RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 C11orf68Q9H3H3 251 aaKnown RBP9.61□□□□□ -0.87
CKAP2-202ENST00000378034 X6R8D5 127 aa9.61□□□□□ -0.87
CKAP2-202ENST00000378034 TRBV7-9A0A0J9YWB2 115 aa9.6□□□□□ -0.87
CKAP2-202ENST00000378034 PRB4P10163 310 aaPredicted RBP9.6□□□□□ -0.87
CKAP2-202ENST00000378034 IQCF2Q8IXL9 164 aa9.6□□□□□ -0.87
CKAP2-202ENST00000378034 IL17DQ8TAD2 202 aa9.6□□□□□ -0.87
CKAP2-202ENST00000378034 C20orf144Q9BQM9 153 aa9.6□□□□□ -0.87
CKAP2-202ENST00000378034 NKX6-2Q9C056 277 aaPredicted RBP9.6□□□□□ -0.87
CKAP2-202ENST00000378034 IGKV2-40A0A087WW87 121 aaPredicted RBP9.59□□□□□ -0.87
CKAP2-202ENST00000378034 SERTM2A0A1B0GWG4 89 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 IGKV2D-40P01614 121 aaPredicted RBP9.59□□□□□ -0.87
CKAP2-202ENST00000378034 NMBP08949 121 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 FHITP49789 147 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 FGF8P55075 233 aaPredicted RBP9.59□□□□□ -0.87
CKAP2-202ENST00000378034 ERCC8Q13216 396 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 C1orf158Q8N1D5 194 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 TMEM256Q8N2U0 113 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 C5orf17Q8NAS9 161 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 FAM19A4Q96LR4 140 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 A0A0J9YWU9 116 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 S100A1P23297 94 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 SULT1A2P50226 295 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 Q8NAQ8 132 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 SFT2D1Q8WV19 159 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 VGLL1Q99990 258 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 ZNF492Q9P255 531 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 ARL2-SNX15V9GYD0 113 aa9.59□□□□□ -0.87
CKAP2-202ENST00000378034 H2AFB1P0C5Y9 115 aa9.58□□□□□ -0.88
CKAP2-202ENST00000378034 CRISP2P16562 243 aa9.58□□□□□ -0.88
CKAP2-202ENST00000378034 ZNF138P52744 262 aa9.58□□□□□ -0.88
CKAP2-202ENST00000378034 SLC7A5P1Q8MH63 180 aa9.58□□□□□ -0.88
CKAP2-202ENST00000378034 TMEM208Q9BTX3 173 aa9.58□□□□□ -0.88
CKAP2-202ENST00000378034 TMPRSS5Q9H3S3 457 aa9.58□□□□□ -0.88
CKAP2-202ENST00000378034 BOLA1Q9Y3E2 137 aa9.58□□□□□ -0.88
CKAP2-202ENST00000378034 LENEPQ9Y5L5 61 aa9.58□□□□□ -0.88
CKAP2-202ENST00000378034 TRAV12-2A0A075B6T6 113 aa9.57□□□□□ -0.88
CKAP2-202ENST00000378034 IGHV4-28A0A0C4DH34 117 aa9.57□□□□□ -0.88
CKAP2-202ENST00000378034 SUMO1P63165 101 aaKnown RBP9.57□□□□□ -0.88
CKAP2-202ENST00000378034 IGHV3OR16-12A0A075B7B8 117 aa9.57□□□□□ -0.88
CKAP2-202ENST00000378034 TMEM189A5PLL7 270 aa9.57□□□□□ -0.88
CKAP2-202ENST00000378034 GGTLC3B5MD39 225 aa9.57□□□□□ -0.88
CKAP2-202ENST00000378034 K7EQM0 130 aa9.57□□□□□ -0.88
CKAP2-202ENST00000378034 HBE1P02100 147 aa9.57□□□□□ -0.88
CKAP2-202ENST00000378034 PPT1P50897 306 aa9.57□□□□□ -0.88
CKAP2-202ENST00000378034 MUC7Q8TAX7 377 aa9.57□□□□□ -0.88
CKAP2-202ENST00000378034 TRAV1-1A0A0B4J248 108 aa9.56□□□□□ -0.88
CKAP2-202ENST00000378034 FBLL1A6NHQ2 334 aaKnown RBP9.56□□□□□ -0.88
CKAP2-202ENST00000378034 FAM74A7A6NL05 159 aa9.56□□□□□ -0.88
CKAP2-202ENST00000378034 KLLNB2CW77 178 aa9.56□□□□□ -0.88
CKAP2-202ENST00000378034 C3orf84H3BNL1 204 aa9.56□□□□□ -0.88
CKAP2-202ENST00000378034 TEX46H3BTG2 121 aa9.56□□□□□ -0.88
CKAP2-202ENST00000378034 TCRAP04437 139 aa9.56□□□□□ -0.88
CKAP2-202ENST00000378034 GFI1BQ5VTD9 330 aa9.56□□□□□ -0.88
CKAP2-202ENST00000378034 GOLT1AQ6ZVE7 132 aa9.56□□□□□ -0.88
CKAP2-202ENST00000378034 TCEAL7Q9BRU2 100 aa9.56□□□□□ -0.88
CKAP2-202ENST00000378034 EPDR1Q9UM22 224 aa9.56□□□□□ -0.88
CKAP2-202ENST00000378034 RPH3ALQ9UNE2 315 aa9.56□□□□□ -0.88
CKAP2-202ENST00000378034 YTHDF2Q9Y5A9 579 aaKnown RBP9.56□□□□□ -0.88
CKAP2-202ENST00000378034 H7BYZ3 331 aa9.55□□□□□ -0.88
CKAP2-202ENST00000378034 RBMY1A1P0DJD3 496 aaKnown RBP9.55□□□□□ -0.88
CKAP2-202ENST00000378034 RBMY1CP0DJD4 496 aa9.55□□□□□ -0.88
CKAP2-202ENST00000378034 RBMY1FQ15415 496 aaKnown RBP9.55□□□□□ -0.88
CKAP2-202ENST00000378034 RRN3P1Q2M238 152 aa9.55□□□□□ -0.88
CKAP2-202ENST00000378034 C7orf71A4D174 169 aa9.55□□□□□ -0.88
CKAP2-202ENST00000378034 GPX1P07203 203 aa9.55□□□□□ -0.88
CKAP2-202ENST00000378034 TAS2R60P59551 318 aa9.55□□□□□ -0.88
CKAP2-202ENST00000378034 UBE2G2P60604 165 aa9.55□□□□□ -0.88
CKAP2-202ENST00000378034 GNG5P63218 68 aa9.55□□□□□ -0.88
CKAP2-202ENST00000378034 LINC01587Q99440 93 aa9.55□□□□□ -0.88
CKAP2-202ENST00000378034 NIPSNAP3BQ9BS92 247 aa9.55□□□□□ -0.88
CKAP2-202ENST00000378034 ATG101Q9BSB4 218 aa9.55□□□□□ -0.88
CKAP2-202ENST00000378034 ZFAND2AQ8N6M9 145 aa9.54□□□□□ -0.88
CKAP2-202ENST00000378034 CYB561D1Q8N8Q1 229 aa9.54□□□□□ -0.88
CKAP2-202ENST00000378034 HIST1H2BAQ96A08 127 aa9.54□□□□□ -0.88
CKAP2-202ENST00000378034 DEFB4AO15263 64 aa9.54□□□□□ -0.88
CKAP2-202ENST00000378034 IFNA7P01567 189 aa9.54□□□□□ -0.88
CKAP2-202ENST00000378034 KIR3DS1Q14943 382 aa9.54□□□□□ -0.88
CKAP2-202ENST00000378034 TMEM75Q8N9X5 138 aa9.54□□□□□ -0.88
CKAP2-202ENST00000378034 Q8TAT8 98 aa9.54□□□□□ -0.88
CKAP2-202ENST00000378034 TRAV12-3A0A0B4J271 114 aa9.53□□□□□ -0.88
CKAP2-202ENST00000378034 LOC102723971A0A1B0GUV8 181 aa9.53□□□□□ -0.88
CKAP2-202ENST00000378034 F6UZH7 168 aa9.53□□□□□ -0.88
CKAP2-202ENST00000378034 J3KRW8 73 aa9.53□□□□□ -0.88
CKAP2-202ENST00000378034 CCDC28AQ8IWP9 274 aa9.53□□□□□ -0.88
CKAP2-202ENST00000378034 C11orf45Q8TAV5 145 aa9.53□□□□□ -0.88
CKAP2-202ENST00000378034 PYGO2Q9BRQ0 406 aa9.53□□□□□ -0.88
CKAP2-202ENST00000378034 TEX48A0A1B0GUV7 120 aa9.52□□□□□ -0.89
CKAP2-202ENST00000378034 ZNF324O75467 553 aaPredicted RBP9.52□□□□□ -0.89
CKAP2-202ENST00000378034 RNASE4P34096 147 aaKnown RBP9.52□□□□□ -0.89
CKAP2-202ENST00000378034 CST9LP1Q5W188 147 aa9.52□□□□□ -0.89
CKAP2-202ENST00000378034 ZNF493Q6ZR52 646 aa9.52□□□□□ -0.89
CKAP2-202ENST00000378034 LINC00467Q9BRT7 94 aa9.52□□□□□ -0.89
CKAP2-202ENST00000378034 NDFIP1Q9BT67 221 aa9.52□□□□□ -0.89
CKAP2-202ENST00000378034 MANBALQ9NQG1 85 aa9.52□□□□□ -0.89
CKAP2-202ENST00000378034 A0A1B0GV50 99 aa9.52□□□□□ -0.89
CKAP2-202ENST00000378034 ZNF705GA8MUZ8 300 aaPredicted RBP9.52□□□□□ -0.89
CKAP2-202ENST00000378034 PEX7O00628 323 aa9.52□□□□□ -0.89
CKAP2-202ENST00000378034 PAGE4O60829 102 aa9.52□□□□□ -0.89
CKAP2-202ENST00000378034 BTN1A1Q13410 526 aa9.52□□□□□ -0.89
CKAP2-202ENST00000378034 PMS2P11Q13670 270 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms