RNA–Protein interactions for RNA: ENST00000382519.8

CD9-204, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-204ENST00000382519 RPL12P30050 165 aaKnown RBP12.81□□□□□ -0.36
CD9-204ENST00000382519 LINC00336Q6ZUF6 198 aa12.81□□□□□ -0.36
CD9-204ENST00000382519 ATG101Q9BSB4 218 aa12.81□□□□□ -0.36
CD9-204ENST00000382519 C7orf71A4D174 169 aa12.8□□□□□ -0.36
CD9-204ENST00000382519 FFAR4Q5NUL3 377 aa12.8□□□□□ -0.36
CD9-204ENST00000382519 SCGB1C1Q8TD33 95 aa12.8□□□□□ -0.36
CD9-204ENST00000382519 FXYD5Q96DB9 178 aa12.8□□□□□ -0.36
CD9-204ENST00000382519 LINC00477Q96M19 166 aa12.8□□□□□ -0.36
CD9-204ENST00000382519 PYGO2Q9BRQ0 406 aa12.8□□□□□ -0.36
CD9-204ENST00000382519 AGPAT4-IT1Q9H0P7 198 aa12.8□□□□□ -0.36
CD9-204ENST00000382519 GAGE12BA1L429 117 aa12.79□□□□□ -0.36
CD9-204ENST00000382519 GAGE7O76087 117 aa12.79□□□□□ -0.36
CD9-204ENST00000382519 GAGE12FP0CL80 117 aa12.79□□□□□ -0.36
CD9-204ENST00000382519 GAGE12GP0CL81 117 aa12.79□□□□□ -0.36
CD9-204ENST00000382519 GAGE12IP0CL82 117 aa12.79□□□□□ -0.36
CD9-204ENST00000382519 BTN1A1Q13410 526 aa12.79□□□□□ -0.36
CD9-204ENST00000382519 LGALS9BQ3B8N2 356 aa12.79□□□□□ -0.36
CD9-204ENST00000382519 TMEM78Q5T7P6 136 aa12.79□□□□□ -0.36
CD9-204ENST00000382519 RNF141Q8WVD5 230 aa12.79□□□□□ -0.36
CD9-204ENST00000382519 PHYHIPLQ96FC7 376 aa12.79□□□□□ -0.36
CD9-204ENST00000382519 KLLNB2CW77 178 aa12.78□□□□□ -0.36
CD9-204ENST00000382519 GPX1P07203 203 aa12.78□□□□□ -0.36
CD9-204ENST00000382519 RNASE4P34096 147 aaKnown RBP12.78□□□□□ -0.36
CD9-204ENST00000382519 UBE2L3P68036 154 aaKnown RBP12.78□□□□□ -0.36
CD9-204ENST00000382519 CD300CQ08708 224 aa12.78□□□□□ -0.36
CD9-204ENST00000382519 C9orf47Q6ZRZ4 202 aa12.78□□□□□ -0.36
CD9-204ENST00000382519 ALG5Q9Y673 324 aa12.78□□□□□ -0.36
CD9-204ENST00000382519 OR5I1Q13606 314 aa12.77□□□□□ -0.37
CD9-204ENST00000382519 KHDC3LQ587J8 217 aa12.77□□□□□ -0.37
CD9-204ENST00000382519 LINC00612Q8N6U2 182 aa12.77□□□□□ -0.37
CD9-204ENST00000382519 FAM19A4Q96LR4 140 aa12.77□□□□□ -0.37
CD9-204ENST00000382519 VGLL1Q99990 258 aa12.77□□□□□ -0.37
CD9-204ENST00000382519 RTL8CO15255 209 aa12.76□□□□□ -0.37
CD9-204ENST00000382519 CSN1S1P47710 185 aa12.76□□□□□ -0.37
CD9-204ENST00000382519 ZNF680Q8NEM1 530 aa12.76□□□□□ -0.37
CD9-204ENST00000382519 PRSS29PA6NIE9 313 aa12.75□□□□□ -0.37
CD9-204ENST00000382519 CRISP2P16562 243 aa12.75□□□□□ -0.37
CD9-204ENST00000382519 FAM3BP58499 235 aaPredicted RBP12.75□□□□□ -0.37
CD9-204ENST00000382519 TAS2R45P59539 299 aa12.75□□□□□ -0.37
CD9-204ENST00000382519 RANP62826 216 aaKnown RBP12.75□□□□□ -0.37
CD9-204ENST00000382519 Q6ZR54 194 aa12.75□□□□□ -0.37
CD9-204ENST00000382519 EIF4E3Q8N5X7 224 aaKnown RBP12.75□□□□□ -0.37
CD9-204ENST00000382519 Q8TAT8 98 aa12.75□□□□□ -0.37
CD9-204ENST00000382519 ZNF503Q96F45 646 aa12.75□□□□□ -0.37
CD9-204ENST00000382519 Q9H3A6 140 aa12.75□□□□□ -0.37
CD9-204ENST00000382519 WFDC1Q9HC57 220 aa12.75□□□□□ -0.37
CD9-204ENST00000382519 GSN-AS1Q9NRJ2 163 aa12.75□□□□□ -0.37
CD9-204ENST00000382519 HECTD4Q9Y4D8 3996 aa12.75□□□□□ -0.37
CD9-204ENST00000382519 TRAV26-1A0A087WT03 109 aa12.74□□□□□ -0.37
CD9-204ENST00000382519 RGS13O14921 159 aa12.74□□□□□ -0.37
CD9-204ENST00000382519 ZNF324O75467 553 aaPredicted RBP12.74□□□□□ -0.37
CD9-204ENST00000382519 EIF3GO75821 320 aaKnown RBP eCLIP12.74□□□□□ -0.37
CD9-204ENST00000382519 PTTG1O95997 202 aa12.74□□□□□ -0.37
CD9-204ENST00000382519 CCL18P55774 89 aa12.74□□□□□ -0.37
CD9-204ENST00000382519 DAZ2Q13117 558 aaKnown RBP12.74□□□□□ -0.37
CD9-204ENST00000382519 PRR9Q5T870 116 aa12.74□□□□□ -0.37
CD9-204ENST00000382519 Q6ZTI0 123 aa12.74□□□□□ -0.37
CD9-204ENST00000382519 ZFAND2AQ8N6M9 145 aa12.74□□□□□ -0.37
CD9-204ENST00000382519 GNPNAT1Q96EK6 184 aaPredicted RBP12.74□□□□□ -0.37
CD9-204ENST00000382519 TMPRSS5Q9H3S3 457 aa12.74□□□□□ -0.37
CD9-204ENST00000382519 ZNF492Q9P255 531 aa12.74□□□□□ -0.37
CD9-204ENST00000382519 A0A0J9YY99 117 aa12.73□□□□□ -0.37
CD9-204ENST00000382519 NMBP08949 121 aa12.73□□□□□ -0.37
CD9-204ENST00000382519 M6PRP20645 277 aa12.73□□□□□ -0.37
CD9-204ENST00000382519 ZNF138P52744 262 aa12.73□□□□□ -0.37
CD9-204ENST00000382519 SOHLH1Q5JUK2 328 aa12.73□□□□□ -0.37
CD9-204ENST00000382519 C11orf72Q8NBR9 251 aa12.73□□□□□ -0.37
CD9-204ENST00000382519 LINC00467Q9BRT7 94 aa12.73□□□□□ -0.37
CD9-204ENST00000382519 TRGV2A0A075B6R0 118 aa12.72□□□□□ -0.37
CD9-204ENST00000382519 HOXA5P20719 270 aa12.72□□□□□ -0.37
CD9-204ENST00000382519 ACOT6Q3I5F7 207 aaPredicted RBP12.72□□□□□ -0.37
CD9-204ENST00000382519 ANXA2RQ3ZCQ2 193 aa12.72□□□□□ -0.37
CD9-204ENST00000382519 LYPD1Q8N2G4 141 aa12.72□□□□□ -0.37
CD9-204ENST00000382519 MED28Q9H204 178 aa12.72□□□□□ -0.37
CD9-204ENST00000382519 TRGV1A0A0A0MS02 117 aa12.71□□□□□ -0.37
CD9-204ENST00000382519 A0A1W2PPV4 95 aa12.71□□□□□ -0.37
CD9-204ENST00000382519 RAB2AP61019 212 aa12.71□□□□□ -0.37
CD9-204ENST00000382519 HYLS1Q96M11 299 aa12.71□□□□□ -0.37
CD9-204ENST00000382519 ARPC5LQ9BPX5 153 aa12.71□□□□□ -0.37
CD9-204ENST00000382519 RPH3ALQ9UNE2 315 aa12.71□□□□□ -0.37
CD9-204ENST00000382519 IGHV1OR15-1A0A075B7D0 117 aa12.7□□□□□ -0.38
CD9-204ENST00000382519 A0A1B0GVY2 172 aa12.7□□□□□ -0.38
CD9-204ENST00000382519 RBAKDNA6NC62 111 aa12.7□□□□□ -0.38
CD9-204ENST00000382519 C1orf134Q5TEV5 83 aa12.7□□□□□ -0.38
CD9-204ENST00000382519 Q6ZQT7 251 aa12.7□□□□□ -0.38
CD9-204ENST00000382519 ZNRF2Q8NHG8 242 aa12.7□□□□□ -0.38
CD9-204ENST00000382519 RXFP4Q8TDU9 374 aa12.7□□□□□ -0.38
CD9-204ENST00000382519 TP53TG3Q9ULZ0 132 aa12.7□□□□□ -0.38
CD9-204ENST00000382519 LINC00588Q9Y4M8 146 aa12.7□□□□□ -0.38
CD9-204ENST00000382519 KLF12Q9Y4X4 402 aa12.7□□□□□ -0.38
CD9-204ENST00000382519 TRBV7-9A0A0J9YWB2 115 aa12.69□□□□□ -0.38
CD9-204ENST00000382519 DIRC3C9JPN6 131 aa12.69□□□□□ -0.38
CD9-204ENST00000382519 TCL1AP56279 114 aa12.69□□□□□ -0.38
CD9-204ENST00000382519 SSX7Q7RTT5 188 aa12.69□□□□□ -0.38
CD9-204ENST00000382519 CMTM2Q8TAZ6 248 aa12.69□□□□□ -0.38
CD9-204ENST00000382519 OTORQ9NRC9 128 aa12.69□□□□□ -0.38
CD9-204ENST00000382519 NBDYA0A0U1RRE5 68 aa12.68□□□□□ -0.38
CD9-204ENST00000382519 HMGB3O15347 200 aaKnown RBP12.68□□□□□ -0.38
CD9-204ENST00000382519 ZNF266Q14584 549 aa12.68□□□□□ -0.38
CD9-204ENST00000382519 IBA57Q5T440 356 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms