RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 IGHV3-23P01764 117 aa9.58□□□□□ -0.88
HERC6-203ENST00000380265 ZNF474Q6S9Z5 364 aaPredicted RBP9.58□□□□□ -0.88
HERC6-203ENST00000380265 CYSLTR1Q9Y271 337 aa9.58□□□□□ -0.88
HERC6-203ENST00000380265 SONP18583 2426 aaKnown RBP9.58□□□□□ -0.88
HERC6-203ENST00000380265 SYT8Q8NBV8 401 aa9.57□□□□□ -0.88
HERC6-203ENST00000380265 E9PLD3 99 aa9.57□□□□□ -0.88
HERC6-203ENST00000380265 IGHG3P01860 377 aa9.57□□□□□ -0.88
HERC6-203ENST00000380265 WT1P19544 449 aaPredicted RBP9.57□□□□□ -0.88
HERC6-203ENST00000380265 MRPL16Q9NX20 251 aaKnown RBP9.57□□□□□ -0.88
HERC6-203ENST00000380265 HIGD1BQ9P298 99 aa9.57□□□□□ -0.88
HERC6-203ENST00000380265 ANKRD11Q6UB99 2663 aaPredicted RBP9.57□□□□□ -0.88
HERC6-203ENST00000380265 ZNF462Q96JM2 2506 aa9.57□□□□□ -0.88
HERC6-203ENST00000380265 IGLV3-9A0A075B6K5 115 aa9.57□□□□□ -0.88
HERC6-203ENST00000380265 TRAV17A0A0B4J275 112 aa9.57□□□□□ -0.88
HERC6-203ENST00000380265 MAPKAPK5-AS1Q8N8E1 139 aa9.57□□□□□ -0.88
HERC6-203ENST00000380265 LINC00574Q9H8X3 128 aa9.57□□□□□ -0.88
HERC6-203ENST00000380265 ZFHX4Q86UP3 3567 aa9.56□□□□□ -0.88
HERC6-203ENST00000380265 DCHS1Q96JQ0 3298 aa9.56□□□□□ -0.88
HERC6-203ENST00000380265 TGFAP01135 160 aa9.56□□□□□ -0.88
HERC6-203ENST00000380265 SPINK8P0C7L1 97 aa9.56□□□□□ -0.88
HERC6-203ENST00000380265 NXT2Q9NPJ8 142 aaKnown RBP9.56□□□□□ -0.88
HERC6-203ENST00000380265 OVOL3O00110 214 aa9.56□□□□□ -0.88
HERC6-203ENST00000380265 HHLA3Q9XRX5 114 aa9.56□□□□□ -0.88
HERC6-203ENST00000380265 ATP5LO75964 103 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 HES1Q14469 280 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 SCGB1D4Q6XE38 83 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 MRAP2Q96G30 205 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 DYNLRB1Q9NP97 96 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 U3KQK5 164 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 H3BRN7 92 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 PRRG2O14669 202 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 PSMB2P49721 201 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 OR11H12B2RN74 326 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 CD40P25942 277 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 HLA-DMBP28068 263 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 ZNF491Q8N8L2 437 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 OR11H1Q8NG94 326 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 OR11H2Q8NH07 326 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 PGPEP1Q9NXJ5 209 aa9.55□□□□□ -0.88
HERC6-203ENST00000380265 FLNBO75369 2602 aaKnown RBP9.55□□□□□ -0.88
HERC6-203ENST00000380265 H3BVH4 76 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 EFNA4P52798 201 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 SRSF9Q13242 221 aaKnown RBP eCLIP9.54□□□□□ -0.88
HERC6-203ENST00000380265 PHLDA1Q8WV24 401 aaPredicted RBP9.54□□□□□ -0.88
HERC6-203ENST00000380265 PRR25Q96S07 402 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 LOC400499M0QZD8 3231 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 ASPMQ8IZT6 3477 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 CSPG4Q6UVK1 2322 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 IGHV1-8P0DP01 117 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 TEX36Q5VZQ5 186 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 LYPD1Q8N2G4 141 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 GATD1Q8NB37 220 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 IGFBPL1Q8WX77 278 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 TM2D2Q9BX73 214 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 DKK4Q9UBT3 224 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 TRAV26-2A0A0B4J265 109 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 ZNF80P51504 273 aaPredicted RBP9.54□□□□□ -0.88
HERC6-203ENST00000380265 RRN3P1Q2M238 152 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 SPATA25Q9BR10 227 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 SMPXQ9UHP9 88 aa9.54□□□□□ -0.88
HERC6-203ENST00000380265 RAI1Q7Z5J4 1906 aaPredicted RBP9.54□□□□□ -0.88
HERC6-203ENST00000380265 I3L2K1 104 aa9.53□□□□□ -0.88
HERC6-203ENST00000380265 K7EM74 188 aa9.53□□□□□ -0.88
HERC6-203ENST00000380265 HOXB4P17483 251 aaPredicted RBP9.53□□□□□ -0.88
HERC6-203ENST00000380265 C22orf34Q6ZV56 151 aa9.53□□□□□ -0.88
HERC6-203ENST00000380265 C17orf100A8MU93 164 aa9.53□□□□□ -0.88
HERC6-203ENST00000380265 C16orf97H3BN30 126 aa9.53□□□□□ -0.88
HERC6-203ENST00000380265 HOXA3O43365 443 aaPredicted RBP9.53□□□□□ -0.88
HERC6-203ENST00000380265 ANXA2RQ3ZCQ2 193 aa9.53□□□□□ -0.88
HERC6-203ENST00000380265 PSMG4Q5JS54 123 aa9.53□□□□□ -0.88
HERC6-203ENST00000380265 TRBV6-1A0A0K0K1D8 114 aa9.53□□□□□ -0.88
HERC6-203ENST00000380265 TEX22C9J3V5 150 aa9.53□□□□□ -0.88
HERC6-203ENST00000380265 C1orf210Q8IVY1 113 aa9.53□□□□□ -0.88
HERC6-203ENST00000380265 SVIPQ8NHG7 77 aa9.53□□□□□ -0.88
HERC6-203ENST00000380265 ERCC8Q13216 396 aa9.52□□□□□ -0.88
HERC6-203ENST00000380265 MRGPRG-AS1Q2M3A8 158 aa9.52□□□□□ -0.88
HERC6-203ENST00000380265 DEFB109BQ30KR1 87 aa9.52□□□□□ -0.88
HERC6-203ENST00000380265 PVRIGQ6DKI7 326 aa9.52□□□□□ -0.88
HERC6-203ENST00000380265 GLMPQ8WWB7 406 aa9.52□□□□□ -0.88
HERC6-203ENST00000380265 HIF1ANQ9NWT6 349 aa9.52□□□□□ -0.88
HERC6-203ENST00000380265 IGHV1-3A0A0C4DH29 117 aa9.52□□□□□ -0.89
HERC6-203ENST00000380265 ARL3P36405 182 aa9.52□□□□□ -0.89
HERC6-203ENST00000380265 ZNF502Q8TBZ5 544 aa9.52□□□□□ -0.89
HERC6-203ENST00000380265 CTSZQ9UBR2 303 aa9.52□□□□□ -0.89
HERC6-203ENST00000380265 TLN1Q9Y490 2541 aaKnown RBP9.52□□□□□ -0.89
HERC6-203ENST00000380265 IGHV3OR16-13A0A075B7E8 117 aa9.52□□□□□ -0.89
HERC6-203ENST00000380265 IGHV3-74A0A0B4J1X5 117 aa9.52□□□□□ -0.89
HERC6-203ENST00000380265 SEM1Q6ZVN7 128 aa9.52□□□□□ -0.89
HERC6-203ENST00000380265 PRSS33Q8NF86 280 aa9.52□□□□□ -0.89
HERC6-203ENST00000380265 J3KRW8 73 aa9.51□□□□□ -0.89
HERC6-203ENST00000380265 LOXP28300 417 aaPredicted RBP9.51□□□□□ -0.89
HERC6-203ENST00000380265 DTX2Q86UW9 622 aa9.51□□□□□ -0.89
HERC6-203ENST00000380265 PTH2Q96A98 100 aa9.51□□□□□ -0.89
HERC6-203ENST00000380265 RALYQ9UKM9 306 aaKnown RBP9.51□□□□□ -0.89
HERC6-203ENST00000380265 FABP5P3A8MUU1 101 aa9.51□□□□□ -0.89
HERC6-203ENST00000380265 K7EIM0 57 aa9.51□□□□□ -0.89
HERC6-203ENST00000380265 FCN3O75636 299 aa9.51□□□□□ -0.89
HERC6-203ENST00000380265 C8orf86Q6ZUL3 223 aa9.51□□□□□ -0.89
HERC6-203ENST00000380265 VKORC1Q9BQB6 163 aa9.51□□□□□ -0.89
HERC6-203ENST00000380265 TMEM178BH3BS89 294 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms