RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 GNB1LQ9BYB4 327 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 RBAKDNA6NC62 111 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 MT-ND6P03923 174 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 PDZD11Q5EBL8 140 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 KHDC1LQ5JSQ8 128 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 TMEM136Q6ZRR5 245 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 ZNF738Q8NE65 137 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 C20orf173Q96LM9 149 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 NRN1Q9NPD7 142 aa12.84□□□□□ -0.35
PTPN20-203ENST00000374342 SH2D1AO60880 128 aa12.83□□□□□ -0.36
PTPN20-203ENST00000374342 COX19Q49B96 90 aa12.83□□□□□ -0.36
PTPN20-203ENST00000374342 FAM162BQ5T6X4 162 aa12.83□□□□□ -0.36
PTPN20-203ENST00000374342 C18orf65Q6ZTR6 163 aa12.83□□□□□ -0.36
PTPN20-203ENST00000374342 PGLYRP4Q96LB8 373 aa12.83□□□□□ -0.36
PTPN20-203ENST00000374342 SMR3AQ99954 134 aa12.83□□□□□ -0.36
PTPN20-203ENST00000374342 GFRA4Q9GZZ7 299 aa12.83□□□□□ -0.36
PTPN20-203ENST00000374342 TMEM213A2RRL7 107 aa12.82□□□□□ -0.36
PTPN20-203ENST00000374342 SOCS3O14543 225 aa12.82□□□□□ -0.36
PTPN20-203ENST00000374342 HOXD3P31249 432 aaPredicted RBP12.82□□□□□ -0.36
PTPN20-203ENST00000374342 CDX1P47902 265 aaPredicted RBP12.82□□□□□ -0.36
PTPN20-203ENST00000374342 SYNJ2BPP57105 145 aa12.82□□□□□ -0.36
PTPN20-203ENST00000374342 DEFB136Q30KP8 78 aa12.82□□□□□ -0.36
PTPN20-203ENST00000374342 CLEC5AQ9NY25 188 aa12.82□□□□□ -0.36
PTPN20-203ENST00000374342 HLA-DQA1P01909 254 aa12.82□□□□□ -0.36
PTPN20-203ENST00000374342 SCGB2A2Q13296 93 aa12.82□□□□□ -0.36
PTPN20-203ENST00000374342 TMEM78Q5T7P6 136 aa12.82□□□□□ -0.36
PTPN20-203ENST00000374342 COX8CQ7Z4L0 72 aa12.82□□□□□ -0.36
PTPN20-203ENST00000374342 REC114Q7Z4M0 266 aa12.82□□□□□ -0.36
PTPN20-203ENST00000374342 MYO9AB2RTY4 2548 aa12.81□□□□□ -0.36
PTPN20-203ENST00000374342 A8MWP6 167 aa12.81□□□□□ -0.36
PTPN20-203ENST00000374342 SRD5A1P18405 259 aa12.81□□□□□ -0.36
PTPN20-203ENST00000374342 BMI1P35226 326 aa12.81□□□□□ -0.36
PTPN20-203ENST00000374342 RBPMS2Q6ZRY4 209 aaKnown RBP12.81□□□□□ -0.36
PTPN20-203ENST00000374342 HIST3H2BBQ8N257 126 aa12.81□□□□□ -0.36
PTPN20-203ENST00000374342 WIPF2Q8TF74 440 aaPredicted RBP12.81□□□□□ -0.36
PTPN20-203ENST00000374342 IFITM10A6NMD0 228 aa12.8□□□□□ -0.36
PTPN20-203ENST00000374342 ZNF80P51504 273 aaPredicted RBP12.8□□□□□ -0.36
PTPN20-203ENST00000374342 RASL11AQ6T310 242 aa12.8□□□□□ -0.36
PTPN20-203ENST00000374342 ATP5L2Q7Z4Y8 100 aa12.8□□□□□ -0.36
PTPN20-203ENST00000374342 AGPAT4-IT1Q9H0P7 198 aa12.8□□□□□ -0.36
PTPN20-203ENST00000374342 TMSB15BA0A087X1C1 80 aa12.8□□□□□ -0.36
PTPN20-203ENST00000374342 FAM231BA6NCW3 169 aa12.8□□□□□ -0.36
PTPN20-203ENST00000374342 CAMPP49913 170 aa12.8□□□□□ -0.36
PTPN20-203ENST00000374342 TCTEX1D4Q5JR98 221 aa12.8□□□□□ -0.36
PTPN20-203ENST00000374342 A0A1B0GXF2 115 aa12.79□□□□□ -0.36
PTPN20-203ENST00000374342 GRIFINA4D1Z8 144 aa12.79□□□□□ -0.36
PTPN20-203ENST00000374342 TMEM189A5PLL7 270 aa12.79□□□□□ -0.36
PTPN20-203ENST00000374342 ZNF705DP0CH99 300 aaPredicted RBP12.79□□□□□ -0.36
PTPN20-203ENST00000374342 ZNF705BP0CI00 300 aaPredicted RBP12.79□□□□□ -0.36
PTPN20-203ENST00000374342 ZNF138P52744 262 aa12.79□□□□□ -0.36
PTPN20-203ENST00000374342 A0A1B0GUS0 222 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 LGALS9O00182 355 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 S100A8P05109 93 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 S100A2P29034 98 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 SLURP1P55000 103 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 HBBP68871 147 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 GDF5OSQ5U4N7 250 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 HIST2H2BDQ6DRA6 164 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 C9orf47Q6ZRZ4 202 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 C4orf3Q8WVX3 66 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 TMEM160Q9NX00 188 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 RNASE1P07998 156 aaKnown RBP12.78□□□□□ -0.36
PTPN20-203ENST00000374342 DEFB1P60022 68 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 KIAA1644Q3SXP7 199 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 COA6Q5JTJ3 125 aaKnown RBP12.78□□□□□ -0.36
PTPN20-203ENST00000374342 KLHL30-AS1Q8NEE0 82 aa12.78□□□□□ -0.36
PTPN20-203ENST00000374342 APCSP02743 223 aa12.77□□□□□ -0.37
PTPN20-203ENST00000374342 SLAQ13239 276 aa12.77□□□□□ -0.37
PTPN20-203ENST00000374342 ZNF418Q8TF45 676 aaPredicted RBP12.77□□□□□ -0.37
PTPN20-203ENST00000374342 TPPP3Q9BW30 176 aa12.77□□□□□ -0.37
PTPN20-203ENST00000374342 SSBP4Q9BWG4 385 aaPredicted RBP12.77□□□□□ -0.37
PTPN20-203ENST00000374342 LINC01619G3V211 115 aa12.76□□□□□ -0.37
PTPN20-203ENST00000374342 LY6G6DO95868 133 aa12.76□□□□□ -0.37
PTPN20-203ENST00000374342 CRISP2P16562 243 aa12.76□□□□□ -0.37
PTPN20-203ENST00000374342 PRR31Q5SQ13 230 aa12.76□□□□□ -0.37
PTPN20-203ENST00000374342 WFDC3Q8IUB2 231 aa12.76□□□□□ -0.37
PTPN20-203ENST00000374342 LINC00518Q8N0U6 118 aa12.76□□□□□ -0.37
PTPN20-203ENST00000374342 OR10J6PQ8NGY7 276 aa12.76□□□□□ -0.37
PTPN20-203ENST00000374342 DUX3Q96PT4 197 aa12.76□□□□□ -0.37
PTPN20-203ENST00000374342 ANK3Q12955 4377 aaKnown RBP12.76□□□□□ -0.37
PTPN20-203ENST00000374342 C2orf70A6NJV1 201 aa12.76□□□□□ -0.37
PTPN20-203ENST00000374342 OVOL1O14753 267 aa12.76□□□□□ -0.37
PTPN20-203ENST00000374342 FABP4P15090 132 aa12.76□□□□□ -0.37
PTPN20-203ENST00000374342 OR11H1Q8NG94 326 aa12.76□□□□□ -0.37
PTPN20-203ENST00000374342 ARMS2P0C7Q2 107 aa12.75□□□□□ -0.37
PTPN20-203ENST00000374342 TFPI2P48307 235 aa12.75□□□□□ -0.37
PTPN20-203ENST00000374342 HIST1H1AQ02539 215 aaPredicted RBP12.75□□□□□ -0.37
PTPN20-203ENST00000374342 DCANP1Q8TF63 244 aa12.75□□□□□ -0.37
PTPN20-203ENST00000374342 DPF1Q92782 380 aa12.75□□□□□ -0.37
PTPN20-203ENST00000374342 A0A1B0GUT8 65 aa12.74□□□□□ -0.37
PTPN20-203ENST00000374342 FABP5P3A8MUU1 101 aa12.74□□□□□ -0.37
PTPN20-203ENST00000374342 F6UB75 175 aa12.74□□□□□ -0.37
PTPN20-203ENST00000374342 ID1P41134 155 aa12.74□□□□□ -0.37
PTPN20-203ENST00000374342 KLF5Q13887 457 aaPredicted RBP12.74□□□□□ -0.37
PTPN20-203ENST00000374342 Q6AWC8 147 aa12.74□□□□□ -0.37
PTPN20-203ENST00000374342 C11orf44Q8N8P7 122 aa12.74□□□□□ -0.37
PTPN20-203ENST00000374342 MS4A6AQ9H2W1 248 aa12.74□□□□□ -0.37
PTPN20-203ENST00000374342 M0QZ24 198 aa12.74□□□□□ -0.37
PTPN20-203ENST00000374342 ORM1P02763 201 aa12.74□□□□□ -0.37
PTPN20-203ENST00000374342 SRIP30626 198 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms