RNA–Protein interactions for RNA: ENST00000377755.8

KRT40-201, Transcript of keratin 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT40, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40-201ENST00000377755 PDE6HQ13956 83 aa9.8□□□□□ -0.84
KRT40-201ENST00000377755 COX19Q49B96 90 aa9.8□□□□□ -0.84
KRT40-201ENST00000377755 GBGT1Q8N5D6 347 aa9.8□□□□□ -0.84
KRT40-201ENST00000377755 SPATA3Q8NHX4 192 aa9.8□□□□□ -0.84
KRT40-201ENST00000377755 SMIM12Q96EX1 92 aa9.8□□□□□ -0.84
KRT40-201ENST00000377755 ZNF331Q9NQX6 463 aaPredicted RBP9.8□□□□□ -0.84
KRT40-201ENST00000377755 TRRAPQ9Y4A5 3859 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 HLA-DMBP28068 263 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 COA6Q5JTJ3 125 aaKnown RBP9.79□□□□□ -0.84
KRT40-201ENST00000377755 NRN1Q9NPD7 142 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 NIT2Q9NQR4 276 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 TRAV8-2A0A0B4J237 113 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 XKRY2A2RUG3 117 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 PEX7O00628 323 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 ZNF253O75346 499 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 UBE2G1P62253 170 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 DEFB114Q30KQ6 69 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 IBA57Q5T440 356 aaKnown RBP9.79□□□□□ -0.84
KRT40-201ENST00000377755 DMRTA1Q5VZB9 504 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 LYPD1Q8N2G4 141 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 IGF2BP2-AS1Q96M15 143 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 GPR61Q9BZJ8 451 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 OTORQ9NRC9 128 aa9.79□□□□□ -0.84
KRT40-201ENST00000377755 M0R3E3 92 aa9.78□□□□□ -0.84
KRT40-201ENST00000377755 SOCS3O14543 225 aa9.78□□□□□ -0.84
KRT40-201ENST00000377755 MGST1P10620 155 aaKnown RBP9.78□□□□□ -0.84
KRT40-201ENST00000377755 GNG5P63218 68 aa9.78□□□□□ -0.84
KRT40-201ENST00000377755 PSG9Q00887 426 aa9.78□□□□□ -0.84
KRT40-201ENST00000377755 WFDC3Q8IUB2 231 aa9.78□□□□□ -0.84
KRT40-201ENST00000377755 RNF182Q8N6D2 247 aa9.78□□□□□ -0.84
KRT40-201ENST00000377755 DYNLRB2Q8TF09 96 aa9.78□□□□□ -0.84
KRT40-201ENST00000377755 MS4A6AQ9H2W1 248 aa9.78□□□□□ -0.84
KRT40-201ENST00000377755 SIGLEC8Q9NYZ4 499 aa9.78□□□□□ -0.84
KRT40-201ENST00000377755 V9GYV3 84 aa9.78□□□□□ -0.84
KRT40-201ENST00000377755 VWFP04275 2813 aa9.77□□□□□ -0.84
KRT40-201ENST00000377755 SAP30O75446 220 aa9.77□□□□□ -0.84
KRT40-201ENST00000377755 SLC25A5P05141 298 aaKnown RBP9.77□□□□□ -0.84
KRT40-201ENST00000377755 TFPI2P48307 235 aa9.77□□□□□ -0.84
KRT40-201ENST00000377755 CD300EQ496F6 205 aaPredicted RBP9.77□□□□□ -0.84
KRT40-201ENST00000377755 SHISA2Q6UWI4 295 aa9.77□□□□□ -0.84
KRT40-201ENST00000377755 TMEM61Q8N0U2 210 aa9.77□□□□□ -0.84
KRT40-201ENST00000377755 OR10D4PQ8NGN7 298 aa9.77□□□□□ -0.84
KRT40-201ENST00000377755 DCANP1Q8TF63 244 aa9.77□□□□□ -0.84
KRT40-201ENST00000377755 C16orf92Q96LL3 132 aa9.77□□□□□ -0.84
KRT40-201ENST00000377755 SLC50A1Q9BRV3 221 aa9.77□□□□□ -0.84
KRT40-201ENST00000377755 AAMDCQ9H7C9 122 aa9.77□□□□□ -0.84
KRT40-201ENST00000377755 EPDR1Q9UM22 224 aa9.77□□□□□ -0.84
KRT40-201ENST00000377755 COL6A5A8TX70 2615 aa9.77□□□□□ -0.84
KRT40-201ENST00000377755 MT-ND6P03923 174 aa9.77□□□□□ -0.85
KRT40-201ENST00000377755 FABP4P15090 132 aa9.77□□□□□ -0.85
KRT40-201ENST00000377755 OR5I1Q13606 314 aa9.77□□□□□ -0.85
KRT40-201ENST00000377755 TMEM183BQ1AE95 376 aa9.77□□□□□ -0.85
KRT40-201ENST00000377755 DNLZQ5SXM8 178 aa9.77□□□□□ -0.85
KRT40-201ENST00000377755 WDR73Q6P4I2 378 aa9.77□□□□□ -0.85
KRT40-201ENST00000377755 FAM231DQ6ZW35 169 aa9.77□□□□□ -0.85
KRT40-201ENST00000377755 BAGE2Q86Y30 109 aa9.77□□□□□ -0.85
KRT40-201ENST00000377755 C5orf17Q8NAS9 161 aa9.77□□□□□ -0.85
KRT40-201ENST00000377755 PACRGQ96M98 296 aaPredicted RBP9.77□□□□□ -0.85
KRT40-201ENST00000377755 MDFIQ99750 246 aa9.77□□□□□ -0.85
KRT40-201ENST00000377755 RPH3ALQ9UNE2 315 aa9.77□□□□□ -0.85
KRT40-201ENST00000377755 STAB1Q9NY15 2570 aa9.76□□□□□ -0.85
KRT40-201ENST00000377755 IZUMO1RA6ND01 250 aa9.76□□□□□ -0.85
KRT40-201ENST00000377755 IFITM10A6NMD0 228 aa9.76□□□□□ -0.85
KRT40-201ENST00000377755 ZNF705FA8MVS1 300 aaPredicted RBP9.76□□□□□ -0.85
KRT40-201ENST00000377755 PDZD11Q5EBL8 140 aa9.76□□□□□ -0.85
KRT40-201ENST00000377755 RBPMS2Q6ZRY4 209 aaKnown RBP9.76□□□□□ -0.85
KRT40-201ENST00000377755 CMTM2Q8TAZ6 248 aa9.76□□□□□ -0.85
KRT40-201ENST00000377755 FMC1Q96HJ9 113 aa9.76□□□□□ -0.85
KRT40-201ENST00000377755 C20orf173Q96LM9 149 aa9.76□□□□□ -0.85
KRT40-201ENST00000377755 LINC00479Q96M42 142 aa9.76□□□□□ -0.85
KRT40-201ENST00000377755 ATG101Q9BSB4 218 aa9.76□□□□□ -0.85
KRT40-201ENST00000377755 TCRAP04437 139 aa9.75□□□□□ -0.85
KRT40-201ENST00000377755 GFI1BQ5VTD9 330 aa9.75□□□□□ -0.85
KRT40-201ENST00000377755 TMEM18Q96B42 140 aa9.75□□□□□ -0.85
KRT40-201ENST00000377755 GNB1LQ9BYB4 327 aa9.75□□□□□ -0.85
KRT40-201ENST00000377755 ZNF705GA8MUZ8 300 aaPredicted RBP9.75□□□□□ -0.85
KRT40-201ENST00000377755 K7EQG2 157 aa9.75□□□□□ -0.85
KRT40-201ENST00000377755 IGLV2-8P01709 118 aa9.75□□□□□ -0.85
KRT40-201ENST00000377755 LCN12Q6JVE5 192 aa9.75□□□□□ -0.85
KRT40-201ENST00000377755 HIST1H2BLQ99880 126 aa9.75□□□□□ -0.85
KRT40-201ENST00000377755 RNASE7Q9H1E1 156 aaKnown RBP9.75□□□□□ -0.85
KRT40-201ENST00000377755 KLF12Q9Y4X4 402 aa9.75□□□□□ -0.85
KRT40-201ENST00000377755 DIRC3C9JPN6 131 aa9.74□□□□□ -0.85
KRT40-201ENST00000377755 PRAC2D3DTV9 90 aa9.74□□□□□ -0.85
KRT40-201ENST00000377755 GATCO43716 136 aaKnown RBP9.74□□□□□ -0.85
KRT40-201ENST00000377755 IGLV1-51P01701 117 aa9.74□□□□□ -0.85
KRT40-201ENST00000377755 PAFAH1B2P68402 229 aa9.74□□□□□ -0.85
KRT40-201ENST00000377755 SGK494Q96LW2 274 aa9.74□□□□□ -0.85
KRT40-201ENST00000377755 TRAV34A0A0B4J273 112 aa9.73□□□□□ -0.85
KRT40-201ENST00000377755 SMIM27A0A1W2PRY6 76 aa9.73□□□□□ -0.85
KRT40-201ENST00000377755 DEFB1P60022 68 aa9.73□□□□□ -0.85
KRT40-201ENST00000377755 PSG3Q16557 428 aa9.73□□□□□ -0.85
KRT40-201ENST00000377755 PYY3Q5JQD4 70 aa9.73□□□□□ -0.85
KRT40-201ENST00000377755 RASL11AQ6T310 242 aa9.73□□□□□ -0.85
KRT40-201ENST00000377755 GOLT1AQ6ZVE7 132 aa9.73□□□□□ -0.85
KRT40-201ENST00000377755 WFDC9Q8NEX5 89 aa9.73□□□□□ -0.85
KRT40-201ENST00000377755 ZNF688P0C7X2 276 aa9.72□□□□□ -0.85
KRT40-201ENST00000377755 CSN1S1P47710 185 aa9.72□□□□□ -0.85
KRT40-201ENST00000377755 MRPL18Q9H0U6 180 aaKnown RBP9.72□□□□□ -0.85
KRT40-201ENST00000377755 IGKV2-40A0A087WW87 121 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms