RNA–Protein interactions for RNA: ENST00000373492.6

PBX3-205, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-205ENST00000373492 CASC10Q5T4H9 136 aa13.33□□□□□ -0.28
PBX3-205ENST00000373492 C9orf47Q6ZRZ4 202 aa13.33□□□□□ -0.28
PBX3-205ENST00000373492 IGF2BP2-AS1Q96M15 143 aa13.33□□□□□ -0.28
PBX3-205ENST00000373492 ODF3Q96PU9 254 aa13.33□□□□□ -0.28
PBX3-205ENST00000373492 GOLT1BQ9Y3E0 138 aa13.33□□□□□ -0.28
PBX3-205ENST00000373492 KMT2CQ8NEZ4 4911 aaKnown RBP13.32□□□□□ -0.28
PBX3-205ENST00000373492 SUMO1P63165 101 aaKnown RBP13.32□□□□□ -0.28
PBX3-205ENST00000373492 C5orf17Q8NAS9 161 aa13.32□□□□□ -0.28
PBX3-205ENST00000373492 TMEM208Q9BTX3 173 aa13.32□□□□□ -0.28
PBX3-205ENST00000373492 NKX6-2Q9C056 277 aaPredicted RBP13.32□□□□□ -0.28
PBX3-205ENST00000373492 AGPAT4-IT1Q9H0P7 198 aa13.32□□□□□ -0.28
PBX3-205ENST00000373492 TRAV12-2A0A075B6T6 113 aa13.31□□□□□ -0.28
PBX3-205ENST00000373492 IGHV3OR16-12A0A075B7B8 117 aa13.31□□□□□ -0.28
PBX3-205ENST00000373492 ZNF705EA8MWA4 302 aaPredicted RBP13.31□□□□□ -0.28
PBX3-205ENST00000373492 TEX46H3BTG2 121 aa13.31□□□□□ -0.28
PBX3-205ENST00000373492 CT45A10P0DMU9 189 aa13.31□□□□□ -0.28
PBX3-205ENST00000373492 MIFP14174 115 aa13.31□□□□□ -0.28
PBX3-205ENST00000373492 UBE2G2P60604 165 aa13.31□□□□□ -0.28
PBX3-205ENST00000373492 VGLL1Q99990 258 aa13.31□□□□□ -0.28
PBX3-205ENST00000373492 SERTM2A0A1B0GWG4 89 aa13.3□□□□□ -0.28
PBX3-205ENST00000373492 K7EQM0 130 aa13.3□□□□□ -0.28
PBX3-205ENST00000373492 CRXO43186 299 aaPredicted RBP13.3□□□□□ -0.28
PBX3-205ENST00000373492 ZNF705AQ6ZN79 300 aaPredicted RBP13.3□□□□□ -0.28
PBX3-205ENST00000373492 A0A0J9YWU9 116 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 A0A1B0GV50 99 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 SMIM9A6NGZ8 99 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 FAM74A7A6NL05 159 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 GGTLC3B5MD39 225 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 HBE1P02100 147 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 PPT1P50897 306 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 ZNF138P52744 262 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 GOLT1AQ6ZVE7 132 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 TMEM256Q8N2U0 113 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 NEU1Q99519 415 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 C20orf144Q9BQM9 153 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 ZNF492Q9P255 531 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 BOLA1Q9Y3E2 137 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 ARL2-SNX15V9GYD0 113 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 X6R8D5 127 aa13.29□□□□□ -0.28
PBX3-205ENST00000373492 J3KRW8 73 aa13.28□□□□□ -0.28
PBX3-205ENST00000373492 IFNA7P01567 189 aa13.28□□□□□ -0.28
PBX3-205ENST00000373492 GNG5P63218 68 aa13.28□□□□□ -0.28
PBX3-205ENST00000373492 ALKAL2Q6UX46 152 aa13.28□□□□□ -0.28
PBX3-205ENST00000373492 C1orf158Q8N1D5 194 aa13.28□□□□□ -0.28
PBX3-205ENST00000373492 EPDR1Q9UM22 224 aa13.28□□□□□ -0.28
PBX3-205ENST00000373492 YTHDF2Q9Y5A9 579 aaKnown RBP13.28□□□□□ -0.28
PBX3-205ENST00000373492 TRBV7-9A0A0J9YWB2 115 aa13.27□□□□□ -0.29
PBX3-205ENST00000373492 TCRAP04437 139 aa13.27□□□□□ -0.29
PBX3-205ENST00000373492 GPX1P07203 203 aa13.27□□□□□ -0.29
PBX3-205ENST00000373492 CRISP2P16562 243 aa13.27□□□□□ -0.29
PBX3-205ENST00000373492 CST9LP1Q5W188 147 aa13.27□□□□□ -0.29
PBX3-205ENST00000373492 ZFAND6Q6FIF0 208 aa13.27□□□□□ -0.29
PBX3-205ENST00000373492 FAM19A4Q96LR4 140 aa13.27□□□□□ -0.29
PBX3-205ENST00000373492 C11orf68Q9H3H3 251 aaKnown RBP13.27□□□□□ -0.29
PBX3-205ENST00000373492 LENEPQ9Y5L5 61 aa13.27□□□□□ -0.29
PBX3-205ENST00000373492 STARD9Q9P2P6 4700 aa13.27□□□□□ -0.29
PBX3-205ENST00000373492 TRAV1-1A0A0B4J248 108 aa13.26□□□□□ -0.29
PBX3-205ENST00000373492 NMBP08949 121 aa13.26□□□□□ -0.29
PBX3-205ENST00000373492 GFI1BQ5VTD9 330 aa13.26□□□□□ -0.29
PBX3-205ENST00000373492 CSMD3Q7Z407 3707 aa13.26□□□□□ -0.29
PBX3-205ENST00000373492 CYB561D1Q8N8Q1 229 aa13.26□□□□□ -0.29
PBX3-205ENST00000373492 Q8NAQ8 132 aa13.26□□□□□ -0.29
PBX3-205ENST00000373492 Q8TAT8 98 aa13.26□□□□□ -0.29
PBX3-205ENST00000373492 LINC01587Q99440 93 aa13.26□□□□□ -0.29
PBX3-205ENST00000373492 ATG101Q9BSB4 218 aa13.26□□□□□ -0.29
PBX3-205ENST00000373492 IGHV4-28A0A0C4DH34 117 aa13.25□□□□□ -0.29
PBX3-205ENST00000373492 F6UZH7 168 aa13.25□□□□□ -0.29
PBX3-205ENST00000373492 PAGE4O60829 102 aa13.25□□□□□ -0.29
PBX3-205ENST00000373492 RRN3P1Q2M238 152 aa13.25□□□□□ -0.29
PBX3-205ENST00000373492 TCEAL7Q9BRU2 100 aa13.25□□□□□ -0.29
PBX3-205ENST00000373492 NIPSNAP3BQ9BS92 247 aa13.25□□□□□ -0.29
PBX3-205ENST00000373492 TRAV12-3A0A0B4J271 114 aa13.24□□□□□ -0.29
PBX3-205ENST00000373492 C7orf71A4D174 169 aa13.24□□□□□ -0.29
PBX3-205ENST00000373492 FBLL1A6NHQ2 334 aaKnown RBP13.24□□□□□ -0.29
PBX3-205ENST00000373492 KLLNB2CW77 178 aa13.24□□□□□ -0.29
PBX3-205ENST00000373492 DEFB4AO15263 64 aa13.24□□□□□ -0.29
PBX3-205ENST00000373492 BLOC1S1P78537 153 aa13.24□□□□□ -0.29
PBX3-205ENST00000373492 KIR3DS1Q14943 382 aa13.24□□□□□ -0.29
PBX3-205ENST00000373492 HIST1H2BAQ96A08 127 aa13.24□□□□□ -0.29
PBX3-205ENST00000373492 NDFIP1Q9BT67 221 aa13.24□□□□□ -0.29
PBX3-205ENST00000373492 MANBALQ9NQG1 85 aa13.24□□□□□ -0.29
PBX3-205ENST00000373492 TMEM189A5PLL7 270 aa13.23□□□□□ -0.29
PBX3-205ENST00000373492 H7BYZ3 331 aa13.23□□□□□ -0.29
PBX3-205ENST00000373492 PEX7O00628 323 aa13.23□□□□□ -0.29
PBX3-205ENST00000373492 RBMY1A1P0DJD3 496 aaKnown RBP13.23□□□□□ -0.29
PBX3-205ENST00000373492 RBMY1CP0DJD4 496 aa13.23□□□□□ -0.29
PBX3-205ENST00000373492 RNASE4P34096 147 aaKnown RBP13.23□□□□□ -0.29
PBX3-205ENST00000373492 RBMY1FQ15415 496 aaKnown RBP13.23□□□□□ -0.29
PBX3-205ENST00000373492 TMEM75Q8N9X5 138 aa13.23□□□□□ -0.29
PBX3-205ENST00000373492 TRAV8-1A0A0A6YYK1 113 aa13.22□□□□□ -0.29
PBX3-205ENST00000373492 IFNA1P01562 189 aa13.22□□□□□ -0.29
PBX3-205ENST00000373492 ATP5G3P48201 142 aa13.22□□□□□ -0.29
PBX3-205ENST00000373492 TAS2R60P59551 318 aa13.22□□□□□ -0.29
PBX3-205ENST00000373492 BTN1A1Q13410 526 aa13.22□□□□□ -0.29
PBX3-205ENST00000373492 ZFAND2AQ8N6M9 145 aa13.22□□□□□ -0.29
PBX3-205ENST00000373492 GNG13Q9P2W3 67 aa13.22□□□□□ -0.29
PBX3-205ENST00000373492 LOC102723971A0A1B0GUV8 181 aa13.21□□□□□ -0.29
PBX3-205ENST00000373492 ZNF705GA8MUZ8 300 aaPredicted RBP13.21□□□□□ -0.29
PBX3-205ENST00000373492 HTN1P15515 57 aa13.21□□□□□ -0.29
PBX3-205ENST00000373492 CCL20P78556 96 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms