RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 PRELID1Q9Y255 219 aa6.67□□□□□ -1.34
HMGN1-202ENST00000380747 HMGB3O15347 200 aaKnown RBP6.66□□□□□ -1.34
HMGN1-202ENST00000380747 PLA2G1BP04054 148 aaKnown RBP6.66□□□□□ -1.34
HMGN1-202ENST00000380747 CDC34P49427 236 aaPredicted RBP6.66□□□□□ -1.34
HMGN1-202ENST00000380747 EMP1P54849 157 aa6.66□□□□□ -1.34
HMGN1-202ENST00000380747 RANP62826 216 aaKnown RBP6.66□□□□□ -1.34
HMGN1-202ENST00000380747 ERCC8Q13216 396 aa6.66□□□□□ -1.34
HMGN1-202ENST00000380747 ODF1Q14990 250 aa6.66□□□□□ -1.34
HMGN1-202ENST00000380747 TOR2AQ5JU69 321 aa6.66□□□□□ -1.34
HMGN1-202ENST00000380747 RPP25LQ8N5L8 163 aaKnown RBP6.66□□□□□ -1.34
HMGN1-202ENST00000380747 OR2G3Q8NGZ4 309 aa6.66□□□□□ -1.34
HMGN1-202ENST00000380747 GNPNAT1Q96EK6 184 aaPredicted RBP6.66□□□□□ -1.34
HMGN1-202ENST00000380747 MRPL53Q96EL3 112 aaKnown RBP6.66□□□□□ -1.34
HMGN1-202ENST00000380747 ZNF503Q96F45 646 aa6.66□□□□□ -1.34
HMGN1-202ENST00000380747 PHYHIPLQ96FC7 376 aa6.66□□□□□ -1.34
HMGN1-202ENST00000380747 NEU1Q99519 415 aa6.66□□□□□ -1.34
HMGN1-202ENST00000380747 SMIM9A6NGZ8 99 aa6.65□□□□□ -1.34
HMGN1-202ENST00000380747 NPIPB6E9PJ23 425 aa6.65□□□□□ -1.34
HMGN1-202ENST00000380747 J3KRW8 73 aa6.65□□□□□ -1.34
HMGN1-202ENST00000380747 TAAR5O14804 337 aa6.65□□□□□ -1.34
HMGN1-202ENST00000380747 CRXO43186 299 aaPredicted RBP6.65□□□□□ -1.34
HMGN1-202ENST00000380747 HBE1P02100 147 aa6.65□□□□□ -1.34
HMGN1-202ENST00000380747 MBP02144 154 aa6.65□□□□□ -1.34
HMGN1-202ENST00000380747 TSPOP30536 169 aa6.65□□□□□ -1.34
HMGN1-202ENST00000380747 LEPP41159 167 aa6.65□□□□□ -1.34
HMGN1-202ENST00000380747 CDKN1BP46527 198 aa6.65□□□□□ -1.34
HMGN1-202ENST00000380747 SERF2P84101 59 aa6.65□□□□□ -1.34
HMGN1-202ENST00000380747 RRN3P1Q2M238 152 aa6.65□□□□□ -1.34
HMGN1-202ENST00000380747 KIAA1109Q2LD37 5005 aa6.65□□□□□ -1.35
HMGN1-202ENST00000380747 IGKV2-40A0A087WW87 121 aaPredicted RBP6.64□□□□□ -1.35
HMGN1-202ENST00000380747 LOC102723971A0A1B0GUV8 181 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 NUPR2A6NF83 97 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 ZNF705GA8MUZ8 300 aaPredicted RBP6.64□□□□□ -1.35
HMGN1-202ENST00000380747 IGKV2D-40P01614 121 aaPredicted RBP6.64□□□□□ -1.35
HMGN1-202ENST00000380747 CT45A10P0DMU9 189 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 CSN1S1P47710 185 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 CEMP1Q6PRD7 247 aaPredicted RBP6.64□□□□□ -1.35
HMGN1-202ENST00000380747 Q6ZNX1 250 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 PQLC2Q6ZP29 291 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 KCNRGQ8N5I3 272 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 OR11H4Q8NGC9 324 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 PHLDA1Q8WV24 401 aaPredicted RBP6.64□□□□□ -1.35
HMGN1-202ENST00000380747 RAB24Q969Q5 203 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 HYLS1Q96M11 299 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 LINC01587Q99440 93 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 ARPC5LQ9BPX5 153 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 ACTR3CQ9C0K3 210 aaPredicted RBP6.64□□□□□ -1.35
HMGN1-202ENST00000380747 Q9H3A6 140 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 CYTL1Q9NRR1 136 aa6.64□□□□□ -1.35
HMGN1-202ENST00000380747 TMEM189A5PLL7 270 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 ARL14EPLP0DKL9 152 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 HTN1P15515 57 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 ZNF345Q14585 488 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 AKR1C8PQ5T2L2 129 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 TMEM78Q5T7P6 136 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 ZNF767PQ75MW2 155 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 IQCF2Q8IXL9 164 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 LYPD1Q8N2G4 141 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 CMTM2Q8TAZ6 248 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 LINC00477Q96M19 166 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 AGPAT4-IT1Q9H0P7 198 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 RPH3ALQ9UNE2 315 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 CELA1Q9UNI1 258 aa6.63□□□□□ -1.35
HMGN1-202ENST00000380747 KLK5Q9Y337 293 aaPredicted RBP6.63□□□□□ -1.35
HMGN1-202ENST00000380747 TRAV12-3A0A0B4J271 114 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 A0A0D9SG52 128 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 KANTRA0A1W2PQU2 76 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 PGPA6NDG6 321 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 HMSDA8MTL9 139 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 PFDN1O60925 122 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 PRM2P04554 102 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 STAG3L2P0CL84 134 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 STAG3L3P0CL85 134 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 GCHFRP30047 84 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 FAM74A1Q5RGS3 127 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 GFI1BQ5VTD9 330 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 Q6ZTC4 211 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 TMEM256Q8N2U0 113 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 RXFP4Q8TDU9 374 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 ODF3Q96PU9 254 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 VGLL1Q99990 258 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 ZNF471Q9BX82 626 aaPredicted RBP6.62□□□□□ -1.35
HMGN1-202ENST00000380747 OTORQ9NRC9 128 aa6.62□□□□□ -1.35
HMGN1-202ENST00000380747 YTHDF2Q9Y5A9 579 aaKnown RBP6.62□□□□□ -1.35
HMGN1-202ENST00000380747 DIRC3C9JPN6 131 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 BCL2L11O43521 198 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 CXorf1O96002 111 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 SPART-AS1P0CW21 52 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 MED14OSP0DP75 135 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 AZU1P20160 251 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 ZNF138P52744 262 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 TAS2R60P59551 318 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 C12orf74Q32Q52 190 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 FAM222AQ5U5X8 452 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 C9orf47Q6ZRZ4 202 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 TMUB2Q71RG4 321 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 SSX7Q7RTT5 188 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 Q8TAT8 98 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 ST6GAL2Q96JF0 529 aa6.61□□□□□ -1.35
HMGN1-202ENST00000380747 C20orf144Q9BQM9 153 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms