RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 YLPM1P49750 1951 aaKnown RBP11.51□□□□□ -0.57
TRAF1-201ENST00000373887 TRAV12-2A0A075B6T6 113 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 A0A1B0GW64 132 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 ATP6V0E1O15342 81 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 NMSQ5H8A3 153 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 TP53BP1Q12888 1972 aaPredicted RBP11.5□□□□□ -0.57
TRAF1-201ENST00000373887 TRAV1-1A0A0B4J248 108 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 NDUFS7O75251 213 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 IGFL3Q6UXB1 125 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 NRGNQ92686 78 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 ATP6V0BQ99437 205 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 ZNF503-AS2A6NEH8 195 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 FGF6P10767 208 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 G3V318 75 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 I3L3M4 83 aa11.5□□□□□ -0.57
TRAF1-201ENST00000373887 IGHV1-69DA0A0B4J2H0 117 aa11.49□□□□□ -0.57
TRAF1-201ENST00000373887 C15orf62A8K5M9 175 aa11.49□□□□□ -0.57
TRAF1-201ENST00000373887 IGHV1-69P01742 117 aa11.49□□□□□ -0.57
TRAF1-201ENST00000373887 INAFM2P0DMQ5 153 aa11.49□□□□□ -0.57
TRAF1-201ENST00000373887 RNASE13Q5GAN3 156 aaKnown RBP11.49□□□□□ -0.57
TRAF1-201ENST00000373887 POLR3KQ9Y2Y1 108 aaPredicted RBP11.49□□□□□ -0.57
TRAF1-201ENST00000373887 IGFBPL1Q8WX77 278 aa11.49□□□□□ -0.57
TRAF1-201ENST00000373887 IGHG4P01861 327 aa11.49□□□□□ -0.57
TRAF1-201ENST00000373887 MPDZO75970 2070 aa11.49□□□□□ -0.57
TRAF1-201ENST00000373887 PRSS29PA6NIE9 313 aa11.49□□□□□ -0.57
TRAF1-201ENST00000373887 ZNRF2Q8NHG8 242 aa11.49□□□□□ -0.57
TRAF1-201ENST00000373887 LHFPL1Q86WI0 220 aa11.49□□□□□ -0.57
TRAF1-201ENST00000373887 RNASE2P10153 161 aaKnown RBP11.48□□□□□ -0.57
TRAF1-201ENST00000373887 IFITM1P13164 125 aa11.48□□□□□ -0.57
TRAF1-201ENST00000373887 C2orf66Q6UXQ4 117 aa11.48□□□□□ -0.57
TRAF1-201ENST00000373887 GPR179Q6PRD1 2367 aa11.48□□□□□ -0.57
TRAF1-201ENST00000373887 TANC1Q9C0D5 1861 aa11.48□□□□□ -0.57
TRAF1-201ENST00000373887 LYPD1Q8N2G4 141 aa11.48□□□□□ -0.57
TRAF1-201ENST00000373887 FAM215AQ9Y5M1 114 aa11.48□□□□□ -0.57
TRAF1-201ENST00000373887 OOSP1A8MZH6 123 aa11.48□□□□□ -0.57
TRAF1-201ENST00000373887 A0A0G2JRQ6 117 aa11.48□□□□□ -0.57
TRAF1-201ENST00000373887 RNF5Q99942 180 aa11.48□□□□□ -0.57
TRAF1-201ENST00000373887 SHANK2-AS3Q9BTD1 123 aa11.47□□□□□ -0.57
TRAF1-201ENST00000373887 REG4Q9BYZ8 158 aa11.47□□□□□ -0.57
TRAF1-201ENST00000373887 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.47□□□□□ -0.57
TRAF1-201ENST00000373887 TMEM141Q96I45 108 aa11.47□□□□□ -0.57
TRAF1-201ENST00000373887 LY96Q9Y6Y9 160 aa11.47□□□□□ -0.57
TRAF1-201ENST00000373887 IGHV2-70DA0A0C4DH43 119 aa11.47□□□□□ -0.57
TRAF1-201ENST00000373887 ASPHD1Q5U4P2 390 aa11.47□□□□□ -0.57
TRAF1-201ENST00000373887 CACNA1DQ01668 2161 aa11.47□□□□□ -0.57
TRAF1-201ENST00000373887 FAM120AOSQ5T036 256 aa11.46□□□□□ -0.57
TRAF1-201ENST00000373887 Q6ZR03 302 aa11.46□□□□□ -0.57
TRAF1-201ENST00000373887 LINC01619G3V211 115 aa11.46□□□□□ -0.57
TRAF1-201ENST00000373887 CRYGCP07315 174 aa11.46□□□□□ -0.57
TRAF1-201ENST00000373887 UBE2E1P51965 193 aa11.46□□□□□ -0.57
TRAF1-201ENST00000373887 CARD19Q96LW7 228 aa11.46□□□□□ -0.57
TRAF1-201ENST00000373887 SRSF8Q9BRL6 282 aaKnown RBP11.46□□□□□ -0.57
TRAF1-201ENST00000373887 DOCK9Q9BZ29 2069 aa11.46□□□□□ -0.57
TRAF1-201ENST00000373887 PTPRDP23468 1912 aa11.46□□□□□ -0.57
TRAF1-201ENST00000373887 K7ERJ3 54 aa11.46□□□□□ -0.57
TRAF1-201ENST00000373887 HLA-DRB4P13762 266 aa11.46□□□□□ -0.57
TRAF1-201ENST00000373887 HLA-DRB4X5D2U9 266 aa11.46□□□□□ -0.57
TRAF1-201ENST00000373887 TMEM75Q8N9X5 138 aa11.46□□□□□ -0.58
TRAF1-201ENST00000373887 TMEM243Q9BU79 118 aa11.46□□□□□ -0.58
TRAF1-201ENST00000373887 HELZP42694 1942 aaKnown RBP11.46□□□□□ -0.58
TRAF1-201ENST00000373887 IGHV4-4A0A075B6R2 117 aa11.46□□□□□ -0.58
TRAF1-201ENST00000373887 RBM3P98179 157 aaKnown RBP11.46□□□□□ -0.58
TRAF1-201ENST00000373887 GFRA4Q9GZZ7 299 aa11.46□□□□□ -0.58
TRAF1-201ENST00000373887 DOCK7Q96N67 2140 aa11.45□□□□□ -0.58
TRAF1-201ENST00000373887 C22orf46C9J442 243 aa11.45□□□□□ -0.58
TRAF1-201ENST00000373887 SMIM2Q9BVW6 85 aa11.45□□□□□ -0.58
TRAF1-201ENST00000373887 IGKV1-39P01597 117 aa11.45□□□□□ -0.58
TRAF1-201ENST00000373887 IGKV1D-39P04432 117 aa11.45□□□□□ -0.58
TRAF1-201ENST00000373887 SLAQ13239 276 aa11.45□□□□□ -0.58
TRAF1-201ENST00000373887 Q8N8P6 123 aa11.45□□□□□ -0.58
TRAF1-201ENST00000373887 TSC2P49815 1807 aa11.45□□□□□ -0.58
TRAF1-201ENST00000373887 C9orf118A6NHY6 69 aa11.45□□□□□ -0.58
TRAF1-201ENST00000373887 UTF1Q5T230 341 aa11.45□□□□□ -0.58
TRAF1-201ENST00000373887 PPDPFLQ8WWR9 84 aa11.45□□□□□ -0.58
TRAF1-201ENST00000373887 ZNF524Q96C55 264 aa11.45□□□□□ -0.58
TRAF1-201ENST00000373887 VWC2Q2TAL6 325 aa11.44□□□□□ -0.58
TRAF1-201ENST00000373887 IGF2BP2-AS1Q96M15 143 aa11.44□□□□□ -0.58
TRAF1-201ENST00000373887 A0A1W2PPI3 338 aa11.44□□□□□ -0.58
TRAF1-201ENST00000373887 PFN1P07737 140 aaKnown RBP11.44□□□□□ -0.58
TRAF1-201ENST00000373887 NDUFA12Q9UI09 145 aa11.44□□□□□ -0.58
TRAF1-201ENST00000373887 CT83Q5H943 113 aa11.44□□□□□ -0.58
TRAF1-201ENST00000373887 TMEM190Q8WZ59 177 aa11.44□□□□□ -0.58
TRAF1-201ENST00000373887 UBE2BP63146 152 aa11.43□□□□□ -0.58
TRAF1-201ENST00000373887 ETDBQ3ZM63 59 aa11.43□□□□□ -0.58
TRAF1-201ENST00000373887 CYYR1Q96J86 154 aa11.43□□□□□ -0.58
TRAF1-201ENST00000373887 TRBV20-1A0A075B6N2 111 aa11.43□□□□□ -0.58
TRAF1-201ENST00000373887 PRSS46E5RG02 174 aa11.43□□□□□ -0.58
TRAF1-201ENST00000373887 ANGP03950 147 aaKnown RBP11.43□□□□□ -0.58
TRAF1-201ENST00000373887 GATA3P23771 443 aa11.43□□□□□ -0.58
TRAF1-201ENST00000373887 MRPL51Q4U2R6 128 aaKnown RBP11.43□□□□□ -0.58
TRAF1-201ENST00000373887 SDHAF1A6NFY7 115 aa11.43□□□□□ -0.58
TRAF1-201ENST00000373887 WIPF3A6NGB9 483 aa11.43□□□□□ -0.58
TRAF1-201ENST00000373887 C18orf32Q8TCD1 76 aa11.43□□□□□ -0.58
TRAF1-201ENST00000373887 NDUFB8O95169 186 aa11.42□□□□□ -0.58
TRAF1-201ENST00000373887 CRYBA4P53673 196 aa11.42□□□□□ -0.58
TRAF1-201ENST00000373887 IGHV1OR15-1A0A075B7D0 117 aa11.42□□□□□ -0.58
TRAF1-201ENST00000373887 ADCYAP1P18509 176 aa11.42□□□□□ -0.58
TRAF1-201ENST00000373887 IGHV4-28A0A0C4DH34 117 aa11.42□□□□□ -0.58
TRAF1-201ENST00000373887 FAM104BQ5XKR9 115 aa11.42□□□□□ -0.58
TRAF1-201ENST00000373887 Q6ZRM9 215 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms