RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 TMEM208Q9BTX3 173 aa13.32□□□□□ -0.28
PBX3-202ENST00000373482 NKX6-2Q9C056 277 aaPredicted RBP13.32□□□□□ -0.28
PBX3-202ENST00000373482 AGPAT4-IT1Q9H0P7 198 aa13.32□□□□□ -0.28
PBX3-202ENST00000373482 TRAV12-2A0A075B6T6 113 aa13.31□□□□□ -0.28
PBX3-202ENST00000373482 IGHV3OR16-12A0A075B7B8 117 aa13.31□□□□□ -0.28
PBX3-202ENST00000373482 ZNF705EA8MWA4 302 aaPredicted RBP13.31□□□□□ -0.28
PBX3-202ENST00000373482 TEX46H3BTG2 121 aa13.31□□□□□ -0.28
PBX3-202ENST00000373482 CT45A10P0DMU9 189 aa13.31□□□□□ -0.28
PBX3-202ENST00000373482 MIFP14174 115 aa13.31□□□□□ -0.28
PBX3-202ENST00000373482 UBE2G2P60604 165 aa13.31□□□□□ -0.28
PBX3-202ENST00000373482 VGLL1Q99990 258 aa13.31□□□□□ -0.28
PBX3-202ENST00000373482 SERTM2A0A1B0GWG4 89 aa13.3□□□□□ -0.28
PBX3-202ENST00000373482 K7EQM0 130 aa13.3□□□□□ -0.28
PBX3-202ENST00000373482 CRXO43186 299 aaPredicted RBP13.3□□□□□ -0.28
PBX3-202ENST00000373482 ZNF705AQ6ZN79 300 aaPredicted RBP13.3□□□□□ -0.28
PBX3-202ENST00000373482 A0A0J9YWU9 116 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 A0A1B0GV50 99 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 SMIM9A6NGZ8 99 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 FAM74A7A6NL05 159 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 GGTLC3B5MD39 225 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 HBE1P02100 147 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 PPT1P50897 306 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 ZNF138P52744 262 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 GOLT1AQ6ZVE7 132 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 TMEM256Q8N2U0 113 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 NEU1Q99519 415 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 C20orf144Q9BQM9 153 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 EDA2RQ9HAV5 297 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 ZNF492Q9P255 531 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 BOLA1Q9Y3E2 137 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 ARL2-SNX15V9GYD0 113 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 X6R8D5 127 aa13.29□□□□□ -0.28
PBX3-202ENST00000373482 J3KRW8 73 aa13.28□□□□□ -0.28
PBX3-202ENST00000373482 IFNA7P01567 189 aa13.28□□□□□ -0.28
PBX3-202ENST00000373482 GNG5P63218 68 aa13.28□□□□□ -0.28
PBX3-202ENST00000373482 ALKAL2Q6UX46 152 aa13.28□□□□□ -0.28
PBX3-202ENST00000373482 C1orf158Q8N1D5 194 aa13.28□□□□□ -0.28
PBX3-202ENST00000373482 EPDR1Q9UM22 224 aa13.28□□□□□ -0.28
PBX3-202ENST00000373482 YTHDF2Q9Y5A9 579 aaKnown RBP13.28□□□□□ -0.28
PBX3-202ENST00000373482 TRBV7-9A0A0J9YWB2 115 aa13.27□□□□□ -0.29
PBX3-202ENST00000373482 TCRAP04437 139 aa13.27□□□□□ -0.29
PBX3-202ENST00000373482 GPX1P07203 203 aa13.27□□□□□ -0.29
PBX3-202ENST00000373482 CRISP2P16562 243 aa13.27□□□□□ -0.29
PBX3-202ENST00000373482 CST9LP1Q5W188 147 aa13.27□□□□□ -0.29
PBX3-202ENST00000373482 FAM19A4Q96LR4 140 aa13.27□□□□□ -0.29
PBX3-202ENST00000373482 C11orf68Q9H3H3 251 aaKnown RBP13.27□□□□□ -0.29
PBX3-202ENST00000373482 LENEPQ9Y5L5 61 aa13.27□□□□□ -0.29
PBX3-202ENST00000373482 TRAV1-1A0A0B4J248 108 aa13.26□□□□□ -0.29
PBX3-202ENST00000373482 NMBP08949 121 aa13.26□□□□□ -0.29
PBX3-202ENST00000373482 GFI1BQ5VTD9 330 aa13.26□□□□□ -0.29
PBX3-202ENST00000373482 CYB561D1Q8N8Q1 229 aa13.26□□□□□ -0.29
PBX3-202ENST00000373482 Q8NAQ8 132 aa13.26□□□□□ -0.29
PBX3-202ENST00000373482 Q8TAT8 98 aa13.26□□□□□ -0.29
PBX3-202ENST00000373482 STAB2Q8WWQ8 2551 aa13.26□□□□□ -0.29
PBX3-202ENST00000373482 LINC01587Q99440 93 aa13.26□□□□□ -0.29
PBX3-202ENST00000373482 ATG101Q9BSB4 218 aa13.26□□□□□ -0.29
PBX3-202ENST00000373482 IGHV4-28A0A0C4DH34 117 aa13.25□□□□□ -0.29
PBX3-202ENST00000373482 F6UZH7 168 aa13.25□□□□□ -0.29
PBX3-202ENST00000373482 PAGE4O60829 102 aa13.25□□□□□ -0.29
PBX3-202ENST00000373482 RRN3P1Q2M238 152 aa13.25□□□□□ -0.29
PBX3-202ENST00000373482 TCEAL7Q9BRU2 100 aa13.25□□□□□ -0.29
PBX3-202ENST00000373482 NIPSNAP3BQ9BS92 247 aa13.25□□□□□ -0.29
PBX3-202ENST00000373482 TRAV12-3A0A0B4J271 114 aa13.24□□□□□ -0.29
PBX3-202ENST00000373482 C7orf71A4D174 169 aa13.24□□□□□ -0.29
PBX3-202ENST00000373482 FBLL1A6NHQ2 334 aaKnown RBP13.24□□□□□ -0.29
PBX3-202ENST00000373482 KLLNB2CW77 178 aa13.24□□□□□ -0.29
PBX3-202ENST00000373482 DEFB4AO15263 64 aa13.24□□□□□ -0.29
PBX3-202ENST00000373482 BLOC1S1P78537 153 aa13.24□□□□□ -0.29
PBX3-202ENST00000373482 KIR3DS1Q14943 382 aa13.24□□□□□ -0.29
PBX3-202ENST00000373482 IL17DQ8TAD2 202 aa13.24□□□□□ -0.29
PBX3-202ENST00000373482 HIST1H2BAQ96A08 127 aa13.24□□□□□ -0.29
PBX3-202ENST00000373482 NDFIP1Q9BT67 221 aa13.24□□□□□ -0.29
PBX3-202ENST00000373482 MANBALQ9NQG1 85 aa13.24□□□□□ -0.29
PBX3-202ENST00000373482 TMEM189A5PLL7 270 aa13.23□□□□□ -0.29
PBX3-202ENST00000373482 H7BYZ3 331 aa13.23□□□□□ -0.29
PBX3-202ENST00000373482 PEX7O00628 323 aa13.23□□□□□ -0.29
PBX3-202ENST00000373482 RBMY1A1P0DJD3 496 aaKnown RBP13.23□□□□□ -0.29
PBX3-202ENST00000373482 RBMY1CP0DJD4 496 aa13.23□□□□□ -0.29
PBX3-202ENST00000373482 RNASE4P34096 147 aaKnown RBP13.23□□□□□ -0.29
PBX3-202ENST00000373482 RBMY1FQ15415 496 aaKnown RBP13.23□□□□□ -0.29
PBX3-202ENST00000373482 TMEM75Q8N9X5 138 aa13.23□□□□□ -0.29
PBX3-202ENST00000373482 TRAV8-1A0A0A6YYK1 113 aa13.22□□□□□ -0.29
PBX3-202ENST00000373482 IFNA1P01562 189 aa13.22□□□□□ -0.29
PBX3-202ENST00000373482 ATP5G3P48201 142 aa13.22□□□□□ -0.29
PBX3-202ENST00000373482 TAS2R60P59551 318 aa13.22□□□□□ -0.29
PBX3-202ENST00000373482 BTN1A1Q13410 526 aa13.22□□□□□ -0.29
PBX3-202ENST00000373482 ZFAND2AQ8N6M9 145 aa13.22□□□□□ -0.29
PBX3-202ENST00000373482 GNG13Q9P2W3 67 aa13.22□□□□□ -0.29
PBX3-202ENST00000373482 LOC102723971A0A1B0GUV8 181 aa13.21□□□□□ -0.29
PBX3-202ENST00000373482 ZNF705GA8MUZ8 300 aaPredicted RBP13.21□□□□□ -0.29
PBX3-202ENST00000373482 HTN1P15515 57 aa13.21□□□□□ -0.29
PBX3-202ENST00000373482 CCL20P78556 96 aa13.21□□□□□ -0.29
PBX3-202ENST00000373482 FLI1Q01543 452 aaPredicted RBP13.21□□□□□ -0.29
PBX3-202ENST00000373482 CCDC28AQ8IWP9 274 aa13.21□□□□□ -0.29
PBX3-202ENST00000373482 MUC7Q8TAX7 377 aa13.21□□□□□ -0.29
PBX3-202ENST00000373482 SGK494Q96LW2 274 aa13.21□□□□□ -0.29
PBX3-202ENST00000373482 TREM1Q9NP99 234 aa13.21□□□□□ -0.29
PBX3-202ENST00000373482 PSG8Q9UQ74 426 aa13.21□□□□□ -0.29
PBX3-202ENST00000373482 C11orf94C9JXX5 98 aa13.2□□□□□ -0.3
PBX3-202ENST00000373482 PRNTQ86SH4 94 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms