 aa0.85□□□□□ -2.27
RNU6-1300P-201ENST00000391046 ASCC3Q8N3C0 2202 aaKnown RBP0.85□□□□□ -2.27
RNU6-1300P-201ENST00000391046 A2MP01023 1474 aa0.85□□□□□ -2.27
RNU6-1300P-201ENST00000391046 NOTCH1P46531 2555 aa0.85□□□□□ -2.27
RNU6-1300P-201ENST00000391046 USP54Q70EL1 1684 aa0.84□□□□□ -2.27
RNU6-1300P-201ENST00000391046 CHD3Q12873 2000 aaKnown RBP0.84□□□□□ -2.27
RNU6-1300P-201ENST00000391046 FBN2P35556 2912 aa0.84□□□□□ -2.27
RNU6-1300P-201ENST00000391046 PDE6GP18545 87 aa0.84□□□□□ -2.27
RNU6-1300P-201ENST00000391046 CIB3Q96Q77 187 aaPredicted RBP0.84□□□□□ -2.27
RNU6-1300P-201ENST00000391046 CBLN4Q9NTU7 201 aa0.84□□□□□ -2.27
RNU6-1300P-201ENST00000391046 FKBP11Q9NYL4 201 aa0.84□□□□□ -2.27
RNU6-1300P-201ENST00000391046 ZNF469Q96JG9 3925 aaPredicted RBP0.83□□□□□ -2.28
RNU6-1300P-201ENST00000391046 LOC107986453A0A1B0GWG9 222 aa0.83□□□□□ -2.28
RNU6-1300P-201ENST00000391046 CRYGSP22914 178 aa0.83□□□□□ -2.28
RNU6-1300P-201ENST00000391046 FOXA3P55318 350 aaPredicted RBP0.83□□□□□ -2.28
RNU6-1300P-201ENST00000391046 FXYD4P59646 89 aa0.83□□□□□ -2.28
RNU6-1300P-201ENST00000391046 RPL37AP61513 92 aaKnown RBP0.83□□□□□ -2.28
RNU6-1300P-201ENST00000391046 DR1Q01658 176 aa0.83□□□□□ -2.28
RNU6-1300P-201ENST00000391046 IZUMO2Q6UXV1 221 aa0.83□□□□□ -2.28
RNU6-1300P-201ENST00000391046 OR51A4Q8NGJ6 313 aa0.83□□□□□ -2.28
RNU6-1300P-201ENST00000391046 NABP2Q9BQ15 211 aa0.83□□□□□ -2.28
RNU6-1300P-201ENST00000391046 LPAR5Q9H1C0 372 aa0.83□□□□□ -2.28
RNU6-1300P-201ENST00000391046 BOKQ9UMX3 212 aaPredicted RBP0.83□□□□□ -2.28
RNU6-1300P-201ENST00000391046 MED12Q93074 2177 aa0.82□□□□□ -2.28
RNU6-1300P-201ENST00000391046 TSTD3H0UI37 97 aa0.82□□□□□ -2.28
RNU6-1300P-201ENST00000391046 M0QZK8 103 aa0.82□□□□□ -2.28
RNU6-1300P-201ENST00000391046 TAC4Q86UU9 113 aa0.82□□□□□ -2.28
RNU6-1300P-201ENST00000391046 TMEM35BQ8NCS4 154 aa0.82□□□□□ -2.28
RNU6-1300P-201ENST00000391046 NAT14Q8WUY8 206 aa0.82□□□□□ -2.28
RNU6-1300P-201ENST00000391046 SKA2Q8WVK7 121 aaPredicted RBP0.82□□□□□ -2.28
RNU6-1300P-201ENST00000391046 AHNAK2Q8IVF2 5795 aa0.82□□□□□ -2.28
RNU6-1300P-201ENST00000391046 FGD6Q6ZV73 1430 aa0.81□□□□□ -2.28
RNU6-1300P-201ENST00000391046 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.81□□□□□ -2.28
RNU6-1300P-201ENST00000391046 TRBV30A0A0K0K1B3 111 aa0.81□□□□□ -2.28
RNU6-1300P-201ENST00000391046 K7EIL1 84 aa0.81□□□□□ -2.28
RNU6-1300P-201ENST00000391046 NBEAP1P0C6P0 100 aa0.81□□□□□ -2.28
RNU6-1300P-201ENST00000391046 Q6ZQY7 126 aa0.81□□□□□ -2.28
RNU6-1300P-201ENST00000391046 BRK1Q8WUW1 75 aa0.81□□□□□ -2.28
RNU6-1300P-201ENST00000391046 AP1S3Q96PC3 154 aa0.81□□□□□ -2.28
RNU6-1300P-201ENST00000391046 GINS2Q9Y248 185 aa0.81□□□□□ -2.28
RNU6-1300P-201ENST00000391046 MPC1Q9Y5U8 109 aa0.81□□□□□ -2.28
RNU6-1300P-201ENST00000391046 ZFC3H1O60293 1989 aaKnown RBP0.81□□□□□ -2.28
RNU6-1300P-201ENST00000391046 CITO14578 2027 aa0.81□□□□□ -2.28
RNU6-1300P-201ENST00000391046 A6NN06 94 aa0.8□□□□□ -2.28
RNU6-1300P-201ENST00000391046 ZNF727A8MUV8 499 aa0.8□□□□□ -2.28
RNU6-1300P-201ENST00000391046 IGHV3-30P01768 117 aa0.8□□□□□ -2.28
RNU6-1300P-201ENST00000391046 IGHV3-30-5P0DP03 117 aa0.8□□□□□ -2.28
RNU6-1300P-201ENST00000391046 RPL22P35268 128 aaKnown RBP0.8□□□□□ -2.28
RNU6-1300P-201ENST00000391046 AKAP14Q86UN6 197 aa0.8□□□□□ -2.28
RNU6-1300P-201ENST00000391046 C10orf111Q8N326 155 aa0.8□□□□□ -2.28
RNU6-1300P-201ENST00000391046 TCTEX1D1Q8N7M0 179 aa0.8□□□□□ -2.28
RNU6-1300P-201ENST00000391046 C5orf17Q8NAS9 161 aa0.8□□□□□ -2.28
RNU6-1300P-201ENST00000391046 OR5A2Q8NGI9 324 aa0.8□□□□□ -2.28
RNU6-1300P-201ENST00000391046 ANKRD30AQ9BXX3 1397 aa0.8□□□□□ -2.28
RNU6-1300P-201ENST00000391046 PTPRDP23468 1912 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 FANCMQ8IYD8 2048 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 LOC107984156A0A0G2JMH3 177 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 NUPR2A6NF83 97 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 ARL5CA6NH57 179 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 J3KT08 172 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 SULT1C4O75897 302 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 PRB4P10163 310 aaPredicted RBP0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 SLC25A4P12235 298 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 CCL4P13236 92 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 DNAJB13P59910 316 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 BLCAPP62952 87 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 CCSMST1Q4G0I0 132 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 ARL17AQ8IVW1 177 aa0.79□□□□□ -2.28
RNU6-1300P-201ENST00000391046 TMEM229BQ8NBD8 167 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms