RNA–Protein interactions for RNA: ENST00000389212.7

RAPGEF3-201, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RAPGEF3, Length 3,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-201ENST00000389212 MBD6Q96DN6 1003 aa9.25□□□□□ -0.93
RAPGEF3-201ENST00000389212 TRGV9Q99603 122 aa9.25□□□□□ -0.93
RAPGEF3-201ENST00000389212 VKORC1Q9BQB6 163 aa9.25□□□□□ -0.93
RAPGEF3-201ENST00000389212 GP9P14770 177 aa9.25□□□□□ -0.93
RAPGEF3-201ENST00000389212 GAGE13Q4V321 117 aa9.25□□□□□ -0.93
RAPGEF3-201ENST00000389212 PRTN3P24158 256 aa9.25□□□□□ -0.93
RAPGEF3-201ENST00000389212 HES1Q14469 280 aa9.25□□□□□ -0.93
RAPGEF3-201ENST00000389212 BCL6BQ8N143 479 aaPredicted RBP9.25□□□□□ -0.93
RAPGEF3-201ENST00000389212 CIARTQ8N365 385 aaPredicted RBP9.25□□□□□ -0.93
RAPGEF3-201ENST00000389212 GRAMD2BQ96HH9 432 aa9.25□□□□□ -0.93
RAPGEF3-201ENST00000389212 PGLYRP4Q96LB8 373 aa9.25□□□□□ -0.93
RAPGEF3-201ENST00000389212 C7orf69Q9H7B7 122 aa9.25□□□□□ -0.93
RAPGEF3-201ENST00000389212 PPDPFQ9H3Y8 114 aa9.24□□□□□ -0.93
RAPGEF3-201ENST00000389212 SPANXB1Q9NS25 103 aaPredicted RBP9.24□□□□□ -0.93
RAPGEF3-201ENST00000389212 HIGD1AQ9Y241 93 aa9.24□□□□□ -0.93
RAPGEF3-201ENST00000389212 TNFRSF18Q9Y5U5 241 aa9.24□□□□□ -0.93
RAPGEF3-201ENST00000389212 GAGE12JA6NER3 117 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 H3BVH4 76 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 GAGE7O76087 117 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 GAGE12FP0CL80 117 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 GAGE12GP0CL81 117 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 GAGE12IP0CL82 117 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 COX8AP10176 69 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 GAGE4Q13068 117 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 GOLT1AQ6ZVE7 132 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 PRNTQ86SH4 94 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 IGHV3-23P01764 117 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 TCRAP04437 139 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 C8orf46Q8TAG6 207 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 GPR82Q96P67 336 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 RASL11BQ9BPW5 248 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 SLC25A39Q9BZJ4 359 aaPredicted RBP9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 MRPL23Q16540 153 aaKnown RBP9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 WFDC3Q8IUB2 231 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 GTSF1Q8WW33 167 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 SPATA25Q9BR10 227 aa9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 COL25A1Q9BXS0 654 aaPredicted RBP9.23□□□□□ -0.93
RAPGEF3-201ENST00000389212 CCDC179H3BU77 68 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 I3L2K1 104 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 TGFAP01135 160 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 IGKV1-17P01599 117 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 FXYD7P58549 80 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 RAXQ9Y2V3 346 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 C2orf91Q6ZV80 131 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 FAM231DQ6ZW35 169 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 C1RLQ9NZP8 487 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 COL12A1Q99715 3063 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 HIVEP3Q5T1R4 2406 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 IGHV3OR16-8A0A075B7F1 116 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 P01737 135 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 RAB1BQ9H0U4 201 aa9.22□□□□□ -0.93
RAPGEF3-201ENST00000389212 IGHV1-24A0A0C4DH33 117 aa9.21□□□□□ -0.93
RAPGEF3-201ENST00000389212 XGP55808 180 aa9.21□□□□□ -0.93
RAPGEF3-201ENST00000389212 MLST8Q9BVC4 326 aa9.21□□□□□ -0.93
RAPGEF3-201ENST00000389212 MS4A6AQ9H2W1 248 aa9.21□□□□□ -0.93
RAPGEF3-201ENST00000389212 RPP21Q9H633 154 aaKnown RBP9.21□□□□□ -0.93
RAPGEF3-201ENST00000389212 A4D1N5 150 aa9.21□□□□□ -0.94
RAPGEF3-201ENST00000389212 K7EIM0 57 aa9.21□□□□□ -0.94
RAPGEF3-201ENST00000389212 PRELID3AQ96N28 172 aa9.21□□□□□ -0.94
RAPGEF3-201ENST00000389212 VCX2Q9H322 139 aa9.21□□□□□ -0.94
RAPGEF3-201ENST00000389212 IGHV3-35A0A0C4DH35 117 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 M0R3E3 92 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 NDUFS7O75251 213 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 IL4P05112 153 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 PVRIGQ6DKI7 326 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 DAZAP1Q96EP5 407 aaKnown RBP9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 TPPP3Q9BW30 176 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 LOC107984156A0A0G2JMH3 177 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 LOC389332A0A1B0GUA5 103 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 A8MWL6 223 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 LY6LH3BQJ8 138 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 PCP2Q8IVA1 136 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 ARL17AQ8IVW1 177 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 PRSS3P2Q8NHM4 247 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 SPXQ9BT56 116 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 TTTY13Q9BZ97 58 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 KLF12Q9Y4X4 402 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 NCBP2LA6PVI3 153 aaKnown RBP9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 F8W1H4 67 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 COL8A1P27658 744 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 ADORA2A-AS1P86434 159 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 DYNAPQ8N1N2 210 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 KIR2DL4Q99706 377 aa9.2□□□□□ -0.94
RAPGEF3-201ENST00000389212 TMEM189A5PLL7 270 aa9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 LTAP01374 205 aa9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 Q6ZUT4 128 aa9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 Q86TA4 180 aa9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 SOX21Q9Y651 276 aaPredicted RBP9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 NBR2O15453 112 aa9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 CT45A10P0DMU9 189 aa9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 FXYD2P54710 66 aa9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 GAGE2BQ13066 116 aa9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 GAGE2EQ4V326 116 aa9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 DPM3Q9P2X0 92 aa9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 GAGE2DQ9UEU5 116 aa9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 ZFHX3Q15911 3703 aa9.19□□□□□ -0.94
RAPGEF3-201ENST00000389212 HBBP68871 147 aa9.18□□□□□ -0.94
RAPGEF3-201ENST00000389212 NDPQ00604 133 aa9.18□□□□□ -0.94
RAPGEF3-201ENST00000389212 WIPF2Q8TF74 440 aaPredicted RBP9.18□□□□□ -0.94
RAPGEF3-201ENST00000389212 PTH2Q96A98 100 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms