RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ARL6IP6Q8N6S5 226 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 CCDC140Q96MF4 163 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 TPPP3Q9BW30 176 aa9.36□□□□□ -0.91
HMGCL-202ENST00000374487 IGFL4Q6B9Z1 124 aa9.35□□□□□ -0.91
HMGCL-202ENST00000374487 ZFAND3Q9H8U3 227 aa9.35□□□□□ -0.91
HMGCL-202ENST00000374487 LINC00527Q9UJ94 153 aa9.35□□□□□ -0.91
HMGCL-202ENST00000374487 FBLL1A6NHQ2 334 aaKnown RBP9.34□□□□□ -0.91
HMGCL-202ENST00000374487 BUB3O43684 328 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 IGHV4-38-2P0DP08 117 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 RIGQ13278 110 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 PIFOQ8TCI5 191 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 NDUFAF3Q9BU61 184 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 MEGF9Q9H1U4 602 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 HIVEP2P31629 2446 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.34□□□□□ -0.91
HMGCL-202ENST00000374487 IGHV3-66A0A0C4DH42 116 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 AVPP01185 164 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 MSMBP08118 114 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 LY6EQ16553 131 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 FAM162BQ5T6X4 162 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 Q6AWC8 147 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 VAMP8Q9BV40 100 aa9.34□□□□□ -0.91
HMGCL-202ENST00000374487 TMEM189A5PLL7 270 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 M0R2Z0 102 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 HLA-DMBP28068 263 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 LCN12Q6JVE5 192 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 TEX43Q6ZNM6 134 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 NIT1Q86X76 327 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 LINC01356Q8N9X3 169 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 PRR25Q96S07 402 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 METTL26Q96S19 204 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 HIF1ANQ9NWT6 349 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 IGHV3OR16-13A0A075B7E8 117 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 TMSB15BA0A087X1C1 80 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 LOC102724200A0A096LPH7 203 aaPredicted RBP9.33□□□□□ -0.92
HMGCL-202ENST00000374487 IGHV3-74A0A0B4J1X5 117 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 FAM223BA6NKX1 122 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 APOHP02749 345 aaPredicted RBP9.33□□□□□ -0.92
HMGCL-202ENST00000374487 TRGV3P03979 118 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 ARMS2P0C7Q2 107 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 TDRG1Q3Y452 100 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 FAM223AQ8IWN6 122 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 VGLL1Q99990 258 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 PAM16Q9Y3D7 125 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 RNF114Q9Y508 228 aa9.33□□□□□ -0.92
HMGCL-202ENST00000374487 KIR2DL5BA0A0G2JN68 375 aa9.32□□□□□ -0.92
HMGCL-202ENST00000374487 KIR2DL5BA0A0G2JPC4 375 aa9.32□□□□□ -0.92
HMGCL-202ENST00000374487 A0A1B0GW15 77 aa9.32□□□□□ -0.92
HMGCL-202ENST00000374487 H3BUX3 64 aa9.32□□□□□ -0.92
HMGCL-202ENST00000374487 ZNF207O43670 478 aaKnown RBP9.32□□□□□ -0.92
HMGCL-202ENST00000374487 SH2D1AO60880 128 aa9.32□□□□□ -0.92
HMGCL-202ENST00000374487 SRSF2Q01130 221 aaKnown RBP9.32□□□□□ -0.92
HMGCL-202ENST00000374487 PRIMA1Q86XR5 153 aa9.32□□□□□ -0.92
HMGCL-202ENST00000374487 KIR2DL5AQ8N109 375 aa9.32□□□□□ -0.92
HMGCL-202ENST00000374487 Q8TAT8 98 aa9.32□□□□□ -0.92
HMGCL-202ENST00000374487 NDFIP1Q9BT67 221 aa9.32□□□□□ -0.92
HMGCL-202ENST00000374487 IGHV3-49A0A0A0MS15 119 aa9.31□□□□□ -0.92
HMGCL-202ENST00000374487 CLPSL1A2RUU4 121 aa9.31□□□□□ -0.92
HMGCL-202ENST00000374487 B4DSR2 109 aa9.31□□□□□ -0.92
HMGCL-202ENST00000374487 IGHG4P01861 327 aa9.31□□□□□ -0.92
HMGCL-202ENST00000374487 C3orf79P0CE67 100 aa9.31□□□□□ -0.92
HMGCL-202ENST00000374487 SSTP61278 116 aa9.31□□□□□ -0.92
HMGCL-202ENST00000374487 A0A087X0K7 114 aa9.31□□□□□ -0.92
HMGCL-202ENST00000374487 CRLF1O75462 422 aa9.31□□□□□ -0.92
HMGCL-202ENST00000374487 BMI1P35226 326 aa9.31□□□□□ -0.92
HMGCL-202ENST00000374487 SLC50A1Q9BRV3 221 aa9.31□□□□□ -0.92
HMGCL-202ENST00000374487 CRIP2P52943 208 aaPredicted RBP9.3□□□□□ -0.92
HMGCL-202ENST00000374487 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.3□□□□□ -0.92
HMGCL-202ENST00000374487 COX8CQ7Z4L0 72 aa9.3□□□□□ -0.92
HMGCL-202ENST00000374487 RNF182Q8N6D2 247 aa9.3□□□□□ -0.92
HMGCL-202ENST00000374487 ATP6V0BQ99437 205 aa9.3□□□□□ -0.92
HMGCL-202ENST00000374487 FAM181BA6NEQ2 426 aa9.3□□□□□ -0.92
HMGCL-202ENST00000374487 M0QZ24 198 aa9.3□□□□□ -0.92
HMGCL-202ENST00000374487 M0QZK8 103 aa9.3□□□□□ -0.92
HMGCL-202ENST00000374487 IGF1P05019 195 aa9.3□□□□□ -0.92
HMGCL-202ENST00000374487 ARL3P36405 182 aa9.3□□□□□ -0.92
HMGCL-202ENST00000374487 C19orf54Q5BKX5 351 aa9.3□□□□□ -0.92
HMGCL-202ENST00000374487 LYZL1Q6UWQ5 148 aa9.3□□□□□ -0.92
HMGCL-202ENST00000374487 CHCHD1Q96BP2 118 aaKnown RBP9.3□□□□□ -0.92
HMGCL-202ENST00000374487 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.29□□□□□ -0.92
HMGCL-202ENST00000374487 LINC00614P0C842 121 aa9.29□□□□□ -0.92
HMGCL-202ENST00000374487 ERCC8Q13216 396 aa9.29□□□□□ -0.92
HMGCL-202ENST00000374487 Q8N976 141 aa9.29□□□□□ -0.92
HMGCL-202ENST00000374487 C20orf144Q9BQM9 153 aa9.29□□□□□ -0.92
HMGCL-202ENST00000374487 A6NDX4 124 aa9.29□□□□□ -0.92
HMGCL-202ENST00000374487 PRAC2D3DTV9 90 aa9.29□□□□□ -0.92
HMGCL-202ENST00000374487 RPS20P60866 119 aaKnown RBP9.29□□□□□ -0.92
HMGCL-202ENST00000374487 ZNF705AQ6ZN79 300 aaPredicted RBP9.29□□□□□ -0.92
HMGCL-202ENST00000374487 URB1-AS1Q96HZ7 61 aa9.29□□□□□ -0.92
HMGCL-202ENST00000374487 MXRA5Q9NR99 2828 aa9.28□□□□□ -0.92
HMGCL-202ENST00000374487 C2CD3Q4AC94 2353 aa9.28□□□□□ -0.92
HMGCL-202ENST00000374487 IGHG2P01859 326 aa9.28□□□□□ -0.92
HMGCL-202ENST00000374487 ORM1P02763 201 aa9.28□□□□□ -0.92
HMGCL-202ENST00000374487 BTF3P20290 206 aaKnown RBP9.28□□□□□ -0.92
HMGCL-202ENST00000374487 ZNF80P51504 273 aaPredicted RBP9.28□□□□□ -0.92
HMGCL-202ENST00000374487 PMCHL1Q16048 86 aa9.28□□□□□ -0.92
HMGCL-202ENST00000374487 LBHQ53QV2 105 aaPredicted RBP9.28□□□□□ -0.92
HMGCL-202ENST00000374487 JMJD1CQ15652 2540 aa9.27□□□□□ -0.92
HMGCL-202ENST00000374487 RBAKDNA6NC62 111 aa9.27□□□□□ -0.92
HMGCL-202ENST00000374487 FABP5P3A8MUU1 101 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms