RNA–Protein interactions for RNA: ENST00000379996.7

CDKL5-202, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-202ENST00000379996 TCF24Q7RTU0 167 aa5.96□□□□□ -1.45
CDKL5-202ENST00000379996 ATP6V0BQ99437 205 aa5.96□□□□□ -1.45
CDKL5-202ENST00000379996 RASL11BQ9BPW5 248 aa5.96□□□□□ -1.45
CDKL5-202ENST00000379996 NDFIP1Q9BT67 221 aa5.96□□□□□ -1.45
CDKL5-202ENST00000379996 SHANK2-AS3Q9BTD1 123 aa5.96□□□□□ -1.45
CDKL5-202ENST00000379996 CHRDL1Q9BU40 450 aa5.96□□□□□ -1.45
CDKL5-202ENST00000379996 POLQO75417 2590 aa5.96□□□□□ -1.45
CDKL5-202ENST00000379996 TRBV19A0A075B6N1 114 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 NDUFA7O95182 113 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 IGHV4-59P01825 116 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 HBBP68871 147 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 CFHR3Q02985 330 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 SPATA45Q537H7 98 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 SRSF12Q8WXF0 261 aaKnown RBP5.96□□□□□ -1.46
CDKL5-202ENST00000379996 FBXL15Q9H469 300 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 BAHCC1Q9P281 2608 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 IGHV1-24A0A0C4DH33 117 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 DLEU1O43261 78 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 HOXA3O43365 443 aaPredicted RBP5.96□□□□□ -1.46
CDKL5-202ENST00000379996 ARPC1AQ92747 370 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 ZC2HC1AQ96GY0 325 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 SMR3AQ99954 134 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 FAM103A1Q9BTL3 118 aaKnown RBP5.96□□□□□ -1.46
CDKL5-202ENST00000379996 SAMD10Q9BYL1 202 aa5.96□□□□□ -1.46
CDKL5-202ENST00000379996 DNAJC9-AS1A6NH13 148 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 ORM2P19652 201 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 PMCHP20382 165 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 HES1Q14469 280 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 ZNF491Q8N8L2 437 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 LOC102724200A0A096LPH7 203 aaPredicted RBP5.95□□□□□ -1.46
CDKL5-202ENST00000379996 IGHG4P01861 327 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 SLC25A5P05141 298 aaKnown RBP5.95□□□□□ -1.46
CDKL5-202ENST00000379996 BTF3P20290 206 aaKnown RBP5.95□□□□□ -1.46
CDKL5-202ENST00000379996 KRTDAPP60985 99 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 RPL19P84098 196 aaKnown RBP5.95□□□□□ -1.46
CDKL5-202ENST00000379996 LCN12Q6JVE5 192 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 ZNF418Q8TF45 676 aaPredicted RBP5.95□□□□□ -1.46
CDKL5-202ENST00000379996 CHCHD1Q96BP2 118 aaKnown RBP5.95□□□□□ -1.46
CDKL5-202ENST00000379996 ZNF331Q9NQX6 463 aaPredicted RBP5.95□□□□□ -1.46
CDKL5-202ENST00000379996 U3KQK5 164 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 SPG11Q96JI7 2443 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 IGLV11-55A0A075B6I3 123 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 FCGR2BP31994 310 aaPredicted RBP5.95□□□□□ -1.46
CDKL5-202ENST00000379996 ZNF493Q6ZR52 646 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 RBPMS2Q6ZRY4 209 aaKnown RBP5.95□□□□□ -1.46
CDKL5-202ENST00000379996 FAM110DQ8TAY7 271 aaPredicted RBP5.95□□□□□ -1.46
CDKL5-202ENST00000379996 BLNKQ8WV28 456 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 RNF125Q96EQ8 232 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 NPFFR1Q9GZQ6 430 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 ZNF702PQ9H963 129 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 HIGD1AQ9Y241 93 aa5.95□□□□□ -1.46
CDKL5-202ENST00000379996 MRPS16Q9Y3D3 137 aaKnown RBP5.95□□□□□ -1.46
CDKL5-202ENST00000379996 A0A096LNJ9 63 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 C20orf202A1L168 122 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 CD24P25063 80 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 LINC00173Q6ZV60 143 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 LYPD1Q8N2G4 141 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 EXOC3-AS1Q8N2X6 119 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 STPG4Q8N801 248 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 SGK494Q96LW2 274 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 SERTAD4Q9NUC0 356 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 UQCR10Q9UDW1 63 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 TRAV8-1A0A0A6YYK1 113 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 NPSP0C0P6 89 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 ESM1Q9NQ30 184 aa5.94□□□□□ -1.46
CDKL5-202ENST00000379996 IGHV3-21A0A0B4J1V1 117 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 NCBP2LA6PVI3 153 aaKnown RBP5.93□□□□□ -1.46
CDKL5-202ENST00000379996 IGLL1P15814 213 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 EDN2P20800 178 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 TSPOP30536 169 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 NDPQ00604 133 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 PMCHL1Q16048 86 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 ZNF705AQ6ZN79 300 aaPredicted RBP5.93□□□□□ -1.46
CDKL5-202ENST00000379996 IL17RELQ6ZVW7 336 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 TRAV9-2A0A087WT02 112 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 LINC01546A6NGU7 62 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 SH2D7A6NKC9 451 aaPredicted RBP5.93□□□□□ -1.46
CDKL5-202ENST00000379996 A8MWL6 223 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 INAFM1C9JVW0 142 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 APELAP0DMC3 54 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 PPIFP30405 207 aaKnown RBP5.93□□□□□ -1.46
CDKL5-202ENST00000379996 UBE2G1P62253 170 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 PLGLAQ15195 96 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 PRR31Q5SQ13 230 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 H3BTX0 84 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 M0QZ24 198 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 LINC00614P0C842 121 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 PRR27Q6MZM9 219 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 ARL6IP6Q8N6S5 226 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 MYOZ3Q8TDC0 251 aa5.93□□□□□ -1.46
CDKL5-202ENST00000379996 FLNAP21333 2647 aaKnown RBP5.92□□□□□ -1.46
CDKL5-202ENST00000379996 PSG3Q16557 428 aa5.92□□□□□ -1.46
CDKL5-202ENST00000379996 TMEM219Q86XT9 240 aa5.92□□□□□ -1.46
CDKL5-202ENST00000379996 ZFP30Q9Y2G7 519 aa5.92□□□□□ -1.46
CDKL5-202ENST00000379996 A0A087WWL8 130 aa5.92□□□□□ -1.46
CDKL5-202ENST00000379996 ATP6V0E1O15342 81 aa5.92□□□□□ -1.46
CDKL5-202ENST00000379996 TCF21O43680 179 aa5.92□□□□□ -1.46
CDKL5-202ENST00000379996 P01737 135 aa5.92□□□□□ -1.46
CDKL5-202ENST00000379996 PGLYRP4Q96LB8 373 aa5.92□□□□□ -1.46
CDKL5-202ENST00000379996 CLEC5AQ9NY25 188 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms