RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 DPF1Q92782 380 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 ZC2HC1AQ96GY0 325 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 FAM19A4Q96LR4 140 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 NDFIP1Q9BT67 221 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 IZUMO1RA6ND01 250 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 A8MWL6 223 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 P01737 135 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 DAZAP1Q96EP5 407 aaKnown RBP8.39□□□□□ -1.07
PDPN-202ENST00000376057 VGLL1Q99990 258 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 RNF114Q9Y508 228 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 IGKV2-40A0A087WW87 121 aaPredicted RBP8.39□□□□□ -1.07
PDPN-202ENST00000376057 ZNF705FA8MVS1 300 aaPredicted RBP8.39□□□□□ -1.07
PDPN-202ENST00000376057 IGKV2D-40P01614 121 aaPredicted RBP8.39□□□□□ -1.07
PDPN-202ENST00000376057 CD28P10747 220 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 HLA-DMBP28068 263 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 ZNF138P52744 262 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 ADAMTSL5Q6ZMM2 481 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 LINC00322Q6ZN03 302 aaPredicted RBP8.39□□□□□ -1.07
PDPN-202ENST00000376057 C18orf65Q6ZTR6 163 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 ATP5L2Q7Z4Y8 100 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 APRG1Q8IVJ8 170 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 NHLRC2Q8NBF2 726 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 C20orf173Q96LM9 149 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 ODF3Q96PU9 254 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 NAT8BQ9UHF3 227 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 HECTD1Q9ULT8 2610 aa8.39□□□□□ -1.07
PDPN-202ENST00000376057 CCDC168Q8NDH2 2452 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 TRAV25A0A0B4J276 109 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 K7EQG2 157 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 FAM162BQ5T6X4 162 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 RNF182Q8N6D2 247 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 RAX2Q96IS3 184 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 AGPAT4-IT1Q9H0P7 198 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 PRAC2D3DTV9 90 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 CSN3P07498 182 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 CT45A10P0DMU9 189 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 RPS10P46783 165 aaKnown RBP8.38□□□□□ -1.07
PDPN-202ENST00000376057 CRIP1P50238 77 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 RPS20P60866 119 aaKnown RBP8.38□□□□□ -1.07
PDPN-202ENST00000376057 Q6AWC8 147 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 MS4A6AQ9H2W1 248 aa8.38□□□□□ -1.07
PDPN-202ENST00000376057 A0A1W2PPQ1 181 aa8.37□□□□□ -1.07
PDPN-202ENST00000376057 SLURP1P55000 103 aa8.37□□□□□ -1.07
PDPN-202ENST00000376057 ACTL10Q5JWF8 245 aa8.37□□□□□ -1.07
PDPN-202ENST00000376057 TMEM78Q5T7P6 136 aa8.37□□□□□ -1.07
PDPN-202ENST00000376057 SGK494Q96LW2 274 aa8.37□□□□□ -1.07
PDPN-202ENST00000376057 ASCL2Q99929 193 aa8.37□□□□□ -1.07
PDPN-202ENST00000376057 GNB1LQ9BYB4 327 aa8.37□□□□□ -1.07
PDPN-202ENST00000376057 GSN-AS1Q9NRJ2 163 aa8.37□□□□□ -1.07
PDPN-202ENST00000376057 IGFL4Q6B9Z1 124 aa8.37□□□□□ -1.07
PDPN-202ENST00000376057 WDR73Q6P4I2 378 aa8.37□□□□□ -1.07
PDPN-202ENST00000376057 NDUFA11Q86Y39 141 aa8.37□□□□□ -1.07
PDPN-202ENST00000376057 ADARB2-AS1A8MUL3 147 aa8.36□□□□□ -1.07
PDPN-202ENST00000376057 CCL24O00175 119 aa8.36□□□□□ -1.07
PDPN-202ENST00000376057 MT-ND6P03923 174 aa8.36□□□□□ -1.07
PDPN-202ENST00000376057 PAFAH1B2P68402 229 aa8.36□□□□□ -1.07
PDPN-202ENST00000376057 HIST1H1AQ02539 215 aaPredicted RBP8.36□□□□□ -1.07
PDPN-202ENST00000376057 OR10J6PQ8NGY7 276 aa8.36□□□□□ -1.07
PDPN-202ENST00000376057 DLX4Q92988 240 aaPredicted RBP8.36□□□□□ -1.07
PDPN-202ENST00000376057 CITED2Q99967 270 aaPredicted RBP8.36□□□□□ -1.07
PDPN-202ENST00000376057 CRISP2P16562 243 aa8.36□□□□□ -1.07
PDPN-202ENST00000376057 ZNF738Q8NE65 137 aa8.36□□□□□ -1.07
PDPN-202ENST00000376057 C8orf49Q96NF6 230 aa8.36□□□□□ -1.07
PDPN-202ENST00000376057 MYO9AB2RTY4 2548 aa8.36□□□□□ -1.07
PDPN-202ENST00000376057 FABP5P3A8MUU1 101 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 EDN2P20800 178 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 SNRPD3P62318 126 aaKnown RBP8.35□□□□□ -1.07
PDPN-202ENST00000376057 GATD1Q8NB37 220 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 OR8A1Q8NGG7 326 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 A0A1B0GW15 77 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 XKRY2A2RUG3 117 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 A8MTW9 85 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 DEFB136Q30KP8 78 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 LINC01559Q495D7 138 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 PRR27Q6MZM9 219 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 RBPMS2Q6ZRY4 209 aaKnown RBP8.35□□□□□ -1.07
PDPN-202ENST00000376057 NUP35Q8NFH5 326 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 OR2K2Q8NGT1 345 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 SH2D1AO60880 128 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 RPL11P62913 178 aaKnown RBP8.35□□□□□ -1.07
PDPN-202ENST00000376057 ERCC8Q13216 396 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 NEU1Q99519 415 aa8.35□□□□□ -1.07
PDPN-202ENST00000376057 A0A1B0GXF2 115 aa8.34□□□□□ -1.07
PDPN-202ENST00000376057 DEFB114Q30KQ6 69 aa8.34□□□□□ -1.07
PDPN-202ENST00000376057 TRGC2P03986 189 aa8.34□□□□□ -1.07
PDPN-202ENST00000376057 GTSF1Q8WW33 167 aa8.34□□□□□ -1.07
PDPN-202ENST00000376057 CLUHP3Q96NS8 147 aa8.34□□□□□ -1.07
PDPN-202ENST00000376057 GPR61Q9BZJ8 451 aa8.34□□□□□ -1.07
PDPN-202ENST00000376057 HAX1O00165 279 aa8.33□□□□□ -1.08
PDPN-202ENST00000376057 KHDC1LQ5JSQ8 128 aa8.33□□□□□ -1.08
PDPN-202ENST00000376057 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
PDPN-202ENST00000376057 HIGD1CA8MV81 97 aa8.33□□□□□ -1.08
PDPN-202ENST00000376057 ZNF80P51504 273 aaPredicted RBP8.33□□□□□ -1.08
PDPN-202ENST00000376057 SPAG8Q99932 426 aaPredicted RBP8.33□□□□□ -1.08
PDPN-202ENST00000376057 TMEM189A5PLL7 270 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 DUSP14O95147 198 aaKnown RBP8.32□□□□□ -1.08
PDPN-202ENST00000376057 HLA-DQA1P01909 254 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 PCP4P48539 62 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 COA6Q5JTJ3 125 aaKnown RBP8.32□□□□□ -1.08
PDPN-202ENST00000376057 DNLZQ5SXM8 178 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms