RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 IFNA1P01562 189 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 PPT1P50897 306 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 DEFB1P60022 68 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 CLLU1Q5K131 121 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 CST9LP1Q5W188 147 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 ZNF738Q8NE65 137 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 NEU1Q99519 415 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 MANBALQ9NQG1 85 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 RPH3ALQ9UNE2 315 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 GOLT1BQ9Y3E0 138 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 X6R8D5 127 aa11.17□□□□□ -0.62
APOA1-205ENST00000375329 TMEM189A5PLL7 270 aa11.16□□□□□ -0.62
APOA1-205ENST00000375329 ZNF705FA8MVS1 300 aaPredicted RBP11.16□□□□□ -0.62
APOA1-205ENST00000375329 GGTLC3B5MD39 225 aa11.16□□□□□ -0.62
APOA1-205ENST00000375329 F6UB75 175 aa11.16□□□□□ -0.62
APOA1-205ENST00000375329 M0R3E3 92 aa11.16□□□□□ -0.62
APOA1-205ENST00000375329 DEFB4AO15263 64 aa11.16□□□□□ -0.62
APOA1-205ENST00000375329 ATP5G3P48201 142 aa11.16□□□□□ -0.62
APOA1-205ENST00000375329 SUMO1P63165 101 aaKnown RBP11.16□□□□□ -0.62
APOA1-205ENST00000375329 PSG3Q16557 428 aa11.16□□□□□ -0.62
APOA1-205ENST00000375329 LYPD1Q8N2G4 141 aa11.16□□□□□ -0.62
APOA1-205ENST00000375329 OTORQ9NRC9 128 aa11.16□□□□□ -0.62
APOA1-205ENST00000375329 A0A1W2PRE2 83 aa11.15□□□□□ -0.62
APOA1-205ENST00000375329 A8MTW9 85 aa11.15□□□□□ -0.62
APOA1-205ENST00000375329 C11orf94C9JXX5 98 aa11.15□□□□□ -0.62
APOA1-205ENST00000375329 SLC25A5P05141 298 aaKnown RBP11.15□□□□□ -0.62
APOA1-205ENST00000375329 NANOS2P60321 138 aaKnown RBP11.15□□□□□ -0.62
APOA1-205ENST00000375329 GNG5P63218 68 aa11.15□□□□□ -0.62
APOA1-205ENST00000375329 ZNF705AQ6ZN79 300 aaPredicted RBP11.15□□□□□ -0.62
APOA1-205ENST00000375329 PPP1R14DQ9NXH3 145 aa11.15□□□□□ -0.62
APOA1-205ENST00000375329 DYNC2H1Q8NCM8 4307 aaKnown RBP11.14□□□□□ -0.63
APOA1-205ENST00000375329 RBMY1A1P0DJD3 496 aaKnown RBP11.14□□□□□ -0.63
APOA1-205ENST00000375329 RBMY1CP0DJD4 496 aa11.14□□□□□ -0.63
APOA1-205ENST00000375329 BCL2P10415 239 aa11.14□□□□□ -0.63
APOA1-205ENST00000375329 CNN1P51911 297 aaKnown RBP11.14□□□□□ -0.63
APOA1-205ENST00000375329 FXYD7P58549 80 aa11.14□□□□□ -0.63
APOA1-205ENST00000375329 RBMY1FQ15415 496 aaKnown RBP11.14□□□□□ -0.63
APOA1-205ENST00000375329 TOR2AQ5JU69 321 aa11.14□□□□□ -0.63
APOA1-205ENST00000375329 CMTM2Q8TAZ6 248 aa11.14□□□□□ -0.63
APOA1-205ENST00000375329 RPUSD4Q96CM3 377 aaKnown RBP11.14□□□□□ -0.63
APOA1-205ENST00000375329 SLC35B3Q9H1N7 401 aa11.14□□□□□ -0.63
APOA1-205ENST00000375329 PRELID1Q9Y255 219 aa11.14□□□□□ -0.63
APOA1-205ENST00000375329 ARL2-SNX15V9GYD0 113 aa11.14□□□□□ -0.63
APOA1-205ENST00000375329 LOC102723971A0A1B0GUV8 181 aa11.13□□□□□ -0.63
APOA1-205ENST00000375329 RBFOX3A6NFN3 312 aa11.13□□□□□ -0.63
APOA1-205ENST00000375329 PRAC2D3DTV9 90 aa11.13□□□□□ -0.63
APOA1-205ENST00000375329 ZNF705DP0CH99 300 aaPredicted RBP11.13□□□□□ -0.63
APOA1-205ENST00000375329 ZNF705BP0CI00 300 aaPredicted RBP11.13□□□□□ -0.63
APOA1-205ENST00000375329 CSN1S1P47710 185 aa11.13□□□□□ -0.63
APOA1-205ENST00000375329 TCTAP57738 103 aa11.13□□□□□ -0.63
APOA1-205ENST00000375329 RXFP4Q8TDU9 374 aa11.13□□□□□ -0.63
APOA1-205ENST00000375329 IGF2BP2-AS1Q96M15 143 aa11.13□□□□□ -0.63
APOA1-205ENST00000375329 TMEM208Q9BTX3 173 aa11.13□□□□□ -0.63
APOA1-205ENST00000375329 LYSTQ99698 3801 aa11.12□□□□□ -0.63
APOA1-205ENST00000375329 IGHV3OR16-12A0A075B7B8 117 aa11.12□□□□□ -0.63
APOA1-205ENST00000375329 IGKV2-40A0A087WW87 121 aaPredicted RBP11.12□□□□□ -0.63
APOA1-205ENST00000375329 TEX48A0A1B0GUV7 120 aa11.12□□□□□ -0.63
APOA1-205ENST00000375329 IGKV2D-40P01614 121 aaPredicted RBP11.12□□□□□ -0.63
APOA1-205ENST00000375329 HIST1H1AQ02539 215 aaPredicted RBP11.12□□□□□ -0.63
APOA1-205ENST00000375329 C5orf17Q8NAS9 161 aa11.12□□□□□ -0.63
APOA1-205ENST00000375329 OR8A1Q8NGG7 326 aa11.12□□□□□ -0.63
APOA1-205ENST00000375329 C2CD4CQ8TF44 421 aa11.12□□□□□ -0.63
APOA1-205ENST00000375329 MRPL53Q96EL3 112 aaKnown RBP11.12□□□□□ -0.63
APOA1-205ENST00000375329 FAM210AQ96ND0 272 aa11.12□□□□□ -0.63
APOA1-205ENST00000375329 EIF5A2Q9GZV4 153 aaKnown RBP11.12□□□□□ -0.63
APOA1-205ENST00000375329 VAX2Q9UIW0 290 aa11.12□□□□□ -0.63
APOA1-205ENST00000375329 RYR2Q92736 4967 aa11.12□□□□□ -0.63
APOA1-205ENST00000375329 INSP01308 110 aa11.11□□□□□ -0.63
APOA1-205ENST00000375329 AMTNQ6UX39 209 aa11.11□□□□□ -0.63
APOA1-205ENST00000375329 NKX6-2Q9C056 277 aaPredicted RBP11.11□□□□□ -0.63
APOA1-205ENST00000375329 EPDR1Q9UM22 224 aa11.11□□□□□ -0.63
APOA1-205ENST00000375329 TRAV10A0A0B4J240 114 aa11.1□□□□□ -0.63
APOA1-205ENST00000375329 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
APOA1-205ENST00000375329 DIRC3C9JPN6 131 aa11.1□□□□□ -0.63
APOA1-205ENST00000375329 MEF2BQ02080 365 aaPredicted RBP11.1□□□□□ -0.63
APOA1-205ENST00000375329 ERCC8Q13216 396 aa11.1□□□□□ -0.63
APOA1-205ENST00000375329 RRN3P1Q2M238 152 aa11.1□□□□□ -0.63
APOA1-205ENST00000375329 ZNF506Q5JVG8 444 aa11.1□□□□□ -0.63
APOA1-205ENST00000375329 GOLT1AQ6ZVE7 132 aa11.1□□□□□ -0.63
APOA1-205ENST00000375329 CCDC28AQ8IWP9 274 aa11.1□□□□□ -0.63
APOA1-205ENST00000375329 OR10J6PQ8NGY7 276 aa11.1□□□□□ -0.63
APOA1-205ENST00000375329 LINC00476Q8WZB0 136 aa11.1□□□□□ -0.63
APOA1-205ENST00000375329 PEX7O00628 323 aa11.09□□□□□ -0.63
APOA1-205ENST00000375329 TCRAP04437 139 aa11.09□□□□□ -0.63
APOA1-205ENST00000375329 SPART-AS1P0CW21 52 aa11.09□□□□□ -0.63
APOA1-205ENST00000375329 TAGLN2P37802 199 aaKnown RBP11.09□□□□□ -0.63
APOA1-205ENST00000375329 SRSF3P84103 164 aaKnown RBP11.09□□□□□ -0.63
APOA1-205ENST00000375329 SPINK13Q1W4C9 94 aa11.09□□□□□ -0.63
APOA1-205ENST00000375329 TMEM256Q8N2U0 113 aa11.09□□□□□ -0.63
APOA1-205ENST00000375329 EPPK1P58107 5090 aaKnown RBP11.09□□□□□ -0.63
APOA1-205ENST00000375329 F6UZH7 168 aa11.08□□□□□ -0.64
APOA1-205ENST00000375329 TSPOP30536 169 aa11.08□□□□□ -0.64
APOA1-205ENST00000375329 C1orf158Q8N1D5 194 aa11.08□□□□□ -0.64
APOA1-205ENST00000375329 CYB561D1Q8N8Q1 229 aa11.08□□□□□ -0.64
APOA1-205ENST00000375329 SGK494Q96LW2 274 aa11.08□□□□□ -0.64
APOA1-205ENST00000375329 VGLL1Q99990 258 aa11.08□□□□□ -0.64
APOA1-205ENST00000375329 TXNDC17Q9BRA2 123 aa11.08□□□□□ -0.64
APOA1-205ENST00000375329 ATG101Q9BSB4 218 aa11.08□□□□□ -0.64
APOA1-205ENST00000375329 TRAV8-1A0A0A6YYK1 113 aa11.07□□□□□ -0.64
APOA1-205ENST00000375329 TRAV34A0A0B4J273 112 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms