RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 CT45A10P0DMU9 189 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 TSPOP30536 169 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 CDKN1BP46527 198 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 ERCC8Q13216 396 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 ZNF726P1Q15940 193 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 UQCC3Q6UW78 93 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 SSX7Q7RTT5 188 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 C1orf158Q8N1D5 194 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 Q8NAQ8 132 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 TMEM208Q9BTX3 173 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 C11orf68Q9H3H3 251 aaKnown RBP11.57□□□□□ -0.56
HDHD3-202ENST00000374180 OTORQ9NRC9 128 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 TMEM167BQ9NRX6 74 aa11.57□□□□□ -0.56
HDHD3-202ENST00000374180 IGKV2-40A0A087WW87 121 aaPredicted RBP11.56□□□□□ -0.56
HDHD3-202ENST00000374180 TEX46H3BTG2 121 aa11.56□□□□□ -0.56
HDHD3-202ENST00000374180 IGKV2D-40P01614 121 aaPredicted RBP11.56□□□□□ -0.56
HDHD3-202ENST00000374180 IQCF2Q8IXL9 164 aa11.56□□□□□ -0.56
HDHD3-202ENST00000374180 CMTM2Q8TAZ6 248 aa11.56□□□□□ -0.56
HDHD3-202ENST00000374180 RXFP4Q8TDU9 374 aa11.56□□□□□ -0.56
HDHD3-202ENST00000374180 NEU1Q99519 415 aa11.56□□□□□ -0.56
HDHD3-202ENST00000374180 TMA7Q9Y2S6 64 aaKnown RBP11.56□□□□□ -0.56
HDHD3-202ENST00000374180 SMIM9A6NGZ8 99 aa11.55□□□□□ -0.56
HDHD3-202ENST00000374180 UMAD1C9J7I0 102 aa11.55□□□□□ -0.56
HDHD3-202ENST00000374180 RBMY1A1P0DJD3 496 aaKnown RBP11.55□□□□□ -0.56
HDHD3-202ENST00000374180 RBMY1CP0DJD4 496 aa11.55□□□□□ -0.56
HDHD3-202ENST00000374180 RBMY1FQ15415 496 aaKnown RBP11.55□□□□□ -0.56
HDHD3-202ENST00000374180 TMEM78Q5T7P6 136 aa11.55□□□□□ -0.56
HDHD3-202ENST00000374180 C9orf47Q6ZRZ4 202 aa11.55□□□□□ -0.56
HDHD3-202ENST00000374180 ODF3Q96PU9 254 aa11.55□□□□□ -0.56
HDHD3-202ENST00000374180 AGPAT4-IT1Q9H0P7 198 aa11.55□□□□□ -0.56
HDHD3-202ENST00000374180 RAB19A4D1S5 217 aa11.54□□□□□ -0.56
HDHD3-202ENST00000374180 LEPP41159 167 aa11.54□□□□□ -0.56
HDHD3-202ENST00000374180 VGLL1Q99990 258 aa11.54□□□□□ -0.56
HDHD3-202ENST00000374180 PLA2G2EQ9NZK7 142 aa11.54□□□□□ -0.56
HDHD3-202ENST00000374180 CSMD3Q7Z407 3707 aa11.53□□□□□ -0.56
HDHD3-202ENST00000374180 DIRC3C9JPN6 131 aa11.53□□□□□ -0.56
HDHD3-202ENST00000374180 HBE1P02100 147 aa11.53□□□□□ -0.56
HDHD3-202ENST00000374180 FHITP49789 147 aa11.53□□□□□ -0.56
HDHD3-202ENST00000374180 FGF8P55075 233 aaPredicted RBP11.53□□□□□ -0.56
HDHD3-202ENST00000374180 ZFAND6Q6FIF0 208 aa11.53□□□□□ -0.56
HDHD3-202ENST00000374180 TMED6Q8WW62 240 aa11.53□□□□□ -0.56
HDHD3-202ENST00000374180 RBAKDNA6NC62 111 aa11.52□□□□□ -0.56
HDHD3-202ENST00000374180 MAP1LC3B2A6NCE7 125 aa11.52□□□□□ -0.56
HDHD3-202ENST00000374180 J3KRW8 73 aa11.52□□□□□ -0.56
HDHD3-202ENST00000374180 SLC25A5P05141 298 aaKnown RBP11.52□□□□□ -0.56
HDHD3-202ENST00000374180 KIR3DS1Q14943 382 aa11.52□□□□□ -0.56
HDHD3-202ENST00000374180 TMEM256Q8N2U0 113 aa11.52□□□□□ -0.56
HDHD3-202ENST00000374180 ARL6IP6Q8N6S5 226 aa11.52□□□□□ -0.56
HDHD3-202ENST00000374180 C11orf45Q8TAV5 145 aa11.52□□□□□ -0.56
HDHD3-202ENST00000374180 FAM213BQ8TBF2 198 aa11.52□□□□□ -0.56
HDHD3-202ENST00000374180 LINC01587Q99440 93 aa11.52□□□□□ -0.56
HDHD3-202ENST00000374180 MAP1LC3BQ9GZQ8 125 aa11.52□□□□□ -0.56
HDHD3-202ENST00000374180 TMPRSS5Q9H3S3 457 aa11.52□□□□□ -0.56
HDHD3-202ENST00000374180 RPH3ALQ9UNE2 315 aa11.52□□□□□ -0.56
HDHD3-202ENST00000374180 RAB5CP51148 216 aa11.51□□□□□ -0.57
HDHD3-202ENST00000374180 ZNF138P52744 262 aa11.51□□□□□ -0.57
HDHD3-202ENST00000374180 RRN3P1Q2M238 152 aa11.51□□□□□ -0.57
HDHD3-202ENST00000374180 CASC10Q5T4H9 136 aa11.51□□□□□ -0.57
HDHD3-202ENST00000374180 GFI1BQ5VTD9 330 aa11.51□□□□□ -0.57
HDHD3-202ENST00000374180 TMEM189A5PLL7 270 aa11.51□□□□□ -0.57
HDHD3-202ENST00000374180 EMP1P54849 157 aa11.51□□□□□ -0.57
HDHD3-202ENST00000374180 SUMO1P63165 101 aaKnown RBP11.51□□□□□ -0.57
HDHD3-202ENST00000374180 DPPA3Q6W0C5 159 aa11.51□□□□□ -0.57
HDHD3-202ENST00000374180 SFT2D1Q8WV19 159 aa11.51□□□□□ -0.57
HDHD3-202ENST00000374180 FAM19A4Q96LR4 140 aa11.51□□□□□ -0.57
HDHD3-202ENST00000374180 C20orf144Q9BQM9 153 aa11.51□□□□□ -0.57
HDHD3-202ENST00000374180 ZNF492Q9P255 531 aa11.51□□□□□ -0.57
HDHD3-202ENST00000374180 LOC102723971A0A1B0GUV8 181 aa11.5□□□□□ -0.57
HDHD3-202ENST00000374180 A0A1W2PRE2 83 aa11.5□□□□□ -0.57
HDHD3-202ENST00000374180 CXorf65A6NEN9 183 aa11.5□□□□□ -0.57
HDHD3-202ENST00000374180 ZNF705GA8MUZ8 300 aaPredicted RBP11.5□□□□□ -0.57
HDHD3-202ENST00000374180 GOLT1AQ6ZVE7 132 aa11.5□□□□□ -0.57
HDHD3-202ENST00000374180 C5orf17Q8NAS9 161 aa11.5□□□□□ -0.57
HDHD3-202ENST00000374180 TENM2Q9NT68 2774 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 TRAV12-3A0A0B4J271 114 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 H7BYZ3 331 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 SCO1O75880 301 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 PRM2P04554 102 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 GPX1P07203 203 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 HTN1P15515 57 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 CRISP2P16562 243 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 RNASE4P34096 147 aaKnown RBP11.49□□□□□ -0.57
HDHD3-202ENST00000374180 SULT1A2P50226 295 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 TAS2R60P59551 318 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 NANOS2P60321 138 aaKnown RBP11.49□□□□□ -0.57
HDHD3-202ENST00000374180 UBE2G2P60604 165 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 GNG5P63218 68 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 PMS2P11Q13670 270 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 Q8TAT8 98 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 MBD3L1Q8WWY6 194 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 NIPSNAP3BQ9BS92 247 aa11.49□□□□□ -0.57
HDHD3-202ENST00000374180 TRBV7-9A0A0J9YWB2 115 aa11.48□□□□□ -0.57
HDHD3-202ENST00000374180 C7orf71A4D174 169 aa11.48□□□□□ -0.57
HDHD3-202ENST00000374180 KLLNB2CW77 178 aa11.48□□□□□ -0.57
HDHD3-202ENST00000374180 GGTLC3B5MD39 225 aa11.48□□□□□ -0.57
HDHD3-202ENST00000374180 H2AFB1P0C5Y9 115 aa11.48□□□□□ -0.57
HDHD3-202ENST00000374180 BLOC1S1P78537 153 aa11.48□□□□□ -0.57
HDHD3-202ENST00000374180 EPDR1Q9UM22 224 aa11.48□□□□□ -0.57
HDHD3-202ENST00000374180 YTHDF2Q9Y5A9 579 aaKnown RBP11.48□□□□□ -0.57
HDHD3-202ENST00000374180 SERTM2A0A1B0GWG4 89 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms